Dsub002815.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila subobscura
Gene Symbol
srp
Assembly
GCA_008121235.1
Location
NC:3382821-3393498[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-18 5.3e-15 54.3 2.7 1 35 818 851 818 852 0.97

Sequence Information

Coding Sequence
ATGACCAAGACCACTAAGCCCAAGGAGAAGGGGCCGTCAACGCCGGCGCGTGCTTCCACCAATTTGCTTGCAAATGCGGCCAAAATGAAGATCACCAAAGCCCTGTCCAATGCcaagacgcagcagcagaacaagcAAGGACGTGCTGCTGcatcagcaacaaaagaacCAAAGCAACaagagacaacagcaacaggatcaaatgcagcagcaacaacaacagcaaatgcagtcgaagcggcagcagcgaaagagaCGACTATATCAGCTCTTGCGACCGAAACGGAGCCTACGACAGAGgccgagacagagacagagactcggtccgccgccaccgccgacgACAATGAGGCAGCGCCGACGTCGGCGTCGGCCACAAATTTATCGTCATTTGAGTCCGCGCGTTTGCAGGCTCACACTTCAGTTGCATCGAAACTCACAAACGAAACGGTTACCACCAGCGACACTCTAACAGTAGATTCCGCAGCTGAAGCCACATCAGTTACCGCAGAGATCGAGAGAGATCCTAATCGTGAAGCGGCGGCGCTAAACAACGGTACTCAAGAGAGCAACAACGCGAGTGAAAGTGTCGATAATAAGATCAAAGTAATAAACTAtgcgcatcagcagcaccaacaaatctacgatcagcagcaacaacaacaacaacaacagcaacaacagtttcTCAGTCAGCAATTAatacaagaacaacagcaccaacaggAGCAACGTTGGTTGGCCTACGATTTGACAAGCGGATCCGCAGCAGCTGTGCAAGCAGTCCAAGCAGTGGAGCAAAAGCCAACCGATTTGTATGCGTTGGCAGCCTCGCATCATTTCTTCGGACATCTGAGCTATCCGCCACCGCATCCACCCGCACAGCTGTACGAACACTACCAGAGCATCACCGGCGCAAGCACGGATCCATCCATAATGAGGAATAACTTTGCGCTGTACAGCGTCTATggtgggggaggaggaggatcggcgggaggagtaggagcaggaggaatGATCACTCACGATCATGTGgtggcagccgccgcagcggcagcgaatgCCCAGAATACGCCCAACATTGACGAGGTCATCCAGGACACACTGAAGGATGAGTGCTTCGATGATGGGCACAGCACCAGCTACCACATGCTTACCTCCGTCTCAGATTTGCATTCCCTGAAGGATCCCAGTCCCACCATTTACTCGCTGacacaccagcaacagcagcagcagcaacagttgcaacaacaattgtaccaccaccaacaacagcaccaccatcaCAACATTTCCGCCAGTTCGGCAGGAGGGGATTCCCCCTCGTCATCATCGCATGCATTGTCCTCGCTCCAGAGCTTCACGCAGCTGACGAGCGCCGGCCACCGGGACAGCCTCTCGCCGGAACAGCATGGGGGATACTTCAGTCCCAGCCTGCAGACAACCAGTTCCGTGTATGCGGGACCCCTGCTTACCCAAGCGGCAAATGGCATGCAGTACGGAATGCAGTCTCCAAACCACGCCCATgcgcatctgcagcagcagcagcatccccatcagcagcagcatcattcccaccagcagcagcacaatcctcaacagcaacagcagcagcagcagcagctccatcagCATCACAAttctagcagcagcagcccaggaCCAGTGGGCCTGGCCACTGGAACGACTGTCAATGGCAGTGGGCTCCTGGACGATGGCTATGGCTCgccaaagagcagccacagcggcggcggaggaggaggtggaagcGTCGGCGGTGGCACATTGCCCGCCTTCCAGCGCATTGCATCGGCGAGCAGCggctgggcagcagctgggagTTTGCGTGCAGCAGGAGCGCgtgatgttgctgccgcaACTGGTTGCTGTGCGTCGTCTGGCGGCTCCAATGGCTCCTCGGTGGTCAGTGGAGCTGAACGATCCGCTGGCTACGCATCGCTGGTCAATTATCGCACTCAGAACGATGCCTGGCCGGGTCATTACGAGCCAATCAGTTACGCTGCAGCCACCGCATCCGGTGTCCAGACGCAGCTCGGCAGCGGCCTTGGTGGGGCCGGCGTAGTCACGAATGTGATCCGCAACGGCCGAGAGATCTTTGcggcaaatgcagcagcagcagcggccgtaGATGGCGCCGCAGGACGAGTGGATCCAGGATCCTACCTAACAGCATCAGCCTCGCTGTCAGCACTGGCCGCTGAATCAGGCGGGGATTTCTATAAGAGCTACCAATTTAATGTGAACGCCAGCCGTAGTAAGGCCAACACTCCAACAGCCattgctactgctgttgcaactgcgGGTGGTGCAACGGCAAACCCGACAGCGACAGCTTCGACGGCAgcggcaaatgcaacagcGACGCTTGAAGAGCATGTTAGTCGCGCCAATTCGAGACGCTTGAGTGCCTCGAAGCGCGCTGGTCTGTCGTGCAGCAATTGCCTAACCACCTATACATCGTTGTGGCGCCGCAATCCTGCGGGAGAGCCTGTGTGCAATGCCTGTGGGTTGTACTTTAAGTTGCACAGCGTCACACGTCCTCTGGCCATGAAAAAGGATACCATTCAGAAACGAAAGCGCAAACCCAAGGGAACAAAGAGTGAAAAGtccaagaaaatgaaaatggcactGAATGCCAATCTAGAGGGCGGTGCAGGCGGTGGTGCCGGCTCAGCTGGCTCTGGTTCCCACAATGTGGGTGGCATGGGCTTAGATGTGAATGAAGATATGAAACCATACATGCCATACACCACAACCACatcgcaacagcagcagcagcaatcacagcagcagcagcaacagcagcatcatcagcagcaactcATTGCTGATCAACAGCAGCATTCATCGGCTGCCAGTTCGCCCCATAGCATGGCCTCCTCCTCATTGTCCCCCTCAGCCACATCACattcgcagtcgcagtcgcattcgcatcatcaacagcagcagcaacatcagctgTGCTCTGGCCTGGACATGTCGCCCACGTCGCCCTATCAAATGTCACCCATcaatatgcagcagcagcaacattcatcccatcagcagcaacagcaatcctgcagcatgcagcagcattcgCCCAGCACTCCCACCTCAAGCACGGCCTCCATTTACAACACACCATCACCCAcccatcaacatcatcaacatAATAtccacaataacaacaacaatagcacattgttcaacaacaacaacaacaacaaccacaacaacaatattaGCAATGAGAATAACACGAAAATTATACAGAAATATCTGCAATCTCAACCATTGAAcgggagcaacaacagcaacagcaacagcgggaGCACGGATCTATTGGCGCACCTAATGCCGAACTCCATTACGGCGGcagcactagcagcagcagcagcagcacagacaaCGATCAAGCCAGAAGTCACATcgtcagccacagccacaatcaCGGCATCAACACCGACCACGGCATCGAGCACATTATCCTCACTGAgcctcagcaacagcaacagcaacattatCAGTCTGCAAAATCCCTATCAACAGCTGGGGCTTGGGCAGCAGGCGATGGCATTGTCTAAGCAGGGCGGACGCAGTGCTTCCCCGCCCTACTATCtcacggaggaggagcagcacatAAAACTCGAGCAGATGgaacatcagcatcatcaggAGCAGCCCCACTCGCACACCcttcagcagcatcatcatcagggaGAGCTAATGCTCAGCCGATCGGGCTCGCTGGACGAGCACTACGAACTGGCGGCCttccagcggcagcaacaggagctTCATCTCCAACAGAGTTTGCTCCACGAGCAGCAAGTCGCTGTGGCCAGCTATGCCATGcaggccaagcagctgcaggagctggagcgtAAGTACGGTGTGGATCGGGAGACTGTCGTGAAGATGGAGTAG
Protein Sequence
MTKTTKPKEKGPSTPARASTNLLANAAKMKITKALSNAKTQQQNKQGRAAASATKEPKQQETTATGSNAAATTTANAVEAAAAKETTISALATETEPTTEAETETETRSAATADDNEAAPTSASATNLSSFESARLQAHTSVASKLTNETVTTSDTLTVDSAAEATSVTAEIERDPNREAAALNNGTQESNNASESVDNKIKVINYAHQQHQQIYDQQQQQQQQQQQQFLSQQLIQEQQHQQEQRWLAYDLTSGSAAAVQAVQAVEQKPTDLYALAASHHFFGHLSYPPPHPPAQLYEHYQSITGASTDPSIMRNNFALYSVYGGGGGGSAGGVGAGGMITHDHVVAAAAAAANAQNTPNIDEVIQDTLKDECFDDGHSTSYHMLTSVSDLHSLKDPSPTIYSLTHQQQQQQQQLQQQLYHHQQQHHHHNISASSAGGDSPSSSSHALSSLQSFTQLTSAGHRDSLSPEQHGGYFSPSLQTTSSVYAGPLLTQAANGMQYGMQSPNHAHAHLQQQQHPHQQQHHSHQQQHNPQQQQQQQQQLHQHHNSSSSSPGPVGLATGTTVNGSGLLDDGYGSPKSSHSGGGGGGGSVGGGTLPAFQRIASASSGWAAAGSLRAAGARDVAAATGCCASSGGSNGSSVVSGAERSAGYASLVNYRTQNDAWPGHYEPISYAAATASGVQTQLGSGLGGAGVVTNVIRNGREIFAANAAAAAAVDGAAGRVDPGSYLTASASLSALAAESGGDFYKSYQFNVNASRSKANTPTAIATAVATAGGATANPTATASTAAANATATLEEHVSRANSRRLSASKRAGLSCSNCLTTYTSLWRRNPAGEPVCNACGLYFKLHSVTRPLAMKKDTIQKRKRKPKGTKSEKSKKMKMALNANLEGGAGGGAGSAGSGSHNVGGMGLDVNEDMKPYMPYTTTTSQQQQQQSQQQQQQQHHQQQLIADQQQHSSAASSPHSMASSSLSPSATSHSQSQSHSHHQQQQQHQLCSGLDMSPTSPYQMSPINMQQQQHSSHQQQQQSCSMQQHSPSTPTSSTASIYNTPSPTHQHHQHNIHNNNNNSTLFNNNNNNNHNNNISNENNTKIIQKYLQSQPLNGSNNSNSNSGSTDLLAHLMPNSITAAALAAAAAAQTTIKPEVTSSATATITASTPTTASSTLSSLSLSNSNSNIISLQNPYQQLGLGQQAMALSKQGGRSASPPYYLTEEEQHIKLEQMEHQHHQEQPHSHTLQQHHHQGELMLSRSGSLDEHYELAAFQRQQQELHLQQSLLHEQQVAVASYAMQAKQLQELERKYGVDRETVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00564313;
90% Identity
iTF_00515256;
80% Identity
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