Basic Information

Gene Symbol
onecut
Assembly
GCA_014743375.2
Location
NC:1006463-1014998[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-38 2.7e-34 116.7 0.3 2 78 776 852 775 853 0.97

Sequence Information

Coding Sequence
ATGGAGTCCATAAGTGAAATAATTGACCACCAGACCTTTAGCCAGGACCTGGTTGAAGATGCAACAGATTTCATCACCGTGGGACACCACTCGGAGCGTCAGTCCCAGTCGCACCACCAACACCAGGAGGGAGGACCCGATTCCGGCGGGGACTTGGCGATTTCGCTGCAAACTATGACTGCCTGCCCAAGAACGGACGGATCTAGTGGAGGGAAGAAACACCGGTCTGGCCCTGGCTCTCGATCCGGATCCGGATTGGTTTCGGGGTCGGGCTCTGATTCCGTTGTCATGGTGATCGACTCAATGGGCCACAGCAATAGGCAGACGTCCTTTCAAATTGTGTCTCAGCAGCTGCAGCCCAGAACAATGGCACTGCCCTTCGGGCTGCTCCAGCCGGACAGGCACAACACGCAGCAATGCCCGGAGCGAATGGTGAGTAGCAGCCCAGTGGACTTTGTGGCGTCCGACATCAGCTTGGACGGTCTGACAGTggactcgatgtcccagtcgGTTCTCTCCCAAGAGATGGCGATAAAGCAGGAACAGAAGCTACTTATTGCCCAATCGAAGTGCCTGGATCAAGGCCACAAGCGCATTCGAATGCACGTAGACGTGGCGAGTGTGAATGCAGGTCTTGGCGTGGACGTCGACGAAATGGATGACATTTCCTCCGACGACGTTGGCTGCGACGACGAGGGGATAACGCTGAAtcagcaccaccagcagctcctggaacagcagcagcagtacgGCCTAACGAGCCACCATCCGCACCACCAAGCTCAAGCTCAGGCGCTCCACGGCCTACACCACAGATCAGCTCAGCTGGAAATGGGATTGGAGGCGGTGCACGGCGAGGTTCTGTCAGTCATCGTCCACTCGCAGGACAGCGACAAGGAGGTGGACGGCGAAGGAGACGCCGATGGGGAGGGAGACGGAGATCCGGAGGATGAAGACGACGACGATCGGGACTCGCGCAGTCGAGGGCAGCTGCTCAGCCACAGCTCGTACCAGACGCTGACCTCGGTGAATGATCGACTATCACCGCCTGGGTTCAGTCAGACATCATACGCCACCCTGACCCCTATTCAACCACTTCCGCCTATATCGACAATGTCCGAAAAGTTCGCGTACTCCGGCCACATCTCCGGAGGAGATAGCGGCGACGCGGATGTCAATGGTGGAGAAGGAGGTGGAGGAGTGGTCGAGGGTGGAGAGGTCACCAACCAATCCGCCGAGGCTGCTGGGACGGGCTCGATCTCTAGTGGCAATGTGGCGTCCTCCGGATGCAACAACAACGATTGCAGCTCATTCTCTGCCCTTACCATGCCCATGGGAAGTGGGCACTTGGGCTTGGGCGTGTTGAGCGGCGTCCAATCACCATATTCCTCATATGAAAAGCTATCGTCGATGATTTCACCTCCACCCAATAACTACTTGGTCTCGTGCGATCTGCATGCCTCGGTTTCGGGACGAGTGTCTAACTCATCTCAACTGCAGCTAAACCACAACGGGCACAAAAAAGAATCAGCAATAGCTCACGGGCACCCCCATGGTCATGCCGATGTCAATGGGGGAAAGTTTGCCTACTCTGGCCACATATCTGGAGGAGAAAGTGCAGATACCGATGTCAACGGCGAGAAGTTTTCGTACTCTGATCACATCTCAGGAGGGGACAGCGGAGACGCAGATGTCAATGGAGAGAAATTCGTTTACTCCGATCACATCTCTGGAGCAGATAGCGGTCCCGGTGTCAACGGAGGAACGAATTGGCTTCAAATGCACCCTGAGCGGGAGGTGCGACTTCATATGCCGGTTGACCTGGAGACTCGGTTCCACATTCCGCTAGAGCGGAGATCTCGACTTAACATGCCGCCTGAGCGGGGACACTTGAACCGGCAGCTTCCTACGGCCACTCCGATCTGCCCTCCGGACTGGAAGTCAGATGACTGGAAGCACGGCAACGGTAGCATTGTTAGTCTGTCCGCCGATCTGCCAGTGGTCGTGTCTCTCACTCCAACCCCCCCTCCCGTAACAGACGATTCAGCCGGACTCAAGCTGAATGAGCGACTGTCCCCAGGGCAGAGACCCCAGTTTTTCCTGGACAAAGACCAAGAGACGAGCACCGTGACAGCAGAACAGTGTAGTCCGAACATCCACGGTACCCAGCACTCAGGGTGTGTCATCCACCAGCAGCCCCAATCAGCTCTGCTAAACGGCTTTCAAGGTGCCAGCCAGCAGGCCAAGATTTCGGTCTCTGCCTCGCCAAAAGCGTCAGTGACCTCTGGGGGAGGTGGATCGAGCCGCAATGGAAACACCAGTGACATGGAGGAGATCAACACGAAGGATCTGGCTCAGCGCATCTCGGCCGAACTCAAGCGGTACAGCATACCACAGGCGATCTTCGCACAACGTGTTCTCTGTCGTTCGCAAGGTACTTTGTCCGATCTACTGCGCAATCCAAAGCCGTGGTCCAAGCTTAAGTCCGGCCGGGAGACATTCCGAAGGATGTACAAGTGGCTCCAGGAGCCCGAGTTTCAGCGCATGTCTGCTCTTCGAATGGCCGCTGCCCAGATTCCCCAGCGAGCGGTTTTGGGGTCTGGGATGACACTTGGACCAGCAACGGGATCCACATCCACCATACCGACCGATTTGGACTCTCATGTTGGGCCAACAATGACACCAAATGCTCCGCCCAATGAATCGGTTTCTTCGTCTGCATCTACACCCGTCACGATCGTGTCCGCTACCAACATCGTTAGTTGTCGTCGAAAGGAAGAGCCTCAGATCGAGCAAATGCCTCAGCCAAAGAAACCGCGACTGGTCTTCACCGATCTTCAAAGACGAACATTACAAGCGATTTTCAAAgaGACCAAAAGACCTTCGAAGGAGATGCAAGTAACGATCGCGCGGCAACTGGGACTAGAGCCAACAACAGTGGGTAATTTCTTTATGAACGCCCGCAGAAGATCGATGGACAAGTGGCGGGACGATGACTCTAAAAACAGCATGCACTTATCGCATAGCCGCCAACAACAACAGGACGAGCAGGAAGAGGACGAGAGCCACAGTCAAAGTCAGGGTCAAAATCAGGGCCACAATCACAATCATAACCCGGCTAGCCTAACGCAGGAAAACTACTCCAGTCTCCATACAACAGCCATGTCTCCTCTTGGAGCCTTCGACGAAGAAGCTGATATGGACTTAGAGTTGGAAAGTCACGACTTCGATTTGGTGGACCCAGATGACCATGGAGATACCAATGATCCCAACGGGGACATGTTGTGA
Protein Sequence
MESISEIIDHQTFSQDLVEDATDFITVGHHSERQSQSHHQHQEGGPDSGGDLAISLQTMTACPRTDGSSGGKKHRSGPGSRSGSGLVSGSGSDSVVMVIDSMGHSNRQTSFQIVSQQLQPRTMALPFGLLQPDRHNTQQCPERMVSSSPVDFVASDISLDGLTVDSMSQSVLSQEMAIKQEQKLLIAQSKCLDQGHKRIRMHVDVASVNAGLGVDVDEMDDISSDDVGCDDEGITLNQHHQQLLEQQQQYGLTSHHPHHQAQAQALHGLHHRSAQLEMGLEAVHGEVLSVIVHSQDSDKEVDGEGDADGEGDGDPEDEDDDDRDSRSRGQLLSHSSYQTLTSVNDRLSPPGFSQTSYATLTPIQPLPPISTMSEKFAYSGHISGGDSGDADVNGGEGGGGVVEGGEVTNQSAEAAGTGSISSGNVASSGCNNNDCSSFSALTMPMGSGHLGLGVLSGVQSPYSSYEKLSSMISPPPNNYLVSCDLHASVSGRVSNSSQLQLNHNGHKKESAIAHGHPHGHADVNGGKFAYSGHISGGESADTDVNGEKFSYSDHISGGDSGDADVNGEKFVYSDHISGADSGPGVNGGTNWLQMHPEREVRLHMPVDLETRFHIPLERRSRLNMPPERGHLNRQLPTATPICPPDWKSDDWKHGNGSIVSLSADLPVVVSLTPTPPPVTDDSAGLKLNERLSPGQRPQFFLDKDQETSTVTAEQCSPNIHGTQHSGCVIHQQPQSALLNGFQGASQQAKISVSASPKASVTSGGGGSSRNGNTSDMEEINTKDLAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMYKWLQEPEFQRMSALRMAAAQIPQRAVLGSGMTLGPATGSTSTIPTDLDSHVGPTMTPNAPPNESVSSSASTPVTIVSATNIVSCRRKEEPQIEQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDSKNSMHLSHSRQQQQDEQEEDESHSQSQGQNQGHNHNHNPASLTQENYSSLHTTAMSPLGAFDEEADMDLELESHDFDLVDPDDHGDTNDPNGDML