Basic Information

Insect: Drosophila subpulchrella
Gene Symbol: Paris
Assembly: GCA_014743375.2
Location: NC:10768085-10769933[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.1e-05 0.0012 18.9 0.3 1 23 180 202 180 202 0.98

2 9 0.0016 0.094 12.9 3.8 1 23 286 308 286 308 0.96

3 9 8e-07 4.6e-05 23.4 0.4 1 23 312 334 312 334 0.98

4 9 9.5e-05 0.0055 16.8 3.1 1 23 353 375 353 375 0.98

5 9 5.1e-05 0.0029 17.7 0.2 1 23 381 403 381 403 0.97

6 9 0.0002 0.012 15.8 9.3 1 23 409 431 409 431 0.99

7 9 8.3e-07 4.8e-05 23.3 1.9 2 23 438 459 437 459 0.97

8 9 9.2e-06 0.00053 20.0 6.8 1 23 465 487 465 487 0.98

9 9 0.082 4.7 7.6 3.3 1 21 493 513 493 514 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.1e-05	0.0012	18.9	0.3	1	23	180	202	180	202	0.98
2	9	0.0016	0.094	12.9	3.8	1	23	286	308	286	308	0.96
3	9	8e-07	4.6e-05	23.4	0.4	1	23	312	334	312	334	0.98
4	9	9.5e-05	0.0055	16.8	3.1	1	23	353	375	353	375	0.98
5	9	5.1e-05	0.0029	17.7	0.2	1	23	381	403	381	403	0.97
6	9	0.0002	0.012	15.8	9.3	1	23	409	431	409	431	0.99
7	9	8.3e-07	4.8e-05	23.3	1.9	2	23	438	459	437	459	0.97
8	9	9.2e-06	0.00053	20.0	6.8	1	23	465	487	465	487	0.98
9	9	0.082	4.7	7.6	3.3	1	21	493	513	493	514	0.95

Sequence Information

Coding Sequence: ATGGATGAGGAGGAAGTATGCCGGGTTTGCCTGCAACAGGATGGCGATATGATCAATATATTTGACGGTGTGCAGGACCAGGAAATGTCCATTCCAGATATGATTGCCCAGTGGTCCGGCTACCAGGTTGAGAAAGGCGATTCACTTCCGGAAAGTATATGTCCAACCTGCTTGGAGGATGCCCGAGCCACATTTGGAATAATCCGAAAACTGCAGAAGGAGGAAGTCTGTCGAATTTCAGACAGTGAGGATTCCATTTGCGACAAAGAAACggaaaaaccttttaaaaatgtacataGTGAGGAATCGAATAGCGCCCAGGAATACAAGGTTAAAAACGAGCCTATCGATGAGGACATATTTCTGGAGGCAGCATGCAAGGCAATGGAAAGCGACCTATTCGAGGAAGATGTCTGCAAGATTGAAGTCGTTGAAACGGAACAATATATTGGCCAGAAGTATATATTATCTGCATTAGATCTGGATCTGGGTAATATACCCAAAACATCGGACTTGCCTTCTCGAGGGAAACGGCGTTACAAGTGTTCCCTGTGTCCCAAGTCTTTTGCGGATGCCTTACAGTTTAGCCAACACATTGTAACCCATTCAGAAGAAGACGCCGATGGTCAAAAGTCTGATTTTTCTGATTCAGATTTTAGCACCACTGGGTTCGAAGAGGGCGATTATTATCCGGATTCTGAAACAGAGGTACCATCTGAAAAGCCTCAAATAAAACAACGCCAAAAGACTTCTGCATCCACCACCccattaaagaaaaaaatcctAACCCATTTGCATGATAAAACGAAAACGGATTTGCCTGCATCGGAACGTATACCCACACCTTACTTGCCCTTCAAATGTAATTATTGCCCGAAAACGTTTCAGGACAAAGATTCCTGTACACTGCACGCACAATCGCATGGCAAGCAATTCCGATGTTCCGATTGCCCGAAGACTTTTGCGGAGGCAAAGCAGTTGAAGCAACACATTTTGAGCCATTCAGAGGATCAGACCGATAAACCGAAGCCTTCACCATCAGGTCTTCCTCGAGTGTTCAAGTGCCCCAAGTGTCCCAAGTCGTTTCCGTATTCCTCAAGTTGCAGTCGACATCTGCTAAGTCACTCGGAGATACGACCGTTTAAGTGTCCCCAGTGTCCAAACTCCTATGCACGTCCCTATGCCCTCAGAGCCCACTTTACTATGCACTCCGGAGAACGATCGTTCAAGTGTGATCAGTGTTCCAAGACCTATAAGAAGGCACACCATCTCAAGCACCACCTGTTGACTCATTCTAATGAAAGGCCGAACAAGTGTTCCCAATGCAACAAGACCTTCATGTCCAGGTCCGATCTAAATCGACACATCCGGGCGCACTCTGCAGTAAAGCCCCACAAATGTGATGACTGCTCAAAGTCTTTTCATCGACCTTGCGATCTGAAAGTTCATATCCGTACCCACACTGGCGAAAGACCCTTTAAGTGTGCCTGCTGTTCGAAGTCTTTTACGGCTAGAAACAATATGCTGAAGCACCAAAGGCAATGCAAACTTTAA
Protein Sequence: MDEEEVCRVCLQQDGDMINIFDGVQDQEMSIPDMIAQWSGYQVEKGDSLPESICPTCLEDARATFGIIRKLQKEEVCRISDSEDSICDKETEKPFKNVHSEESNSAQEYKVKNEPIDEDIFLEAACKAMESDLFEEDVCKIEVVETEQYIGQKYILSALDLDLGNIPKTSDLPSRGKRRYKCSLCPKSFADALQFSQHIVTHSEEDADGQKSDFSDSDFSTTGFEEGDYYPDSETEVPSEKPQIKQRQKTSASTTPLKKKILTHLHDKTKTDLPASERIPTPYLPFKCNYCPKTFQDKDSCTLHAQSHGKQFRCSDCPKTFAEAKQLKQHILSHSEDQTDKPKPSPSGLPRVFKCPKCPKSFPYSSSCSRHLLSHSEIRPFKCPQCPNSYARPYALRAHFTMHSGERSFKCDQCSKTYKKAHHLKHHLLTHSNERPNKCSQCNKTFMSRSDLNRHIRAHSAVKPHKCDDCSKSFHRPCDLKVHIRTHTGERPFKCACCSKSFTARNNMLKHQRQCKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00604998;
90% Identity: -
80% Identity: -