Basic Information

Insect: Drosophila suboccidentalis
Gene Symbol: pita
Assembly: GCA_037043435.1
Location: JBAMBK010001487.1:130683-132883[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.013 0.91 10.4 0.2 1 23 259 281 259 281 0.91

2 9 3.1e-05 0.0023 18.6 2.5 1 23 287 309 287 309 0.94

3 9 0.00017 0.012 16.3 1.9 1 23 315 337 315 337 0.99

4 9 0.00053 0.039 14.7 0.2 1 23 343 365 343 365 0.96

5 9 9.2e-05 0.0067 17.1 0.3 1 23 371 393 371 393 0.95

6 9 1.3e-05 0.00091 19.8 0.2 1 23 399 421 399 421 0.97

7 9 0.0017 0.12 13.1 5.8 1 23 427 449 427 449 0.98

8 9 0.00012 0.0088 16.7 0.0 1 23 484 506 484 506 0.98

9 9 0.0055 0.4 11.5 0.8 1 23 512 535 512 535 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.013	0.91	10.4	0.2	1	23	259	281	259	281	0.91
2	9	3.1e-05	0.0023	18.6	2.5	1	23	287	309	287	309	0.94
3	9	0.00017	0.012	16.3	1.9	1	23	315	337	315	337	0.99
4	9	0.00053	0.039	14.7	0.2	1	23	343	365	343	365	0.96
5	9	9.2e-05	0.0067	17.1	0.3	1	23	371	393	371	393	0.95
6	9	1.3e-05	0.00091	19.8	0.2	1	23	399	421	399	421	0.97
7	9	0.0017	0.12	13.1	5.8	1	23	427	449	427	449	0.98
8	9	0.00012	0.0088	16.7	0.0	1	23	484	506	484	506	0.98
9	9	0.0055	0.4	11.5	0.8	1	23	512	535	512	535	0.91

