Basic Information

Insect: Drosophila subobscura
Gene Symbol: jing
Assembly: GCA_008121235.1
Location: NC:9912925-9923828[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00068 0.04 13.9 2.0 1 23 778 800 778 800 0.98

2 8 0.00017 0.01 15.9 1.4 1 23 832 854 832 854 0.97

3 8 0.16 9.5 6.5 0.4 1 19 862 879 862 885 0.81

4 8 0.00024 0.014 15.4 0.1 3 23 892 913 891 913 0.96

5 8 0.00022 0.013 15.5 3.5 1 23 919 941 919 941 0.97

6 8 0.015 0.88 9.7 0.2 1 23 948 971 948 971 0.95

7 8 0.00028 0.017 15.1 2.2 2 20 978 996 977 999 0.91

8 8 0.058 3.4 7.9 8.7 1 23 1005 1028 1005 1028 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00068	0.04	13.9	2.0	1	23	778	800	778	800	0.98
2	8	0.00017	0.01	15.9	1.4	1	23	832	854	832	854	0.97
3	8	0.16	9.5	6.5	0.4	1	19	862	879	862	885	0.81
4	8	0.00024	0.014	15.4	0.1	3	23	892	913	891	913	0.96
5	8	0.00022	0.013	15.5	3.5	1	23	919	941	919	941	0.97
6	8	0.015	0.88	9.7	0.2	1	23	948	971	948	971	0.95
7	8	0.00028	0.017	15.1	2.2	2	20	978	996	977	999	0.91
8	8	0.058	3.4	7.9	8.7	1	23	1005	1028	1005	1028	0.96

