Dsup000867.1
Basic Information
- Insect
- Drosophila subpulchrella
- Gene Symbol
- grn
- Assembly
- GCA_014743375.2
- Location
- NW:10982489-11019599[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-19 5.2e-16 57.7 4.7 1 35 486 519 486 520 0.98 2 2 7.5e-19 1.8e-15 55.9 6.3 1 35 546 579 546 580 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTACGACAGTCCGCGCTTAGGGGGCGGCTCCTCGGGCGGCGGCAATGGGGGCGGGGTCTCGCCCCAGACGAACGGCCTTGGCAGCGCCGGGAGCAGCCTGGCCCACAGCCACCACAGCCTCTCCAGCGGCGCCAGCTCGGCGGGCAGCAGCGTGGGCGTGGGCGCGGCCCtgggcggcggcggtggaTCCGGACTGGACACCAGCGACATGAGCGCCTTCTACGCGCTGGAGAGCAACGGACACCACCGGCGCTACTACCCGAGTTACCACCAGCACACATCCCGCATGCCCTCCACCCATGCCTCGCCCCAAGTGTGCCGGCCCCACTTCCACACCCCGCTGAGTCCCTGGCTGACCAGCGAGCACAAGTCCTTCGCCCCCGCCAGCGCCTGGAGCATGGGCCAGTTCGCCTGCCCCCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAGATGGGCCAGAGCCACCAGACGACGGCCGCCGGACAGCACTCGTTCCCCttcccgccgacgccgccaaaGGACTCCACGCCCGACTCCGTGCAAACCGGTCCATCCGAGTACCAGGCCGTGATGAACGCGTTTATGCACCAACAGGCCACGGGCTCTACCTCACTGACGGACGCCAGCTGTGCGCTGGACATCAAGCCGTCGATCCAGAACGGGAGTGCGAGCGGATCCTCCGGCAGCGGCACCACCCACACGTCGACGCCCAAGCAGCGCGAAGGTACCACCAGCACCactaattccagctccaactccaccagcagcagtcagcagcagcagcagcagcagcaacagcagcagcagcaacagcagcagcagcaacagcagcagcaacagagcagcagcaacagcaacaccaccgccagcagcaacacatCTGCCTCGTCATCCGCCGCAGCAGCTTCCCTGTCCGCCGCCGCAGCCGCCGCCTCCGCAGCCACATCCTCGAACGGATTGTTCGACGGAACGGCGCAGGCGTACAGCAGTGGCGGTGGGAGTGGGGGTGGCGGTGGTGGCGGTGGCTCAGGTGGCTACGACACCAGCAGCTATGCCTCCTACCACCATGCGGCGGCGCATCATCAGGCCGCGGCGGTGGCGGCGGCGAATATGTTCCAAAGTTCCTCGGTGGCAGCGGCTGCAGTGCGTCACAGTATGGCCGCTGCGCAGgcgcaccaccaccaccatcaccACCACAGTGGCCACCACCATGGTGGCTCGTCCTCCTCGGGAATGCATGGCCTGGGCGGCTCGGTGGTGGGCGGCACCGCCGGCATGGGCAGCATGAGCGGCAACAGCGGCGGAGCGGGATCGCTGAGCGGTCACAGTGGCGGCGGCAGCAATGCGGGCAGCGGCGGTCTGGATGTGAAGCCCGTGCGGACCAAGCCGCGGACAAGTGCCGAGGGACGCGAGTGTGTGAATTGTGGCGCCACATCGACGCCACTGTGGCGACGCGATGGAACGGGACACTATCTGTGCAACGCCTGTGGCCTGTACTACAAAATGAACGGCCAGAACCGACCCCTGATCAAGCCAAAGCGAAGACTGACCCTGCAATCGCTGCAAAGTGCGGCCAAAAGGGCGGGCACATCCTGCGCCAACTGCAAGACCACGACCACAACCCTTTGGCGACGCAATGCCAGCGGCGAACCCGTGTGCAACGCCTGCGGATTGTACTACAAGCTGCACAATGTCAATCGTCCGCTAACAATGAAAAAGGAGGGCATTCAGACGCGTAATCGCAAGCTGAGCTCCAAGTCCAAGAAGAAGAAGGGTCTTGGCGGTGGCTGTCTGCCAATGGGAGGACATTTGGGCATGGGCGACTTCAAGCCGCTGGATCCCTCGAAAGGATTCGGCGGCGGTTTCTCGGCCTCCATGGCACAACATGGACACCTCTCGAGCGGACTGCATCCGGCACATGCGCACATGCATGGCAGTTGGTACACCGGCGGCATGGGCGCCCTGGGAGCCTCGAGCGGTCTGCAGGGCGGCTTCTCCACCGCGGGCTCTCTCGGCGGAGCGGTGGTGCCCCACTCGCAGCCCTACCACTTGGGCCTCAGTTCGATGGGCACCTGGCGCACTGACTACACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGSSGGGNGGGVSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSVGVGAALGGGGGSGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVEHKLGQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGSASGSSGSGTTHTSTPKQREGTTSTTNSSSNSTSSSQQQQQQQQQQQQQQQQQQQQQQQSSSNSNTTASSNTSASSSAAAASLSAAAAAASAATSSNGLFDGTAQAYSSGGGSGGGGGGGGSGGYDTSSYASYHHAAAHHQAAAVAAANMFQSSSVAAAAVRHSMAAAQAHHHHHHHHSGHHHGGSSSSGMHGLGGSVVGGTAGMGSMSGNSGGAGSLSGHSGGGSNAGSGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGAVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00505769;
- 90% Identity
- iTF_00537163;
- 80% Identity
- -