Dsub006124.1
Basic Information
- Insect
- Drosophila subobscura
- Gene Symbol
- ct_1
- Assembly
- GCA_008121235.1
- Location
- NC:19484229-19556669[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.3e-27 4.8e-23 80.5 0.0 3 72 1200 1270 1198 1275 0.95 2 3 7.2e-32 4.7e-28 96.6 0.0 3 77 1688 1763 1686 1765 0.96 3 3 4.4e-31 2.9e-27 94.0 0.0 3 76 1982 2056 1980 2059 0.96
Sequence Information
- Coding Sequence
- ATGCAGCCAACATTGCCACAAGCCGCTGGGACAGCCGATATGGATCTGACGGCTGTTCAATCAATCAACGATTGGTTTTTCAAAAaggagcaaatttatttattggcacAATTTTGGCAACAGCGCGCTACCCTTGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTGTCCACCAGCAATACGGATCccgccagcggcagcatccaCAGCGAGAgcgacaacagccacaaccacaacacaGGAGCGTcagccgcaggagcagcagaaggggaATCAGGCGCACAGGAGGTCGAGGATTCGGATCTGGAATTGGCCAGCGGAGGCGCTGGATCGGGATCTGGCCATCAGCTGAACAGCTCCATTGTTGCAGCGGCCATCACGCTGCAGCAGAACGGCGGCAATCTGCTGgccaacaccaacacgccGTCGCCCTCGCCGCCGTTGCTCAgcgccgagcagcagcaacagttgcagagCAGCCTGCAGCAGAACGGTGGTGGTGTCGGCGGCGCCTGCCTCAACCCGAAGCTCTTCTTCAATCACGCCCAACAAATGATgatggaggcggcggcagctgccgcagcagcagcagcagcggcggcggcggctgtccaacagcagcagcatcagcattcgCCTCTGCATTCCCCAgcagcggaggcagcagccgcagcgtcGGCTGTGGGACCCACAGATCATCAAACGGTGGCCACCGaggccactgccaccaccaccacccacacagccaccaccaacaccaccagcagcagcagcaacaacaccaccaccaacagtagcagcggcagcggcagcggcagcaggagccgcgGCAGCCACCTCCAcaacgaggatgaggagcaggacgaggacgatgatgaggacgatgaggaggagaacGCCTCCATGCAGTCGAATGCAGCGCATTtggacgatgatgacgatgacatggagctggagccccATCAGTCCCTGGAGGCCATCGAATCTGCGGCAAGAACTGAAccacaccaacagcagcagcagcagcagcagcagcagcggcagcagcagcggcagaggcatgCGGCGACTGGCGATCTGGAGGAGGTgtctgctgtggcggctgctggcgACTCGGAGCCTGTGGCAGATGATGAGGAAGCTAGTTTAAATGTTAGCAATAATCACAATACCGATAGCAATAATAGTTGTAGTcgaaagaacagcaacagcaacagcgtcGGCCCGGGTGTGGCAATGCGTGAtagcaatgatgatgatgatgatgatgatgatgtggacGATCCGCATGTGGCGGCATCGGTTCACAGTGCCGAGGATGATGActgcaccaacaacaataccagcaacaacaacaacaacggcgaGAAGCAGCGCAGGaagcgcaacaacaacacaaacagcaacagcagcaatcagCCCGCTGTGCAAATTGctgccaaagacaaagagATTAAAGCACTTCTCGATGAGCTGCAGCGCCTGCGTGCCCTGGAACAGACGCATCTGGTGCAGATCCAGCGCTTGGAGGAGCATCTGGAGGTGAAGCGGCAGCACATTATGCGCCTTGAGGCACGCCTCGACAAGCAGCAGATCAATGAGGCGCTGGCCGAGGCCACGGCCTTGGCTGCCGCCGTCAATGCggctgccagcaacaacaacaacagccagagcagcgacaacaacaagctGACTGCCACCTCGCCACtagaggcagcagctggagctggagctggagcagcagcaggcaacgaCCTGAATGCCAGCCAGGCCTCAGTCCAGGCtgaggacgatgacgaggaggaggaggaggatgaccACCATCAGGCCATGCACGTGGACAACGATGAGGGAGAAGaggccgccgccaccaccagcacccaccagcagcaggtcgacgaggaggacgatgatgaggaggatgacgagACCGAGGATCAGGAGCATCATCAAGCGGCCATGTCAAACCAAGCCACAGCCAACGCAGACAGCAGCGAGCTGAAAATCAAAAAGGAACAGCACAGTCCCTTGGATCTGAATGTTCTGAGTCCCCAGTCGGCCATTGCGGCcgcggccgctgccgcagctgccgccgcctgtgcCAACGATCCCAACAAATTCCAGGCTCTGCTCATGGAGCGGACCAAGGCCCTGGCCGCCGAAGCCATCAAGAATGGTGCAGCCGGCGGCAGTGACGCTGCCAATGCGATCAGCGAAGAGATGCCGCCGCCAGCAGAAGAGGTCAACGCctcctccgactccgactccggctccgcaggagcagcacctgcagcaggagccgcaggCGCCGCCGTTGCATcccaaaacccaaatgaaagcgaaacgcatgaaaacgaaacggaaacggatgCTGCTGAGGCAAACGATGAGCAGGCGGCCATCACGCGTCCAAAGCAAGAGCTCGAAGACGAcaatgagaatgagaacgaggatgacgatgatgatgaggcgaTCTTGCAGCCGCCCGCCACGCTTGAAGAGCAGCTGGTCAACAGCTACTGGCGACGCGGCTTCGAGAGTGCCAGCCCACTGCCGCCCAAGCCTGCCACAACAGCTGCCAccatgccacagccgcagccagggAGCAAAACGCCAACAATTTATCAAAATGTTAATgcggggcagcagccacagttgctgccgccaccgccgccaccaccgccaaccttgcaacaacaacaacaacaacattatcaacaacaacaacaacaacagcagcagcagcagcatggaccCTCGTCCACAGCGTTGCTCAGTCAATTGGTTAACTCCACTTTCTCACATGCCAatcactcctcctcctcctctcgcCTAGATGCCGGCTCCCAtccgcaccaccaccaccagcagcaaccacagtcgctgcatcagcatcagcagcaccaccagcagcagcagcaccaccacctccagcaacagtcgcagcagcacaacagcagcggcagcaacagcagcagctgcaattcGGGTCCTGGCAGCACCACCGATGGCGCCCTCAACCACCATCACGCGCACGGACATGGCCACCATTTGGTGGGCCACAATCCGCACGGCCTGCCCCACGGGCATCCGCATGGACAGCTGCTGCATCCGGCAGCGGCCCACCACCTGCACCACGCCGACTCCAACTCCTCCAGCGCCAACAGCACACCCAGCAGCACCGCCCAGCTGGCGGCCAGCCTGGCCAGCACCCTCAATGGCAGCAAGTCCCTGCtgcaggcagccgctgccgccaatGCCGCTGCCGTGGCAGCCGTCGCcgaggacaacaacaacggcctgacgcccaatgccaatgcagcggcagcagcagcggccatgGCCGCTCACGCCCAGCATGCGGCGGCCCTGGGACCGGGCTTCCTGCCCAGCCTGCCGGCCTTCCAGTTTGCCGCCGCGGCGGCCGCCAATCAGGATGCGCGCGGCCACTATCGGTTCGCGGACGCGGAGATGCAACTGCCGCCGGGTGCCTCGATGGCCGGCCGCCTGGGCGAGTCGCTGATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGGCCCTGGACACGCTGCACATCTCGCGCCGTGTGCGGGAGCTGCTCTCCGTGCACAACATCGGACAGCGGCTGTTCGCCAAATACATACTCGGCCTGTCGCAGGGCACCGTCTCGGAGCTGCTCAGCAAACCGAAGCCCTGGGACAAGCTGACGGAGAAGGGACGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGACGATAACGCCGTCATGCTGCTCAAGTCGCTGATACCCAAGAAAGATTCGGGACTGCCACAGTATGCGGGACGTGGCtcgagcggcggcggcggcggcgatgaCTCCATGTCGGAGGATCGCATCGCACACATCCTGAGCGAGGCCTCGTCGCTGATGAAGAGCAcagccgcccagcagcagcgcgagcAGCAGGATCAGCACAGCAACGAGGACAGCAAGTCGCCGCCACAGAGCTGCACATCGCCGTTCTTcaaggtggagcagcagctgaagcagcagcagcagcagcatcgcgaCCAGCAGCACATGGCCTCCGAGCAGCGGGACGCCGTGGTGgccgccgcccagcagcagcaccagcagcaccagcagcagcgggagcagcgcGAACGGGagcgcgagcagcagcagcgactccgCCACGAGGATCTGGCCCAGGACAAGATGGCACGACTCTACCAGGAGCTGATAGCCCGCACACCACGCGAGGCAGCCTTCCCCAGctTTCTGCTGTCGCCATTCTTTGGTGGTGCCGCCGGCATGCCCGGCGCGGCCAATGCATTCCCAGTTCCCGACGAGAACATGCGCCACGCCTTCGAGCGGGAGATcgccaagctgcagcagcagcaccagcagcagcagcagcagcaggcggcccaggcgcaggcccaggcccaggtccAGGCCGTGTCCGGCTTCCCCAACTTCTCCAGCCTGatggcgctgcagcagcaggtgctcAATGGCGCCCAGGATCTCTCGCTGGCCGCCGTCAAGGACATCAAGCTGAACGGACAGCGCGGCTCGCtggagcacagcagcagcagctccaaggaCGGCGACCGCGACGATCCGCGCGACTATCCGCAGTCGCTGCATGGCCGCAAGTCCGACACACCGGCCCCACCCGCGCCCCCAGCTCCGCCCGCGGGCAGTGCCGGCAGTGTGCCCGGCTCGGCCAACAGCCTCTCGAGCGTCCGCGATGGCGGCGTGGGCGCCGGCGCCGGCGCCGGCTCCGTTGGGGCCGGCAGTCATGCCAGCAACTCGGCCGCACCCAGTCCGCTGAGCAACTCCATCCTGCCGCCGGCGCTGAGCAGCCAGGGCGAGGAGTTCGCGGCCACCGCCAGCCCACTGCAGCGCATGGCATCCATCACGAACTCGCTGATCACACAGCCGCCGGTGACGCCGCACCACAGCACACCGCAGCGGCCCACCAAGGCCGTCCTGCCGCCCAtcacgcagcagcagttcgACATGTTCAACAACCTCAACACGGAGGACATTGTGCGCCGCGTGAAGGAGGCTCTGTCCCAGTACAGCATCTCGCAGCGGCTGTTCGGCGAGTCGGTGCTGGGCCTGTCGCAGGGCTCCGTGTCCGATCTGCTGGCACGGCCCAAGCCCTGGCACATGCTCACCCAAAAGGGGCGCGAGCCCTTCATACGCATGAAGATGTTCCTCGAGGACGAGAACGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATTGCGCCCGAGAAGCTCATGCGCACCGGCAGCTACTCCGGCAGCCCCCAGATGCCGCAGGGCCTGGCCAGCAAGATGCAGGCCGCCGCCCTGCCCATGCAGAAGATGATGaacgagctgaagctgcaggaGCCCGCACAGGCGCAGCACATCATGCAGCAGATGCAGGCGGTGGCCATGTCCGcggccatgcagcagcagcagcagcaggcagccgccgccgccgccgcagccgtggccgcacagcagcagcagcagcagcagcagagccagcaccagcacccccatcagcatccacatccgcatccgcacacgcaccagcagcatcagcagcaccagcaggcagccgcagccgcccaGGCAGCCGCCGCGCTCCACCATCAGAACATGCTGCTCACATCGCCGGGCCTGCCGCCGCAGCATGCCATCAGTCTGCCGGCCTCGGGCGGCGGCGCCGGCTCCTCTGTGGTCTCGCAGCCTGGCGGCCAGGGCAGCGCCGGCGGACCCTCGGGGCCACCGTCGGGTGGCGAGAAGAAGCCCATGCTGATGCCGGTGCACGGCGGGGCACATGCGCCCAATGCGATGCGCAGCCTGCACCAGCACATGTCGCCCACCGTGTACGAGATGGCGGCACTCACGCAGGACCTGGACACGCACGACATCACCACGAAGATCAAGGAGGCGCTGCTGGCGAACAACATTGGCCAGAAGATCTTTGGGGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGGGAGCCGTTCATCCGCATGCAGCTGTGGCTGAGCGACGCCAACAATGTggagcggctgcagctgctcaagaACGAGCGGCGGGAGGCGAGCAAGCGGCGCCGCAGCACCGGACCCAACCAgcaggacaacagcagcgacacctCCAGCAACGACACCAACGACTTCTACACCAGCAGCCCCGGACCCGGCTCCGTGGGCTCCGTGGGCGGTGCGCCGCCCAGCAAGAAGCAGCGCGTCCTCTTCTccgaggagcagaaggaggccCTGCGGCTGGCATTCGCCCTCGATCCGTATCCCAATGTGGGCACCATCGAGTTCCTGGCCAACGAGCTCAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCGCACGGCCAGCCCGGCCAGGACAATCCCATACCGAGTCGCGAGAACACCAATGCGACGCCCTTCGACCCCGTCCAGTTCCGcatcctgctgcagcagcgactcgTCGAGCTGCACAAGGAGCGCATGGGCTTGGGCGGTGCGCCCATACCCTACCCACCGTACTTCGCGGCGGCCGCCCTGCTCGGCCGCAGCCTGGCGGGCATACCGGGCGCGGCggccgctgctggcgctgctgctgctgcggcggctgtgggTGCGGCCGGCGTCGGTGTGGGGgacgagctgcagctgcaggccctCAATCAGGCGTTCAAGGAGCAGATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGACGACCTCGAGATGGACGCCAGTGGCCACAACATGAGCGACAACGAGTCGCTCGAGGGCCAGGAGGCGGAGGACAAGGCCGTCTCCGAGTACGAGAAGGTCCTGCAAAAGTCCGCCCTCGCCTCGGCGGCTGCCGCCTACATGAGCAACGCCGTGCGCAGCTCCCGCCGCAAGCCGGCGGCGCCCCAGTGGGTGAATCCCGCTGGCACCACCACACCCAATGCGGGcctggcagccgcagccgtggcagcggccgcagcggcCGCCGCTGTGGCGGCCCAGGCCGGCGCGGGCAGCGACAGTGAGCGCATCATCAACGGTGTCTGCGTGATGCAGCAGGGCTCCTCCGACTATGGCCGGGACGATGCTGACGGCAAGTCCGTGGAGGCTGGCGGCAATGACTCGGAGCATGAGCACGCCCAGCTGGAGATTGACCAGCGGTTCATGGAGCCCGAGGTGCGcatcaagcaggaggaggacgacgacgaggaggaggaccagcagcagcagcagctggatggcGGCCTCGATTGCGAGGCGAGCGAGGCGGAGAAGAAGCTGAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGCGTCAGTCGCCTGAGCACCGGCCAGGGTGTCGTCGACTCTGAGGAGTCAGCAGCGAGCTGTGTCGCCGCCGCAGTGGCCGGTGGCAGCGGGAcagtggcagccgccgcccaGGCGGTAACCAGTGCCGCGCCAGCCGCTGCGTGGAACTACTAG
- Protein Sequence
