Dsub012360.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila subobscura
Gene Symbol
pnr
Assembly
GCA_008121235.1
Location
NC:14961987-14969006[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-16 4.9e-13 48.0 2.4 1 34 667 699 667 701 0.98

Sequence Information

Coding Sequence
ATGAAAGTTTACTTAAAaagtgcatgtacatataactATTTAATTATGTATAATGTACCACACAAGTTTCATCAAGTTTGTCGATTGTGTCTCACATTGGTTAATGAGTGCGATATTTCGGAActacaaatttataatatcCCGACACGAAGCAATAAAAGAGACAAATTCGaacacaataaaaacgaacagataaatgaacaaaaaaagtcTTATAAATGTTTCTGCAATGCTCCGAGCCCAAATGTATGCAGCTGTAGAGATGATAACCTGCTATCAGTGGTTTTGACCAATAATGAAACGGGTCCAAGTAAACCTCttcacaaaacacaacacacaccgaGTGTGCCTTACGCTAACAAAAAAACCACATTGTGCAGTAGTGAACAATATGCTATGGAACCCGAAGTTTCCGGTAGTTCAGTATTAAAAAATCAGTcgtcaaatcaaatcaagctGCATCAGGGGAAaaaggaacaaacaaaaacaaacctgGAAATTCAGATGGAGCAACGTTTACTTCATCAAGATGATTTAGTTTCCGATaaagtaaaatcaaatttatgccAATCACTTCATACAATTAATAGCCACAGCCAAGAGCACCGAGATGACTCATCCTCACATATTACATTTCAGATAATCAACTGTCTCTCTATAAAGCCATTGCCTGATGATGGGTTTCCGAACGTAATTTGTCGTGAATGCCGAGCCAAGTTGGATTGTTTTGGAAAATTTCGAACTATGGCACATAATTCCCACAACGCCTTAAAAGAATTTTTAGCTATATCTGAAACTCTAAAGCTTGACACTAATGATTTGGAAATACAGCTTGATACAGTTTTAAAGTCTTCGTCGGAGGAAATAGCAGCTAAGGCCCTGACTGAGCTAAGCACTTTTTCCCAACTGAAGTACGACAAAAAGAAAGTAGATTCCACTTTTCAAACTACTTTTGATCGAAATTTTAAGAGTGGAACCCAAGATTTGCAAACCCATACATTATATCCAAGTCCTTTTCAACCAAGCAATGTTGAAAGTGATGAGACTAAAACGCAATCTAAATGTATGTCTGGGCCAATACATGACCGATTCGATTCAGCATTTCATAAAGATTCTgaaattgaacaatttcaaagcttgcaacagcaactggaGACTGCTGCGGTTCTTATGGATATAAgtaaaaaaattgtaatttcacCTCCGTGCTCGAATCCTCAATCTCCACGAAATTCTGCAGTAATTGATACAAGTATTAAAAGTTCTGTGATAAAATCAAGACGTCCATcaaagaaaaatgatttttatgacGGAGTTGAAATGGATCTTTCCGTGAAAAAGAAAAGGTATGATTATTCAAATCAAAGAAACTCAATCCCAATACACACTTTTTGCCAAACTCCAATACAATCACATAGAAGTGAAGAGGATCTTCAGAACTACAGTATTACCATTACCCAACATGGCGGGTCAGATTATAAACTTACACCAATAATAAAAACGAACAGCAGTTCCTTGTTAGATTCTGGAGACAGTTCTGACTCTCATAAACTAGAAATGGACATAACATCGTCTATCAATGAAAGAAAGACTCCCGACAGTGTCAGCTCGGATCACACAACAGACGCAGCTACCACTCAACTCTGGCAAGCTCTGGCACGATCAGCTGCTAAAAACAAGGAAGAAGACGCAAAAGAGATGCTCCGCAACATGATGAGTCAGCCTTTCGTATTTCCAGTGCCGTCAACAGTATCATTTACAAAAGTACCTGAAGAACCTATAGCGCTATTGAAGGACCTATCAGATGCTCAAACCAGCAAATTAAAAACCTGTAGAAGAAAACAAAGTTTTCCCACTAAATCCGATTGCAGCGACACAAATAATGAAAAGGGGACAGAAACTTACAATCATTCAGATCCATTCGATCCAGAAGACACAAAAGATAAAAAGAGGAttcacatttttaatgcctTACCTGGTGTTCAGAAAGACATGTCTTGTTCTAACTGTGGAACTCTTACCACAACGATTTGGAGGCGAAGTGTTCGAGGAGAAATGGTGTGCAATGCATGTGGGCTATATTTCAAGCTTCACGGAATCAACAGACCACATTCAATGAGACGCGATACTATACACACCAGACGCAGGCGTCCTAAGGAATTGGAGAGATCTAAAAAAAaacaaaagcaaatatctTGCTCTTCAATGGAACAAgcgaaaattgattttttgacGTCTCAAGAACAAATTAACATTTCCGGTCTTGTTTTAAATAAACGCAAAAAGGAAATTGATGAAAccgaagctgcagcagcactcaaagatattttattaaaaggcaaaaagtcGAATTGCTTAGCGTCGTTTAGTGACAGCTGTGAAACTGCGGAATTGACTGTGCCGCTTAATCTTGTTTCCAGTGAAAATAATTCGAAGTTTACATAA
Protein Sequence
MKVYLKSACTYNYLIMYNVPHKFHQVCRLCLTLVNECDISELQIYNIPTRSNKRDKFEHNKNEQINEQKKSYKCFCNAPSPNVCSCRDDNLLSVVLTNNETGPSKPLHKTQHTPSVPYANKKTTLCSSEQYAMEPEVSGSSVLKNQSSNQIKLHQGKKEQTKTNLEIQMEQRLLHQDDLVSDKVKSNLCQSLHTINSHSQEHRDDSSSHITFQIINCLSIKPLPDDGFPNVICRECRAKLDCFGKFRTMAHNSHNALKEFLAISETLKLDTNDLEIQLDTVLKSSSEEIAAKALTELSTFSQLKYDKKKVDSTFQTTFDRNFKSGTQDLQTHTLYPSPFQPSNVESDETKTQSKCMSGPIHDRFDSAFHKDSEIEQFQSLQQQLETAAVLMDISKKIVISPPCSNPQSPRNSAVIDTSIKSSVIKSRRPSKKNDFYDGVEMDLSVKKKRYDYSNQRNSIPIHTFCQTPIQSHRSEEDLQNYSITITQHGGSDYKLTPIIKTNSSSLLDSGDSSDSHKLEMDITSSINERKTPDSVSSDHTTDAATTQLWQALARSAAKNKEEDAKEMLRNMMSQPFVFPVPSTVSFTKVPEEPIALLKDLSDAQTSKLKTCRRKQSFPTKSDCSDTNNEKGTETYNHSDPFDPEDTKDKKRIHIFNALPGVQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGINRPHSMRRDTIHTRRRRPKELERSKKKQKQISCSSMEQAKIDFLTSQEQINISGLVLNKRKKEIDETEAAAALKDILLKGKKSNCLASFSDSCETAELTVPLNLVSSENNSKFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00575233;
90% Identity
iTF_00515258;
80% Identity
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