Dsuc012369.1
Basic Information
- Insect
- Drosophila sucinea
- Gene Symbol
- bab2
- Assembly
- GCA_018150745.1
- Location
- JAECWP010000001.1:12337766-12339964[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-12 1.1e-08 34.6 0.1 1 44 426 469 426 470 0.91 2 2 2.3 5.1e+03 -2.7 0.9 4 20 568 583 568 583 0.86
Sequence Information
- Coding Sequence
- ATGGGCGGAGGAGGTGGGCCCACACCCACTCCGGTAGCCAGCAGTGAGGGACAAACGTATTGCCTACGCTGGAATAATCATCAAACGAATTTGGTACAGATCCTCCATGCGCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTGGTGGATGATGAACAATTTAAGGCCCATCGTGTGGTATTGGCCGCCAATTCGCCATATTTCCAGCATATATTGCAAGATGTGCCACAGGATCATTGTAGCATCATATTGCCGGGTGTCAAGGGATTCGAAATCGCGGCCCTCCTGCAATATATGTATACGGGTGAGACGACGGTGACCAAGACGCAGGAGCCGGAAATATTGCGTACCGCAAAAGAGCTGCAGGTCAAAGGTCTCTATGATAATCTAATGAAATTCAATAACAACAAGCAGACGGGAGGAGGAGCGAGCGGTGCATCGGCTGGTGCGGCAGCGGAGGAGCGTATTCAGAGTCATTATCATGCTAGTAGTGTGGCTCCCACATCCAGTTCCAGTCACAAGCCACAGAATGGTGATTCCTATGGCCACCATCAGCAGCATCCCCATCCTCATCATCCTCTGCCACCATCGACGCATCACAATTCCTCCTCATCGGTGATCTCAACGTCCACACATATCTCGCCCAGTGCCGCCATTTCGAGCAGCTGCTCGCCCCCACCCCCAGCATTTGGAGGCTATCAACAGACACCGTATTCCAATTATGGTCCATCCGGAGCAAATCATTCACATATTCCAGCCGGCGAGACGCCATTGACTCCCACCCATGCGACACCACATGGTCCTGGAGCTGGAGAGGCTGCTGGTCAGTGGCCACTTTCTCCCTCTGCTGCCGCCGCTGCCATGTTGAATTCGGTTTATGAGTCTGCCGCCGATATGAATCCTCTCAAGCGCAAGAAACTCTCGGCCATATCGAGCATGTTGCTCAATAGTACACGGGACACGCCCATTTTGCGTAATGTTTTGGCCCAGGCTAATCCCGCCGACTCTTCGCAATCCCAGCAACCGAATCCTTTGCTCCTCAAGAGTTCTTCCTCCTCCTCGTTGGCGGAGAAGACGACACCCCATCAGAGCGGAGGGGGAGGCGGAGGTGGAGGGGGCATTGGTGGAGGCACTGGTAGCCACAGTTTCAATGGCTCCGACTACGGCGGCGACAAGGAACCCCTCTCGCCGCACACCGATCGCTCGTTCGACGAGGAGACCGGAGGTCCTGGCGGCAAGAAACCGGAATGGAAGCGCTACAAGCAATACACCCGTGCCGACATGATGTGTGCCATCCAGGCGGTCCGTGAGGGCATGAGTGCCCTGCAGGCGAGTCGCAAATACGGTCTGCCCAGCAGGACACTCTACGATAAGGTGCGCAAGCTGAATATCACCACCGGACGCGGCACCCATCGCACTCCCAAGCGCAGTCCACCCGGTGTGGAGTCGTCGGCTGCCTTCCCCTATTCCGCCGCTGCGGCAGCTGCCGCCGCCCACAACTATGGCCATGGTCAGGCCGAGCTGATGGAGCGCAGTGAGCAGCAATCGAAGGAGCATGGTTCACATCATCCGCATCATGGCATGCCACCGACCATATCCCATTCGGCGGCTGCCCTCCTGGATCATGCATTCCTCCAGCAGGCCCTGGAGAATCGCGGCGGCGACATGGCCGGACGGGAGGCTCTGCATGCCATGGCTCTGGCTGCAGCAGCTCATGCAGCTGCCAATCGTATGTCCACCAGTCCACCCGGCTCCGGCTCAAATGGTCATCCACATGGCGCCCGGTCGCGCAGTCCCAGTCCAAGTCCGCGTCACTATGCCGAGGATCTGGAAATGCACGAGGCCAAGCACGAGCGGATGATCAAACGTGAACGCGAGCAGGACGAACGCGAAGATGCCGATGCCGATGATGAAGATGATCAGGAGCATGATCATGATCATGATCATGTGGAAGATTTATCCTTGGCCCGCAAAGAACGTCCCGAATCGCCGTATTCACCGCCACCGCCGAGGGCCTCATCGCCACTAGAGGGCGCCAGTGTCATAATGCATCACTCATCGAATTCCACCTCAACCTCAACCAATGGCAAAGAGCATGAGGATTCGCCGCCGCTGCCAGTGGGTTTGGGTCTCGGTTTGGGTCTCAAACGTGAGCTAATGGGCAGCGAGGAAACGCAAGCGCGCACAGACTGA
- Protein Sequence
- MGGGGGPTPTPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKTQEPEILRTAKELQVKGLYDNLMKFNNNKQTGGGASGASAGAAAEERIQSHYHASSVAPTSSSSHKPQNGDSYGHHQQHPHPHHPLPPSTHHNSSSSVISTSTHISPSAAISSSCSPPPPAFGGYQQTPYSNYGPSGANHSHIPAGETPLTPTHATPHGPGAGEAAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQSQQPNPLLLKSSSSSSLAEKTTPHQSGGGGGGGGGIGGGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAHNYGHGQAELMERSEQQSKEHGSHHPHHGMPPTISHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSTSPPGSGSNGHPHGARSRSPSPSPRHYAEDLEMHEAKHERMIKREREQDEREDADADDEDDQEHDHDHDHVEDLSLARKERPESPYSPPPPRASSPLEGASVIMHHSSNSTSTSTNGKEHEDSPPLPVGLGLGLGLKRELMGSEETQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501130;
- 90% Identity
- iTF_00604181;
- 80% Identity
- iTF_00604181;