- MQPTLPQAAGTADMDLTAVQSINDWFFKKEQIYLLAQFWQQRATLAEKEVNTLKEQLSTSNTDPASGSIHSESDNSHNHNTGASAAGAAEGESGAQEVEDSDLELASGGAGSGSGHQLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQQNGGGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAVQQQQHQHSPLHSPAAEAAAAASAVGPTDHQTVATEATATTTTHTATTNTTSSSSNNTTTNSSSGSGSGSRSRGSHLHNEDEEQDEDDDEDDEEENASMQSNAAHLDDDDDDMELEPHQSLEAIESAARTEPHQQQQQQQQQQRQQQRQRHAATGDLEEVSAVAAAGDSEPVADDEEASLNVSNNHNTDSNNSCSRKNSNSNSVGPGVAMRDSNDDDDDDDDVDDPHVAASVHSAEDDDCTNNNTSNNNNNGEKQRRKRNNNTNSNSSNQPAVQIAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAASNNNNSQSSDNNKLTATSPLEAAAGAGAGAAAGNDLNASQASVQAEDDDEEEEEDDHHQAMHVDNDEGEEAAATTSTHQQQVDEEDDDEEDDETEDQEHHQAAMSNQATANADSSELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLMERTKALAAEAIKNGAAGGSDAANAISEEMPPPAEEVNASSDSDSGSAGAAPAAGAAGAAVASQNPNESETHENETETDAAEANDEQAAITRPKQELEDDNENENEDDDDDEAILQPPATLEEQLVNSYWRRGFESASPLPPKPATTAATMPQPQPGSKTPTIYQNVNAGQQPQLLPPPPPPPPTLQQQQQQHYQQQQQQQQQQQHGPSSTALLSQLVNSTFSHANHSSSSSRLDAGSHPHHHHQQQPQSLHQHQQHHQQQQHHHLQQQSQQHNSSGSNSSSCNSGPGSTTDGALNHHHAHGHGHHLVGHNPHGLPHGHPHGQLLHPAAAHHLHHADSNSSSANSTPSSTAQLAASLASTLNGSKSLLQAAAAANAAAVAAVAEDNNNGLTPNANAAAAAAAMAAHAQHAAALGPGFLPSLPAFQFAAAAAANQDARGHYRFADAEMQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGSSGGGGGDDSMSEDRIAHILSEASSLMKSTAAQQQREQQDQHSNEDSKSPPQSCTSPFFKVEQQLKQQQQQHRDQQHMASEQRDAVVAAAQQQHQQHQQQREQREREREQQQRLRHEDLAQDKMARLYQELIARTPREAAFPSFLLSPFFGGAAGMPGAANAFPVPDENMRHAFEREIAKLQQQHQQQQQQQAAQAQAQAQVQAVSGFPNFSSLMALQQQVLNGAQDLSLAAVKDIKLNGQRGSLEHSSSSSKDGDRDDPRDYPQSLHGRKSDTPAPPAPPAPPAGSAGSVPGSANSLSSVRDGGVGAGAGAGSVGAGSHASNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQAAALPMQKMMNELKLQEPAQAQHIMQQMQAVAMSAAMQQQQQQAAAAAAAAVAAQQQQQQQQSQHQHPHQHPHPHPHTHQQHQQHQQAAAAAQAAAALHHQNMLLTSPGLPPQHAISLPASGGGAGSSVVSQPGGQGSAGGPSGPPSGGEKKPMLMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLGGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAVGAAGVGVGDELQLQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDLEMDASGHNMSDNESLEGQEAEDKAVSEYEKVLQKSALASAAAAYMSNAVRSSRRKPAAPQWVNPAGTTTPNAGLAAAAVAAAAAAAAVAAQAGAGSDSERIINGVCVMQQGSSDYGRDDADGKSVEAGGNDSEHEHAQLEIDQRFMEPEVRIKQEEDDDEEEDQQQQQLDGGLDCEASEAEKKLKVINEEKLRLVRVSRLSTGQGVVDSEESAASCVAAAVAGGSGTVAAAAQAVTSAAPAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00471398;
- 90% Identity
- iTF_00600959;
- 80% Identity
- iTF_00600959;