Sequence Information

Coding Sequence: ATGAATGCATGCAGCGTTGCCACCTCTTGCACTGCAACCAGTGCGCATGTGGCCAGCGATGATGGAATGCCCAGCTATATTTGTTTGGACTGTCGTCTGCTCTTCGAGCACTGCTATCGCTTCAAGCAGATGTGCAAAAATGCCGAGACACTCCTACGTCAGTATCCACTCACTGGCAAATGGCCAGAGCCTCTGGAGAAACCGCGAGCACCGTTGGTTTCCAATCAAGCGAATCAAGCGAAGAAACCGATGCAGACTGAAGTGCAGCCCAAGAAGCTGCTCAATTCGATGGCCAAATCCAACAATGTGACCATTGAGAGTGTGCAGGTGCTGGAGACGAGTGCTCTGACCAAGAAGCTGCTCAATGTGGCCGCAACCAACACAGCGGAGCCACCTGTGCCTGTGAAGCTCGTGGCTGCGAAGCGTCCGCACTCGCAGTCCTATCAGGTGAAGCTGGAGAATAGCGAGGAACTCTCGATGGATGATGTGCACAATTTGATAGCTGACATGGGATTGGAGGAGGAATTTGAAAATCCAACGCCGACATCGCCGGTAAAAAGTGTTTCTGCCAGCAAACCAAAGGTTCTGAACAAATCCTCGATGCGCATACTGAACAAGGGCAGCAGTGCGACGGTGGAGCCACGCCTTGCTACGCCCCAGTTGAAGCACTATGAGGATGGAAATGTTGCGCTTGTTACAGAAATTCTTGACCCGAATGAGATCGATGCGGCTGCAGATCCCGTAAAGAATGCAGAGCCCGTGGCAACCAATGTGTTTCCATGTCCACATTGCGAACGATCCTTTCCGCTGATGCAGCTGCTCGACATCCATCTGGTCAACCATACACGTGAGCGCAGCTTCCAATGCGCCGAGTGCAACAAGAGCTTCTTCTCCAAATACGATCTGCAGAAGCACAACTTTATCCACACCGGAGAGCGTCCGTACAAATGCAGCGTATGCGCATCCTCCTTCACACGGCGCGCCTTGTTGCATCGCCACGAACGCATCCATACCGATGTGCCCAAGTTCATTTGCCTGTACTGCGAGAAGCCGTTCATCTCGCGCGAGGAGATGGAGAAGCATGCGGAGCGTCATACCAAGAATCGACCCTTCAAGTGCGGCGTGTGCCAAAAGTCGTTTGCCTTCAAGCAAGGACTGGAGCGACACGAGGTGATTCACAGCTCGAATTTGCCTTTCCCTTGCCAGTATTGTAGTCGCAGCTTTGTGACCGCTGGCAAGCTGGCGCGTCATCTGCAGGCGCACGCCGGGAAGCGTGCTTATCCCTGCAAGTATTGCAACAAATCCTATTTGTTATCGCATCATCTGTCGCGGCATCTGCGTATGCACAAGCAGGCACCGGCTGCCTCCTTCATATGCAGCATTTGCAAGGACACGCACGAGACCTACGACAGCCTGGTGGATCACTCGGCCATACACGCCAGTGTCTCCTATGTGTGTCCGCTGTGCAAGGCGAGCGTCACGGACTATGACAGCCTGGAGGCGCACATGCAAGCGCACAAGGAGAGCGAGCGACATGCCTGTGAATTTTGTGACTTTATATTCCTCAATTCAAGTCAACTGCAGAAGCATATCGAGGATGATCATGTGGTGGACATGGTGCCGTATCAGAATGAAGCCGAGTACTCGCCGGCAGACAAGGCTGTGAAGGAGGAGTCCGACTTGTTGGAGGAATTACTTGGTGAAGATGATGCTGTATCTGTATCGCCACCCAAGGCAAAAGTACGCAAACTGAATCCCAGCCCCAAGGCGGTAGCTACCGACAGAAAGGAAACTAAATCAGAGCACAAGTCGATTAAAAAGGAGCACCACTCTTCGTCGAGTGATTTACGAAAAGCCAGCACCTCAAGGGCCAGTGAGAGTGCGTCCATCTCCTCGGAAGGCAAACGCCACACACGCAGCAAGGAGATTAAAGAAACTACAACCAAGTCAAGCGCTTCAGCTAAAAAAGTGACCAAGACGTTGGAAGATCAGTCAAGAAAGTCAGGAAGCAAGCAAAGGAATGGAAAGATGACCAAGACATCGAGCTCAAAGTGA
Protein Sequence: MNACSVATSCTATSAHVASDDGMPSYICLDCRLLFEHCYRFKQMCKNAETLLRQYPLTGKWPEPLEKPRAPLVSNQANQAKKPMQTEVQPKKLLNSMAKSNNVTIESVQVLETSALTKKLLNVAATNTAEPPVPVKLVAAKRPHSQSYQVKLENSEELSMDDVHNLIADMGLEEEFENPTPTSPVKSVSASKPKVLNKSSMRILNKGSSATVEPRLATPQLKHYEDGNVALVTEILDPNEIDAAADPVKNAEPVATNVFPCPHCERSFPLMQLLDIHLVNHTRERSFQCAECNKSFFSKYDLQKHNFIHTGERPYKCSVCASSFTRRALLHRHERIHTDVPKFICLYCEKPFISREEMEKHAERHTKNRPFKCGVCQKSFAFKQGLERHEVIHSSNLPFPCQYCSRSFVTAGKLARHLQAHAGKRAYPCKYCNKSYLLSHHLSRHLRMHKQAPAASFICSICKDTHETYDSLVDHSAIHASVSYVCPLCKASVTDYDSLEAHMQAHKESERHACEFCDFIFLNSSQLQKHIEDDHVVDMVPYQNEAEYSPADKAVKEESDLLEELLGEDDAVSVSPPKAKVRKLNPSPKAVATDRKETKSEHKSIKKEHHSSSSDLRKASTSRASESASISSEGKRHTRSKEIKETTTKSSASAKKVTKTLEDQSRKSGSKQRNGKMTKTSSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00523157;
90% Identity: iTF_00585411; iTF_00534035; iTF_00586148;
80% Identity: -