Basic Information

Gene Symbol
Arid2
Assembly
GCA_018150745.1
Location
JAECWP010000001.1:16253574-16258754[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.1e-25 1.4e-21 76.6 0.0 3 89 71 156 69 156 0.93

Sequence Information

Coding Sequence
ATGTCGTCCATAGATAGTGTGCGTGTGTTATTGCAATCTTTGCCGGCGGCCAGTCAAGAGCAACTGCAGCCGGCGTCCAAGGGAATGGGAATTCTAGGGGCAACAACAACAACACCATTGCGCGCCAGAAATCAACTGCTGCAGCAGCAACAACAACAACAGCAGCAGCAATTGTCCCCTGAAAAAGTGGAAGGAAAGGCATCAGGTCCAGATGAGTTCTGGCGTGATCTTCATCAATTTCACGAGAGACGCGGAACACCCATTACCCAGACAGCAAAGATCAGTGGCCAGCATGTTGATTTGTATAAGCTTTACCAGGAGGTCACTGAACGAGGTGGCTTCAGCAAGGTCAATATGCGTGATGAATGGGATGAAGTGTACACGGCGATGGAGACGCTCAGAGAGCGCTGTGTCAATGGCACCGCCGGCATTAAACATATCTATCGACGCTATCTGGATAAATATGAGAAACTTAATTTCTTTGGCGAGGATCCGGACAAAATGGAAGCCTTAGAGGCGGCCATTGAGAGTGTAGAAATGAGTGGTGGTGGCGGCGGTGGACGTGCCCGCTCCAGAGCCATGACCAGTGGAGGAGTTGGCAGTATATTTGGATCTTCATATGGTTCCAGTTTACCGGCCGTGCCCATGTCCTATAATCAGCGGCAACATATAGTGAATGCCGACAGACGACGACAGTATAAAATGTCCACCCAACTGCATAGGCATAGCAATCATGAGAAGCTATTGTTGTCCCTACTCTCACCCCTGCCCAATGAGCAGGATTTTGCCATTAATGTCTGCACACTGATGGCCAATGAGAGCAGGTACCGCCTGGATTTGGTTGAGTGTCCCAAACTGCTGGACGTTCTATTGGCCCATTTGGGTGTTTATGCGGATTATACTATACGAAAATTGTTCCAGCATAGCTATGAGCAAGTGCGTCATCATTCGCAAAAGCAATTCTGGCGAGATTTGTTAAATGATAAGCCTCAAGTCCTAGATCTGTATACGGATGAGCAGGCTTGGGTGAACAATGGCCTGATTGACAAGGAGGAGGAGGAGGTGCAGAGCCAGAATCAAGATTTTGATGACTACTTTGATAATCTGGACTTTTTAAACTTGCGTCGCAGTCAGGGTACGGATGAGAGGATGGGCCAGAGAGTTCTACAGATTGTTCAACTAATGCGTAGCTTAAGTTTCCACCAGGAGAATCTTACCTTAATGGCTTCCAATCGAACACTTTGGCGGTATCTGGTGATGGGTTCCAATGTTCGTTGGAGCAACATTCATATACAGGCTCTGGAGACGGCAGGTAATCTTGCCCAGCTCTTTGAACTGCAGGATCCGAATACGGATGAGTTGTCACGCAATCTGTTGGCCACCCTCTGCGAGGGCATCGAATCCAATGATCGAGCCGTGATCATCTGTTGCCTGGAAATACTCTATAAGCTCTGCTCCCGTGAGGGAAACAGCCGACACATCACCAACTGCCTAGGCTTGGAGTTCTATCAGCGTGCCACGTTACTTCTGTCTCTCACAGATGTCATGCTCCTCATCTTTACCCTGGAGGCCATCTATGCCTTGAGCTCCTTGGGAGCACGTCCTTGTTCGCTGCTGATGCAGGTACGCGGTTTGGTTGATCAACTGGTAGCCTTGGTTACTGTGGAGGCGGGCACTTATGGTGTCGCTGGTTGCATATTGATGCGTGTCGTGGAGGTCGTTCCAGGCAATATGTTGCCGTCGGTGGCTCAAAATATGGTCGCATCTACAGTTGCTAATCCCAATGCGAGTGTCGTGGTCAATTCTCTGAAGACCGCAACTGTGGCAGCATTGCCGCCGCCTACTCCCGCCCAGACGCAAGTGTTGCAGCCGCAGGGTGAAGCTTTGCCAATGCCTATGCCCAGCCTGCCGCAGGTTCAGTTGCCAGTGCCCAGTTTGCCGCAAGTTCAATTACCCCCGGCGGTTCTGGCTGCAGTTGCTGCCGCACCTACACCTGCACCCATCTTGCCAGCTCCTCCATCCGCTCCCCAGAGTTTCACCCACGATGATGAGCAATACGCGTTGGCCTGGCTGGGTGCCACCTACGAGAGAGCGGGCTTGGGTAATGAATGTCGTGTGGATCAACAAGAGCTCTACCGGATCTATCTATCCCATTGCCAGAAGGCAGGAAAACTCTCGGTGGTTAATCATATTCAATTCCCACGCCTTGTAAGGCTCATATTTAACCAGACAGTGGGACCGGTAATAGTCCGTCAATTAGATGGCACGGAGCTGCCTGGAACCCATTATGTGGGCATCAGAATGAGAGCCCAGCCCTTAATTCTGCAGCAAAAGCAGCAGGTGACAACTGTGAAGAAGGATTTGCCGGTGCCATTGCCGGCCAAGCCGCAAATGGAAACCACATCAGTTGAATCCTCACAAGCTCCACCACCCTTATCCCAACAAGTCGAGGATACGCCCCCTCCGGCGCCGACACAACCCACTACATCCCTGATCAAAAGTCTATTGGCAAACAAGGTGACGGAACGTCAGCAGAAGCAAAAGAATCAAGCTCAGCCGCCGGCTTTGGTTCCCACCACAACATCCTCCTCCACTCAACCCATTAAGGTCACATCGACGGCTATTAGTGCCTTTGTTAACAATCCTCTGATGCAGCATACCCCGGTAAAGGTGGGTCAGACCACCATAAAGCCATTGAATCCTCAGATGGCTCTTGAGAAGAAAACCCACTCGGATTCAGCGCCTCCTCCATTGGCCCCCTTGAGTGGCTCTAATGTTCTGACCAAAGATCCCAGCAAGAGGACTCTGATTATAGCTAAACGTAAAATGACCATGGATGAGGAGCACGGCAAGCGTCTTGCTTTGGATGCTTCTGCCGCCAAGGAGCCAGAGACGCAAGTAACACCCTCCAAGAATGCAGCCAATCTCTATGCGGATTTGGCTGCCTCCATTCTAGAAGATGAGGAGATGGATGATGTTCCCCCCTTGGCCACGGCCAGTCAAGATCAGCAAATGCAGCAACAACAACAGCAGCAGCAGCAACAACAACAACAAATGCTCATACCAGCCAAAGTCCAGACTAGCGCTCCCACTCCAAGGCAACTCGTATTTCCTTCCAGCACTGTCGGAGGACCACCACCGCAGCTTAAGCTGGCCACCACAGCGACTATTAAAACGGATCAGGGTCTTCAAACAGTTCCAGTCATACTGCAACCGAAAACATTGGAATCCGCACCGGTTCCTCAGACGCAGTACGTCTTGGCCACCAATCAGCAGGGTCAGACCTATTTGGTAGCTCATCCCCAATCAACGACGGCTAACTCATCTCCCGCCACACCCACTTTGCTGGTGACTCAATCACCGCAGCAGCAGACCAAAACCATAATCATCCTGCAGCAGCCAGGGGGAGGAGTTGTGGCCAGTGCAAGCACAGCTAATGTAACTGGGACTCAAAAGATGATAATGACCACAGCGCAGGGACAGCAGGTTTTGGTCACCACCACAGCACCAGGTGGTGTTATGCAGCCACGTCCTCCGGGGCCACAGCAGCAGATTTTCATCACTCCCGCCCAGCGTCCGGTGGCCACTTTGGCTGGAGCTGGCCAAATTTCACCCTCGCTGCTGTCCCAGCTCAATCAGATTCCGGCCACCATTAAATTGCATCAACCGGCCACCATGAATCCTGGTAATCCTGTACAGCACCAGCGCCTTATAGCTGCCAAGCCATCGACAGCTGCTCTGCCCATTCCCCAACTGCAGCAGCATCAGTCCATTATCCAGCAACATATAATCTCGGGGCCAGCGCAGACTGGAGTGGGCGCTCCCGTCGAGAAGAGGCAAATCATTTTGGGTGGCATTAAGGAGACCACTTTGATCACCCAAACGCCGGCTACGACGGTTCCCCTCCAGCAGAGTCAGCTCAATTCTCAGACCATAATAACCACCCAACCACAGCAGGCGACGCCCCCGCCGGTGGTGGGTGTAGCCCTGCAGCAGCAACAACAACACATTCGGAGTGTACTCGAACAACAGCAGCAACATCATCCATCAATTATTCAGCAGAAGATTAGCATGCCTACGATGTCGGAAACGATCAAACCGAAGACTATTCTTCCACAGATCACGCAGGTGAAGAAGCCGCCAGTGCAAACGATAGTGCCTGCCCTGAAACCCACTCAAACCATCAGTGAAACGCCAACTACAATTGAGCAACCATTGGCGGTGCCTTCACCACAGGCCACACCGATCCCCACACCGGCTTCTACGCCCACTCCTCCGCCAGTACCCGTTGTGGTAGCTCCTCCTCCTGCATCTACGCCAGTGCCAGCTGTTCCTGTCGATGTCAACTGGCTATTCATCTGCGATTGGCGCAATTGCCCGAGGCGGAAATTCAAATCTCTAAACGACCTCCAGCATCATGTGTGCAATGTTCATTGTCCCGATCACTTGGATGCGGGAGCTGAAATCTATTGCCAATGGGGCAGTGGACCCGGCTTCTGTGACAATATAGCCAGGAAACGTTATTCCCTAATGACTCATCTGATTGATCGCCATTTGACAGCAGATGATCTGCGTGCCAGCATGCAACGTCGCTTGGCCACTGGCATACATAATGTGGCACCCGCCCAGCATCCGGTGACCATTGTACGGAATGTTAATGCCCCAGCGGCGACATCCACAGCGTCAGCAGGAGGAGGAGCCGCTGGAGCTACTGGGCCAGCCACAGGTCTGGGTACCACTGTGGGCACTTCAGCTTTGCAGGCCATCAAGCGATATACAGTTGATTTTGCCAATTCCAAAGAGCTTATGGACGAGAATGAGGGACCTGTCACGAAGAGCATACGCCTGACGGCAGCTCTTATCCTTAGGAATCTGGTTAGCAACACCTCGACAGCCAAGAGGAGTTTGAAACGCTATGAACCGCATTTGGCAAATGTGGCCTTGAGCAATGTGGAAGCCAGTGGTGTCCTATCTCACATACTGTATGAGCTTAGCCAGTAA
Protein Sequence
MSSIDSVRVLLQSLPAASQEQLQPASKGMGILGATTTTPLRARNQLLQQQQQQQQQQLSPEKVEGKASGPDEFWRDLHQFHERRGTPITQTAKISGQHVDLYKLYQEVTERGGFSKVNMRDEWDEVYTAMETLRERCVNGTAGIKHIYRRYLDKYEKLNFFGEDPDKMEALEAAIESVEMSGGGGGGRARSRAMTSGGVGSIFGSSYGSSLPAVPMSYNQRQHIVNADRRRQYKMSTQLHRHSNHEKLLLSLLSPLPNEQDFAINVCTLMANESRYRLDLVECPKLLDVLLAHLGVYADYTIRKLFQHSYEQVRHHSQKQFWRDLLNDKPQVLDLYTDEQAWVNNGLIDKEEEEVQSQNQDFDDYFDNLDFLNLRRSQGTDERMGQRVLQIVQLMRSLSFHQENLTLMASNRTLWRYLVMGSNVRWSNIHIQALETAGNLAQLFELQDPNTDELSRNLLATLCEGIESNDRAVIICCLEILYKLCSREGNSRHITNCLGLEFYQRATLLLSLTDVMLLIFTLEAIYALSSLGARPCSLLMQVRGLVDQLVALVTVEAGTYGVAGCILMRVVEVVPGNMLPSVAQNMVASTVANPNASVVVNSLKTATVAALPPPTPAQTQVLQPQGEALPMPMPSLPQVQLPVPSLPQVQLPPAVLAAVAAAPTPAPILPAPPSAPQSFTHDDEQYALAWLGATYERAGLGNECRVDQQELYRIYLSHCQKAGKLSVVNHIQFPRLVRLIFNQTVGPVIVRQLDGTELPGTHYVGIRMRAQPLILQQKQQVTTVKKDLPVPLPAKPQMETTSVESSQAPPPLSQQVEDTPPPAPTQPTTSLIKSLLANKVTERQQKQKNQAQPPALVPTTTSSSTQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLNPQMALEKKTHSDSAPPPLAPLSGSNVLTKDPSKRTLIIAKRKMTMDEEHGKRLALDASAAKEPETQVTPSKNAANLYADLAASILEDEEMDDVPPLATASQDQQMQQQQQQQQQQQQQMLIPAKVQTSAPTPRQLVFPSSTVGGPPPQLKLATTATIKTDQGLQTVPVILQPKTLESAPVPQTQYVLATNQQGQTYLVAHPQSTTANSSPATPTLLVTQSPQQQTKTIIILQQPGGGVVASASTANVTGTQKMIMTTAQGQQVLVTTTAPGGVMQPRPPGPQQQIFITPAQRPVATLAGAGQISPSLLSQLNQIPATIKLHQPATMNPGNPVQHQRLIAAKPSTAALPIPQLQQHQSIIQQHIISGPAQTGVGAPVEKRQIILGGIKETTLITQTPATTVPLQQSQLNSQTIITTQPQQATPPPVVGVALQQQQQHIRSVLEQQQQHHPSIIQQKISMPTMSETIKPKTILPQITQVKKPPVQTIVPALKPTQTISETPTTIEQPLAVPSPQATPIPTPASTPTPPPVPVVVAPPPASTPVPAVPVDVNWLFICDWRNCPRRKFKSLNDLQHHVCNVHCPDHLDAGAEIYCQWGSGPGFCDNIARKRYSLMTHLIDRHLTADDLRASMQRRLATGIHNVAPAQHPVTIVRNVNAPAATSTASAGGGAAGATGPATGLGTTVGTSALQAIKRYTVDFANSKELMDENEGPVTKSIRLTAALILRNLVSNTSTAKRSLKRYEPHLANVALSNVEASGVLSHILYELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2