Sequence Information

Coding Sequence: atggataACAAAACTAAACAGTTGGATTTTAAATTACTGGTGGATCAGTCACTAAATCTACTGGACAGCCTCAATACGGCATTGCGGTGCGATGCTATACAGTTTTTGCTGCAGACGCTCAAGTGCAAGTATCCGGACGCCTGCGACCAAGTCGTCAGGAATCTATTCAGTCACATAACCAATGATAATGTCGGAGGGCTGGCCGTGCGCCAGGAGCTAGCGAAGAGCGAGCAGCTCAcgcagctgctgttggccaccaaaaaggagaaaaaagaaaaaccggAGCCAGACAGCGGTGGCGGTGGGACCGATCCAGAGATCAAGCGGGAGCATGTTGTGCAGGAAGACGAAGCGGAGGAGGCGGGCTCCACGGATCTGAATCAAAACTTTGAGAAAATCCTCTGCAAAGAGGAGTTTCTGGGCctcgacgacgaggaggaggacttcCTCCATGATCCGGACACTGAGAATTCGTCTTCCCTGCAATTCCAGGCTGGCAACCATGTGGATGCACTCGGTCCTGGTGATCCGCTAGATCTGATTCAAGGCGGTGGCTCCCTCCTGGTCAAGCGGAAGTACGAGGCGACTTTCGGTGCCGAGGTGGCAGAGGAGAACCACctggatgaggatgaggatgtggcCAATGGCAGCaccaacggcagcagcagcgacggcaaGCTGGTCAAGCGGATGCGAACCAATAACATGCacgtggctgtagctgtgggggtgggtgtgggtgtggggttggggttggcgAGTGTGAGGAGGAAAGAGGAGAGATCCAGCCTAGGCGAGGGCTACGTCTTCCACGAGGACAGCCAGTACACGCTGCGATATCACCACAGTACCGGGGAGTTCAGTGAGCGGGCTTTTAAGGCTCAGTTCCGTGCTCTGTTGCGCCTGGCGCTGAGTCAGCACCACAAGCCTTTCCTCAAGCAGTTCTACGAGAACTTTGTGGAGAACGGGCGGCTAATGGGCACTACGCCCTCGACGAGAGTGTTGAAGGAGCTCCGGGATCAGCGATTGGAAGAGTGGCGGAGGCAGCGGGAGCGTCGCCAACTGGTCAGCCTAATGAAGGAGGAAGAGATTAAGCAGCAGGAAATCCAGAATCAGCAAGAGATTCAGGAGAAACAGGAACTGCAAGACCAAGAGCACCTGCTACTGGATCGGGAGCAAGAGCcagaacaggagcaggagcaggagcaggagctggtcCCACAGCTGCCTGCCATCTCATTCGGCGACTCGGAGATCGAGATGGAGTCGGAAACGGAATCACAGCTCTCGTCGGCAGCTCAAGAGATTATGAAGTTTGAAGAGTTCATTGACGACGGTGTAGGCGCAGGACGTCTTATCGATGGTCTGGAAATGGAGCCGGAGATAGATGACATGCTCGCTGGCGCCGGCAGTGCCCTGTGCAGCGTCAACAGTGcgagcggcaacagcagcaacagcagcagcagtgggagtgggaatggtaatgggaatggaatAGGAATCGGAATCAGCGGGGTTGTCCTGGAGAACAATAGTCATCATTCGCATCACCTaagtagcagcagcagtgcaaatCTTGTGATCAACGGCCTTACGTCAAGCAatagcatcaacagcagcaacataaacaacaacaataataataataacaataatggCAGTCTACACTGTCAGCCAATGGCCctgcacgggcacgggcaggggcagggacaggatCTGAGACCGGTGCAGGAGCAGATAGCACCAGGCAAGCCATCGCTACATCTGCCCATGAACATGCCCCTGGAGAGCAGAGACCtgaagggcagcagcagtcagcagggACACATCATGATTTCGGGAGGAGGTAGCTCTAGCGTCCACGCCAATGAGATTCAGCAGCTCCATCAGCATCCAAATCACTACAACTCGAGCAACAATCCCCTCTCCATGATGGGTGGCatgatgcaacagcagcacgtgaatctgcagcaacagcagcagcatcagatgATGCAGGGACAGTTCCAGCAGCATGGCGTCTCCATGATGAACAACCGCCAGGTGCCTGCTCTGGCTGCCTTGTCGAACCTGGGAGATGATTCGCCAGTTTCGAGCAATGTCTGTGGCCAGCTAAACTcctcgctggagctggacgacAATGATCTGTCGCCTGACGAGGATGACGACGAGCTGGACACTGAGCTGGATGAAATGGATGCGGCCAAGCAGCAACTGATCgatggcggcagcagcagcagcacctcgcTGCAGGCGCCGCCCTCTCAGCATGGCAGCGGTAGTGGCGGCAGTGGGGGACACACGCCTGGCAGCAAAAAGGACAAGCCCATCTACAATTGCCTTTTGTGTCCAAAGTCCTATCGCAAGCGAAAATCTCTGCTGGATCACTATAAAATGCATCCGGGCTTCTGTCACGATTGCGGCCAACCCAATGGCAACACGTTAGAGGAAATAATCCATCACAATCGGACGATGCACGTGAAGGAGTTCCCGTTCGTGTGCGAAACCTGCGGCGAGTCGTACTCGCGGAAGCAACAGTTTCACGCCCATGTCGATTCGCACAGCAAGAAGGATTTCAAAACCTTTCCCTGCGGCGAGTGCGGGCTGAAGTTTCCGcagaagaagctgcagcagcatttcgAGGAGACGGGACACAAGGCGGACGGCGCCATTTGCGAGGTGTGCGGCGAAGAGTTTACATCAAAGAACGCCCTGTACCAGCACATAATACGTGTGCACAAGCGAGACAACTTCTTTGAGTGCCACATTTGCCATAATCGCTTCACATTGAAGGCCAATCTGGAGCGGCATGTGCAGCTGCATACGGAGGTGAAGCGCACGTATGTGTGCGACCTGTGCGGCTCATCCTACTACACATATCCCGCACTCAAAGAGCACTACAGCAACGCGCATGTGGATGTGTCCGAGTGCAAGTGTACGCTGTGCGGCAAGCGCTTCGGGTCGGCCAAGTCGCTGCAAAGGCATCTGCCGTCTCACTCGGAGGAGCGACCGCATTGCTGCAACTACTGCGATCAGACCTTCAAGTGGAAGACCCATTTGGTGCGACACAAGCAGACGATGCATGGAAATCAAACACCGCCGCCTAAGAAGGGAAAGCAGCGCTTCCCCAAAGCGAACGAAGAAGCTGAAATGGCTGCTCTGCCGGATATGCCAGGTCCGCCGCCTGTGAAGGCTAGCAAAAAGTCAACGACCGGCAAGGCAAAGTCACTGGCTGGAGCAGGCACAGCGGGGGCTGccctgcagcaacagcagaagggATCTGCAGCGACGCccacaccgccgccaccagTTTCAACGACCCCGGGATGCCTGCAGCAGGATCAATTCAATGCGGCGATggtcagcagcaacagctcgcAGTCCTCAACGGCGTCCACGTCGCAGCATTCGGTGTCGACGAGTGAATCTCAGCAGAATTCCATGTACAATCAGAGCTTTAACGCTGAGAAACTGCCGCCAGGCCAACaagcgccgccgccgcctccacaacagcagcagccaccgccaccaccaccaaatgCTTTGCACCAGCAACATCCGACGCCACCtccaacacaacaacaacaacagcagcagcagcaaccgcgtGCCAGCCCGGCTGACATGCATTTGCAGCGAATGAATAGCTTCGGGCAGGAGGGGCAGTTTCACTTTGAGGCGGGCCAAGCGGCGGGAAGCtatcagcagcaccagctgatCAGTcagtatcagcagcagcagcaacagcatctgAGGAGTCACACTCCACAGAGTCCACATGCTGCACATCCTCCACATCCAACGCATCCATCgcagatccagcagcagcagcaaccgcagcacTTCAGTTCCCCTCACCATATGCCGCCAatgcaccaccagcaccagctgatgatgcagcagcagcatcgtcaTAACCAGCGTTCGCCATTGCACCACCATCCCTcaacgcagcagctgcagcagcagcatcagcagccgtCGCATTCCCCACAGCATGCGAGACTGCAGTCGCCGCAACCTCCGCcagtacaacaacaacaacagcagcagcagcagcaacagcaacaattccTGCAACAACAGGCCGCAGATTCGTGGGGCAACATGAACTTTGGCAATCCCCCCAACAACcagcaggagctgaaggaTAACAAATTCTATATTGTAGATTCGGCCGAGTTTCTAGGGCTTCCAATGAATGTGCCGCCagcccaacagcagccaccacaaaCTGTGAgcaaaccgcagcagcagcagcagcaaccgccgccgcaaccacaacagcagccccAACAAGATCCCGCTCTAGCTGGTGATCTTATGAGCTTCCAGCACATGTGGCCGGCGCCCGGTTTCAGTCAGggaccacagcaacagcagcagccccagcagcaacagccgcagggGCAGGCCAATCCGGGAGATCCtcacaattacaacaacatCGGCAGTATACTCACGAATCTCATTGACAGCCCCGCCCCAATGGAGTACAACTTCGACTTGatccagcatcagcagcagcagcagcagcaacagcagcagcagccgacggctcagcagcagcagcaggcggcgcaacagcaacatcacaATGCAGGAGGCTATCCGGGTGGCTTGATGCGAAGTGGCCCGGTTTACGGGGGAGCCTATGAGCAGCATATGAGCGAGCAGCTGGTCAgtgagcagcagaagcaaaacaGTTTTCAGCCCTATCACTTGCATGGCCAGCAGGCACAACATCCCCACTTACTGCCGCCAGCTGCAACGCATGGCAATGTGTACGAGCGGACAGGAGTCGGTGTGGGCGTCGGATACTCCATGCTAGGTGACGAGTCAAAGGCCGTGCTGCCCCCGATGATGGGCGGAATGATGCAGCAAATGCCACCCCACGGACAGCAGCCAGATCTAATCTACTATCCAGTGAAAAACGATTGA
Protein Sequence: MDNKTKQLDFKLLVDQSLNLLDSLNTALRCDAIQFLLQTLKCKYPDACDQVVRNLFSHITNDNVGGLAVRQELAKSEQLTQLLLATKKEKKEKPEPDSGGGGTDPEIKREHVVQEDEAEEAGSTDLNQNFEKILCKEEFLGLDDEEEDFLHDPDTENSSSLQFQAGNHVDALGPGDPLDLIQGGGSLLVKRKYEATFGAEVAEENHLDEDEDVANGSTNGSSSDGKLVKRMRTNNMHVAVAVGVGVGVGLGLASVRRKEERSSLGEGYVFHEDSQYTLRYHHSTGEFSERAFKAQFRALLRLALSQHHKPFLKQFYENFVENGRLMGTTPSTRVLKELRDQRLEEWRRQRERRQLVSLMKEEEIKQQEIQNQQEIQEKQELQDQEHLLLDREQEPEQEQEQEQELVPQLPAISFGDSEIEMESETESQLSSAAQEIMKFEEFIDDGVGAGRLIDGLEMEPEIDDMLAGAGSALCSVNSASGNSSNSSSSGSGNGNGNGIGIGISGVVLENNSHHSHHLSSSSSANLVINGLTSSNSINSSNINNNNNNNNNNGSLHCQPMALHGHGQGQGQDLRPVQEQIAPGKPSLHLPMNMPLESRDLKGSSSQQGHIMISGGGSSSVHANEIQQLHQHPNHYNSSNNPLSMMGGMMQQQHVNLQQQQQHQMMQGQFQQHGVSMMNNRQVPALAALSNLGDDSPVSSNVCGQLNSSLELDDNDLSPDEDDDELDTELDEMDAAKQQLIDGGSSSSTSLQAPPSQHGSGSGGSGGHTPGSKKDKPIYNCLLCPKSYRKRKSLLDHYKMHPGFCHDCGQPNGNTLEEIIHHNRTMHVKEFPFVCETCGESYSRKQQFHAHVDSHSKKDFKTFPCGECGLKFPQKKLQQHFEETGHKADGAICEVCGEEFTSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEVKRTYVCDLCGSSYYTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFKWKTHLVRHKQTMHGNQTPPPKKGKQRFPKANEEAEMAALPDMPGPPPVKASKKSTTGKAKSLAGAGTAGAALQQQQKGSAATPTPPPPVSTTPGCLQQDQFNAAMVSSNSSQSSTASTSQHSVSTSESQQNSMYNQSFNAEKLPPGQQAPPPPPQQQQPPPPPPNALHQQHPTPPPTQQQQQQQQQPRASPADMHLQRMNSFGQEGQFHFEAGQAAGSYQQHQLISQYQQQQQQHLRSHTPQSPHAAHPPHPTHPSQIQQQQQPQHFSSPHHMPPMHHQHQLMMQQQHRHNQRSPLHHHPSTQQLQQQHQQPSHSPQHARLQSPQPPPVQQQQQQQQQQQQQFLQQQAADSWGNMNFGNPPNNQQELKDNKFYIVDSAEFLGLPMNVPPAQQQPPQTVSKPQQQQQQPPPQPQQQPQQDPALAGDLMSFQHMWPAPGFSQGPQQQQQPQQQQPQGQANPGDPHNYNNIGSILTNLIDSPAPMEYNFDLIQHQQQQQQQQQQQPTAQQQQQAAQQQHHNAGGYPGGLMRSGPVYGGAYEQHMSEQLVSEQQKQNSFQPYHLHGQQAQHPHLLPPAATHGNVYERTGVGVGVGYSMLGDESKAVLPPMMGGMMQQMPPHGQQPDLIYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00474756;
90% Identity: iTF_00564215;
80% Identity: -