Dsub003383.1
Basic Information
- Insect
- Drosophila subobscura
- Gene Symbol
- pnr
- Assembly
- GCA_008121235.1
- Location
- NC:3342034-3348099[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-18 9.3e-15 53.5 3.2 1 34 160 192 160 194 0.97 2 2 3.6e-19 7.9e-16 56.9 6.7 1 35 217 250 217 251 0.98
Sequence Information
- Coding Sequence
- ATGGGCATCTTGCTGAGTGATGGCGATTCCACATCGGACCAACAGTCGACTCGCGACTATCCGCACTTTAGTGGGGATCATCAGAACGTGCCGCCGCAGGTTGCGCCCAGCGTCAAGATGTACCACAGCAGCGCCGTGGCGGCCTACACGGACCTGGCCGCCGCCGGAAGTGCAGCCAGCGCAGGAGTTGGAGTCTCCGGCTaccaccaccagcaggccGTTAATGCACCCGTCTACGTGCCCTCCAATCGCCAGTACAACCATGTGGCCGCCCATTTTGGgagcgcagctgcagcgcagAATGCCTGGACAACGGACAGCTTCGGGTCGGCGCATGCGCAGCTGCCGGCGCAGTTCTACACACAGAATGCGGCCGTGATGATGGGCTCATGGAGGAGTGCCTACGATCCCACGGGATTCCAGCGATCCTCGCCCTACGAGAGCGCCATGGACTTTCAGTTTGGCGAGGGACGCGAGTGCGTCAATTGTGGGGCGATCTCGACGCCGCTGTGGCGACGGGACGGCACCGGACACTATCTGTGCAACGCCTGCGGGCTCTATCACAAAATGAACGGCATGAACCGACCCCTGATCAAGCCCAGCAAGCGCCTGGTGAGTGCAACGGCCACGCGGCGACTGGGGCTCTGCTGCACCAACTGCGGCACCCGCACCACCACCCTCTGGCGGCGCAACAATGACGGGGAGCCCGTCTGCAATGCCTGCGGCCTCTACTACAAGCTGCATGGCGTCAACCGTCCGCTGGCCATGCGCAAGGATGGCATCCAGACGCGCAAGCGCAAGCCCAAGAAAACGGGAAGCGGCTCTGCGGGCGGGTCAGGAGCGGTAGCTGGCTCGGGTGCGGTCCTGGAGGCCATCAAGGAGTGCAAGGAAGAGCACGATCTCAAGCCATCGCTTAGCTTGGAacggcacagccacagcctcagcaaGCTGCACACGGATctgaagagcagcagcagcggcagcctcatGGGGCAGCAtcatgtccagcagcagcagcagcaacagcagcagcaggcccatcagcagcagcagcaggcgcaccaGCAGTGCTTCCCACACTACGGACAGGCAGCgacgcaggcgcagcagcaggcgcagcatcagcagcacggCCATGGCATGAGCACACCTTCCGCGGCGCAATCGCAGCTGAGTGCCCGGCAGATCCATGGAGCCACCGGCTCCCAACTTTACACGCCCGGCAGCAGTGCGGGCGGAGCGGGATCCGGTGCCTCGGCGTACACCTCGCACAGCGCCGAGACACCTTCACTGAGCAATGGCACCCCGTCTCCGCACTACCAGCATCACCACCACCTGGGCAGCTCCCACGGACaccatgtggcagcagcggcgcacCATCACCTGCAtgcggcagccgctgcagccgcttaTGGCGTAAAGACCGAGGCGACAGCCACCAACTACGACTACGTGAACAACTGTTACTTTGGTGGCACCTTTGGGGCACTGGGCGGAGCAGCCTCGACGGCCGCCTTGGCGGGGGGAGCCGAGTTGGCCGGATATCACCATCAGCACAATGTCATCCAGGCGGCCAAGCTGATGGCCACCTCCTAA
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPHFSGDHQNVPPQVAPSVKMYHSSAVAAYTDLAAAGSAASAGVGVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAAQNAWTTDSFGSAHAQLPAQFYTQNAAVMMGSWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSAGGSGAVAGSGAVLEAIKECKEEHDLKPSLSLERHSHSLSKLHTDLKSSSSGSLMGQHHVQQQQQQQQQQAHQQQQQAHQQCFPHYGQAATQAQQQAQHQQHGHGMSTPSAAQSQLSARQIHGATGSQLYTPGSSAGGAGSGASAYTSHSAETPSLSNGTPSPHYQHHHHLGSSHGHHVAAAAHHHLHAAAAAAAYGVKTEATATNYDYVNNCYFGGTFGALGGAASTAALAGGAELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00597017;
- 90% Identity
- iTF_00515255;
- 80% Identity
- -