Basic Information

Gene Symbol
Kdm5
Assembly
GCA_018150745.1
Location
JAECWP010000116.1:549528-555755[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.5e-26 1.5e-22 79.8 0.1 2 89 209 292 208 292 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAACTGAGGCGGACAATATAATTGGAGCCACATCTGGCGGTGGTGCTGGAGGAGGCGGAGTTGGAGCAGCTGGCTCAACGTCCTCAAATGGTACAGCAACGCCAGCACGTCGTCTAAGGACAAGAAATTCGACTGGAAGCGGCACAGCTAGTGGCAGTGAATCAGCTAAGAAATCATCATCATCAATAACCCATTCACAATCCAATTCCAATGATGATAGTCATCATCATCATCATGCACCATCATCTGCAGCCATAAATATCAGTGGATCATCTACTCAAACGGCAACTGCTGCGAGTGCTGCTGCTTTAGCGGCAACGGCAGCGGCCGCAACTTCGGGGGCAACATCTTCACTAGCTTTTGCACAAGGTGGAGCAGCAACAACTCCTGTTGCTCCTGCTACCGAACGTCCTATGCCCAGTGTGCCGATGAATCATGCCAGTAGCAGTGTCTCTGCCACTAGAAAATATCATAATAGTTGCCCACATCCACCGACACCGATGCATAAGAAAATCTTGCATACACAACCGCATAGCACAAATAAATTTGATCAGAATAAGAATGAGGAATTCCATTTTGATACACCACCCGAATGTCCTGCCAAGACGCGAGTTAAACTCAATTTCCTCGATCAGATAGCCAAATTCTGGGAGCTACAAGGAGCCTCACTCAAAATCCCAATGGTTGAGCGCAAGGCATTGGATTTGTATACACTACATCGGATTGTTCAGGAGGAGGGTGGCATGGAGACCGCAACCAAAGAACGTAAATGGGCCAAAGTGGCCAATCGTATGCAATATCCATCGAGCAAGAGTGTAGGAGCCACTTTAAAGGCACACTATGAACGGATACTACATCCCTTCGAGGTCTACACATCGGGCAAGGTGTTGGGTTCGAGTGGACCAACACCGACACCGGTTAAACTTGAGGATGGAGGCACCGATTACAAGTCTCATGAGATCCTAACACGTCAACAGATTGCTCCACCCAATGAACAGAATACACGACGCTCCAAAAGATTTGGTAATTCCACGGCAAGTTGTGGTCTAAAGGGCGCAACTGGAGCAACTGGTGGTGGTGTAACCATTAAAACAGAGACCAAGGAGGATTTCAAACGTGATTTGCTAAGCAGTTTTAATGCTGTCACAGGTTCTGGAGCAGCTGGTGCTGCTGGCAAAGATTCTAAGGATACCAGTGCGCCCACAACTCGCGGAGCCATGCAAAAGAAGTCAAATGAAATGCCAGCATCTGCATCAGTGGCAAATACCCCACTAATTGATCCACTCATGAAATACATCTGTCATATTTGCAATCGTGGTGATATTGAGGAAGCCATGCTCCTATGCGACGGCTGCGATGATAGCTATCATACATTCTGTCTGTTGCCGCCATTGTCCAGTATACCCAAGGGTGAATGGCTATGTCCACGATGTGTAGTCGAGGAGGTGAGCAAACCACAAGAAGCATTCGGTTTCGAGCAAGCCGAAAGGGAATACACTCTCCAACAATTTGGTCAGATGGCCGATCAATTTAAGCAGGAATATTTCCGCAAGCCAGTCCATCTGGTGCCCACCGAGATGGTGGAAAGGGAATTTTGGCGCATTGTCTCATCGATCGATGAGGATGTCACTGTCGAATATGGAGCCGATTTACATACCATGGATCATGGTTCCGGTTTCCCAACAAAGAGCTCAGTTTATCTGTTGCCCGGGGATCAGGAGTATGCCGAATCGAATTGGAATTTAAATAATCTCCCTTTGCTAGAGGATTCAATATTGGGGCATATAAATGCAGATATCAGTGGCATGAATGCACCATGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGTTGGCACAACGAGGATCATTGGAGTTATTCTATTAACTATTTGCATTGGGGTGAACCCAAAACCTGGTATGGTGTGCCCGGTTCGTGTGCCGAACAATTTGAGGAGACCATGAAACAGGCTGCCCCAGAATTGTTTAGTTCGCAGCCCGATTTACTGCATCAGCTGGTCACAATTATGAATCCGAATATCTTGATGAATAATCGCGTGCCCGTTTATCGTACGGATCAGCATGCTGGCGAATTTGTCATCACCTTTCCGCGGGCCTATCATGCTGGCTTCAATCAGGGCTATAATTTTGCCGAAGCTGTTAATTTTGCTCCAGCCGATTGGCTAAAGATGGGCCGGGAATGTGTCAATCATTATTCGATGCTGCGACGATTCTGTGTCTTTTCGCATGATGAACTTGTTTGTAAGATGGCTCTGGAGCCGGCTAAATTGACATTTGGTATAGCCACCGCTTGTTACATAGACATGGCCGAAATGGTCGATACGGAGAAGAAACTAAGGAAATCTCTGCTAGAATGGGGCGTCACACGGGCCGAACGTCGCGCCTTTGAACTGGTTAACGATGATGAGCGTCATTGTCAGGAGTGTAATACCACATGCTTTCTCTCCGCCGTGTCCTGTGAGTGCAATGAGAAGCTAATTGTCTGTCTGCGTCATTATACAGTGCTCTGCGGTTGTGCCCCAGAAAAGCATACGCTCATCTATCGTTATACCCTGGACGAGATGCCTCTGATGTTGCAGAAACTAAAGGTGAAGGCGCATAGTTTTGAACGTTGGCTATCGCGTTGTCGGGATATTGTCGATGCCAATACACCGACTTCGGTTACCCTATCCGAATTGCAAGAGCTGTGCAAGGAAGCGGAGACGAAGAAATTTCCCTCATCCCTGCTCATAGATCGTTTAAATGCGGCTGCAATTGAGGCAGAGAAATGCGTGACAGTCATCCAGCAACTTGGCATAAATAAGGTTCGCACTCGTTCGGATCACAATCAGGAGGCAGCTCAATATAAACTAACTATGGAAGAGCTGGAACTATTTGTCCAAGAGATTGATAATCTTTGCTGCATCATCGATGAAGGCACCTCAGTTCGTGAACTTTTGGTGTTGGGCAAACAATTTGTGGAGCGAGCCGAGAGCCAATTATCTCTGTCACTAGAGGCACTCGAAGAGAACGAGCTGGAGACTCTAATTAGTGAGGGAAGTTCACTTCGCATAGAGTTGCAACAGTTGGATTTACTACAGAAGCGGATTAAGCAATGCAAATGGTATAAACGCTCGCAGGGATTACGAGAAACTAGTTCCAAGTTGACCTATCAGGATATCAAGAATCTTTTACATATGGCAGCAGCCGACTTGGATCCCACAGATCCGTATGTCGACAAGGAGATGCGTAAACTGCAGAAAATTGGAGCTGATATCGAGGCTTGGGAATCGCAGGCAGCGAAATATTTCCGACGCTTGACCCAACAACATGAACTGCCGGATATTGAACAGTTCCTAAAGTCGGCTAGCGAAATTAACGGTCAAGTGCCATCGCATGGAATATTGAAGGACGCCCTGCGCAAGGCACGCGAATGGCTACGTTCGGTGGAGCAGTTGCAGCAGAATAATCATGTGACCTACTGTCACACGCTAGAGACTATGATTGAGCGCGGTCTGGGCATACCGATCCAATTGGAGGAGCTAAGTCGAATGCAAGGCCACCTGAATAGCGCCCATCAATGGAAAGATAATACAGCCTGCGCCTTTCTCAAGAAGGGGACGTGTTATACGCTCCTCGAGGTGCTAATGCCTCGTGCAGATGCCATTAACATTGACTCGGATCTCAAGCCACGCTTCCAGGATGATTTTCTGAAGGAGAAGAATCCCGCTGAAATTGTGGCCACCTTTAAAAATGCCGAGGAACAAGAGCTAGTGGATATGCGTGATTTACGACGGCAAAATGTGGCCAAGAATCCACGAAGAGATGTCTTTTGTCTCTGCAAATCGGAATTCCGCTCGTTGATGTTTAATTGTCAATTGTGTCGGGATTGGTTCCACGAGGATTGTGTTCCTCCACCGCCATCGGTGGCATCGTCAAATGGTCTACTAAATGGTGGCGGAGCTAGCAGCAGACCGCGTCTGGAAACCATACTCCCACTACTTGTCCAACTCCAACAGCTGCCCATTCGTCTGCCTGAGGATGAGGCATTGCGTTGCCTGGCCGAGCGTGCAATGAACTGGCAGGATCGAGCCCGCAAGGCACTAAGTAGTCCGGATGTGAGTGCTGCTCAAGAGGCCATTGTGGCGCAGCAACAGCAGCTGAAGAGGCGCTCTGACGGGGGATTGGGCAGCATTAGTAGTCCTCGCAAGCCACGTCGTCGGGGCAGTCTGTCTAAGGAGGCCAGCGGTTCCACCGAATCCGATGCCGATGATGATGATGACGAGGATGAATGCCGTCTGCGAATTGTCGAAGATGGCTTCAGTAATGACGAGGATGAATTAAATTCTGCTAGCGCCACACCCCACCCCGCCACATCCGCCACGACCAACATCAACAACGCCGACTCCAATTCCGATCTCCTTAAGCTGCTGTCCGATAGTGAAATTGAAAATCTTCTTGACCTCATGATGGAGGGTGATCTGCTGGAGGTCTCTTTGGATGAGACCCAGGAACTCTGGCGTATTCTAGAGACTATACCGCCCACTCAACTGCAGGCTGAGGCCTTGAGTCGGGTGGCCCAACATGTCCAACGGCAGCGGCAACAGCAAACACATCCGATTTTACCAACATCCTCCAGCATACACTCCGGTCCCGAAGACTCCAATGACAGTCTGTTGGTTCAGAACAGTCCCAATAGCCAAAGTGGTGCAACAGGAGCCGGCGGAGCAGGAGGTGGACGCAATAAGAAACGACGATCGAATGATGCCAGTGGCGCCAATGCGGCGGTTCCGCGCAAGAAGCAAAATACACCCAAACAGACGCCCAACAAAAAAGGTGCGGCAACTGCAGCAGGACGGAAAAGTGAGACGAAGGCGGCGACGACGACGACAACTGGTGCGGATGCCGATGCGGAAAACAAGCAGGCAAATGGTGGCAATACAACTGGCACAGCGGGAACAACACCGACCACCACACCCACTCCAGGCTCGGCACACAAGAAACGCAAACGAACCTCCACCAATAATAATAACAACAACAACAATCCAAATAATAACTCCAACAATAGTAATTCTGGTGGTGCTGGAGGAGGAGGAGGGGGAGCTGCAGCTGCAACACCACCAACAACTGGTCAAAAGAAGCATGCCCAGCGCAACCAGCAGGCGGCCCAAGAAGATGACGAGGAGGAATGCCGGGCGGAGAATTGCCATAAGCCAACGGGACGTGAAGTCGACTGGGTGCAATGCGATGGCGGATGCAATGAATGGTTCCACATGTACTGTGTGGGTCTCAATCGTAGTCAGATCAAAGCGGATGATGATTACATATGTATACGTTGCACCAAAACTGTCACAGTGGTGGCCACCACAACGACGACGACAACGACAGCAGGAGCAGCGGCAGCGGCGACAAGCACTACGACTCCAAGCAAAGGTCAACGGACTGCACAGTCGGCGAGGTAG
Protein Sequence
MSAKTEADNIIGATSGGGAGGGGVGAAGSTSSNGTATPARRLRTRNSTGSGTASGSESAKKSSSSITHSQSNSNDDSHHHHHAPSSAAINISGSSTQTATAASAAALAATAAAATSGATSSLAFAQGGAATTPVAPATERPMPSVPMNHASSSVSATRKYHNSCPHPPTPMHKKILHTQPHSTNKFDQNKNEEFHFDTPPECPAKTRVKLNFLDQIAKFWELQGASLKIPMVERKALDLYTLHRIVQEEGGMETATKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGSSGPTPTPVKLEDGGTDYKSHEILTRQQIAPPNEQNTRRSKRFGNSTASCGLKGATGATGGGVTIKTETKEDFKRDLLSSFNAVTGSGAAGAAGKDSKDTSAPTTRGAMQKKSNEMPASASVANTPLIDPLMKYICHICNRGDIEEAMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSVYLLPGDQEYAESNWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVSCECNEKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDANTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGTSVRELLVLGKQFVERAESQLSLSLEALEENELETLISEGSSLRIELQQLDLLQKRIKQCKWYKRSQGLRETSSKLTYQDIKNLLHMAAADLDPTDPYVDKEMRKLQKIGADIEAWESQAAKYFRRLTQQHELPDIEQFLKSASEINGQVPSHGILKDALRKAREWLRSVEQLQQNNHVTYCHTLETMIERGLGIPIQLEELSRMQGHLNSAHQWKDNTACAFLKKGTCYTLLEVLMPRADAINIDSDLKPRFQDDFLKEKNPAEIVATFKNAEEQELVDMRDLRRQNVAKNPRRDVFCLCKSEFRSLMFNCQLCRDWFHEDCVPPPPSVASSNGLLNGGGASSRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAQEAIVAQQQQLKRRSDGGLGSISSPRKPRRRGSLSKEASGSTESDADDDDDEDECRLRIVEDGFSNDEDELNSASATPHPATSATTNINNADSNSDLLKLLSDSEIENLLDLMMEGDLLEVSLDETQELWRILETIPPTQLQAEALSRVAQHVQRQRQQQTHPILPTSSSIHSGPEDSNDSLLVQNSPNSQSGATGAGGAGGGRNKKRRSNDASGANAAVPRKKQNTPKQTPNKKGAATAAGRKSETKAATTTTTGADADAENKQANGGNTTGTAGTTPTTTPTPGSAHKKRKRTSTNNNNNNNNPNNNSNNSNSGGAGGGGGGAAAATPPTTGQKKHAQRNQQAAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCTKTVTVVATTTTTTTTAGAAAAATSTTTPSKGQRTAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2