Dstu009797.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- hang
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000005.1:496480-509872[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.25 17 6.0 1.0 3 23 447 468 446 468 0.93 2 18 0.18 13 6.4 3.5 3 22 572 591 570 591 0.89 3 18 0.00053 0.037 14.4 3.3 1 22 692 713 692 715 0.90 4 18 0.061 4.3 7.9 0.1 2 21 727 746 726 747 0.93 5 18 0.00061 0.043 14.2 0.2 2 23 882 904 881 904 0.95 6 18 0.0018 0.12 12.8 0.1 1 23 912 935 912 935 0.96 7 18 1.4e-05 0.001 19.3 0.1 2 23 1022 1043 1021 1043 0.97 8 18 0.00025 0.018 15.4 2.9 2 23 1134 1156 1133 1156 0.97 9 18 0.02 1.4 9.4 0.2 2 23 1165 1187 1164 1187 0.95 10 18 0.001 0.074 13.5 0.1 1 23 1200 1223 1200 1223 0.97 11 18 0.00011 0.0078 16.5 1.1 1 23 1276 1298 1276 1298 0.99 12 18 0.0017 0.12 12.8 0.9 1 23 1306 1329 1306 1329 0.96 13 18 0.38 27 5.4 1.5 2 20 1337 1355 1337 1355 0.96 14 18 7.4e-05 0.0052 17.1 0.2 3 23 1424 1444 1423 1444 0.98 15 18 0.0044 0.31 11.5 0.1 1 23 1479 1501 1479 1501 0.97 16 18 0.00053 0.038 14.4 0.7 2 23 1589 1611 1588 1611 0.93 17 18 1.7 1.2e+02 3.4 0.3 2 20 1631 1649 1630 1651 0.91 18 18 0.0057 0.4 11.2 0.3 3 23 1666 1686 1666 1686 0.98
Sequence Information
- Coding Sequence
- ATGTGTGACACAGCGATAACGGTAAATCCGACAGCAACAATAACATCAACAGGAGCAACAGTGAATGCATCTGGACCTCAAATAGCAGCTACAATTATAGCTACACCTACAGGCAACGCTACAAAAAAAGAACCACAGCGAACGCCACAAAATTGTTGTCGCCTTTGTATTGCTCCGGCCACAGAGTGTATTTCGATCATCAATAGCTATGCAGCCGATAAGGAGCCGCTGACCACCAAAATCTATAATTGCGTCAATATCAAGATCACATCCCAGGATTGTTTATCACAACAGATTTGTCATGCTTGCATTAGCTATTTAAATTCGTGGCAAAGTTTCAAAAATCGTTGCCTTAGCTCACAGTCAAAGCAGCGACAATGGCTGGAGACGACAGTGACGGTGACAGCAACGACAACAACGACAACACAGCCGACGACGACAAGTAAAACCAAACTCCTGAGCTATTTGGACTTGAATAGTGCTGAGAATGGAACTGGAACTGGTACGGATCACCAGTTGGCGGAGGAGAATGAAGCTATTGTTGTAGGCAGCAGCGATATGAGACATCACCATCATCAGCAACCATATCGTAAACACCAACAGCCAAGGAGCAGGCGTCAGACTCAATATCAATATACCCCCAGACGTTCACGCCCGCAAGGAAGACGTGCTCCTGAACATGCAACTCCGTACACTAGTCAAGCTCCCACAATATCCATTAATCCCGCTGTCCATGTCACCACTACTCGCAAATTGAAATCAAAAATGTATTTACCGTTGGATATAACAGTGCCATCGCCTCCGATTCATGTTGTGGGTACACCACTTCATTCCCATTCCCATCCTCATCCTCATCCTCATCCTCATCCTCATCCTCCTCCTCCACCACCTCTACCTCCTTTGCCTACTGTAAGTGCTACTGCTAGTGAATCTTCACTTGGTAGTGTATTACCGCTACCACCGCCAAAACCTCTATCAATGCCATCCATGACCGTGGCAACCACATCAACATACTCGACGATGTCGACGACTCCGACACCAACTTCGACTCCAACTCCGCTGCTTATGCCACCCCTGCCTGCTGTGCCCATCAAAGATGAGCCAATAGATGATACCGATGATGACTATCAAATGAAGTCGATAGATGAATCCATAGATGATATGGTTGATCCCACAATGTTCCTAGAGCGTTCCGAGCTTGAAGGCGATGTGCCATTAATGACATCGGACTATGATTATACAGCCCAGCATGGGGTGACAGCTGCTGTGGCGGCTGCCTCACTTCCGGCTAGCGCTGTTGCCAATGTGGCCGCTGCCGGTGACTCAAAAGTGGCCAGCTGTCGGGCATGTAGTTTACAATTTTCCACCAGAGCCAATGCCCGACGTCATGAGCGTAATCTGCATCCGAATCTGTTTCAATTGTCCACCGATTCGCCGAATAATACACCAGTTACGAAACCAACACCCGCTCTGGCCGCTGCCTTGGAAATTCAAAGGGCCGCTGCTGCTGCAGCCACAGCCGAGGCAAATCGTTCCGGTGGAAATATGTCCACACAAAAGTATCGTCAGGTGGTAATGAATGCCTTTATCAAATGTGAAGCCGGTGGCTATGACTATGACAATCCTGAGCAATATCAATCTCTATTGAGTCGCGATAAAATTGAATTTATCGAACAGAATTCAGAATTTCTTGAACAGTATCAGACAATGACATGTCGATGTTGCAATAAGTTCTTTAGCACCTATAAGAATTTTATGGCCCATGTACGTAAGAAGTATCCATTGTTGCCACGAAATCTCTGCTTCAATTGCCTCAAAATGAATGATTCGAAGGCATTGTTTATTTCGCATCTTAAAAAGCGTAACTGCATCAATTTGTACAGAGTTATGAATGCCTTAAATAGTAAACAAAATGATGGTACAGCACCAGTTGCCTCCTCTCCTGCTATTGTTGTCCCAGCATCAGTATCAGCAACAGGGGCTGCCTCTGGATCGAGTACCACAACAACAGCAACAACTAATTCAGATAGGCCAGAAAAATTGCGTGCCAAGGAGCTATTGGTTAACAAGCTCTATGAATGCAAACTTTGTCCAAAAGGTTTTCGCACCAAACATGAATTCCGCACCCATGTCTATGATAAGCATGCGGATGTTCAACGAAAGGATAACAATTCCATACAGTGCAGCTTCTGTGGGTTGGACTTTGCCGATCCTGTAGACAGGCGGCGTCACTATAACAACATGGATTGCATTGTTCGTTTACGTTGCATGACTTGCGATGCCAAATTGGAGACGCATCAGCGATTCCTCGACCATGTCTATCAGGATCATTTGGGCGGTTTGAGCAGTGATAATGCTTCATCAACGACTGTGAGTGGTGCAACTGTGGATAATTCACATACACCTGGCAAGAAGAGTTTGCTTGGTGCTTTAGGCATCGGATCAGCAGATGAATCCCGGAGTGGTGGTAGTAGTGCCACTGCACAACCGCCGCTAAATACATCCACACCAAAAGCAGTTGGAGGAGGAGCATCATCATCAGCTGCATCAACAACATCTGCCAGTGGTGGCTTATTAGGCGGTGGTGCCAGCCGTGATCGTGATGGTGCACCAAAATCCCAATATTTCTCTCGCATGCCCCAAGTCTGTCCCATTTGTGGCCAGCAATATAACAACTACAACAATGTGCTTCGACACATGGAATCGAAGCATCCAAATAAATTGCCCGAAACGTATAAATGTGTACGATGTGGTTTGGGCTATCCAAGAATCTCTTATCTGCGTGAGCATATGATCAATGTCCATGGCGTTGATAAAAATCGCCATTCGGGCGGATTCGAGTATATTGTTAATGCAGATGCCGTTAAACTGGCCGATGGCAGCACTCCAAATGTCTATACGGGCCGTTATGATTATGTGATGAAGGATCTGATGTCGATAACAAATGGTGGGACCCTCGATGACGATGACGAGGAGACGAGTGGCAGTGTGGCCAAGAAAATACGTTTGGATGATAGCAGTAATAATAGCAGTTTAATGGGCATGGCTGCCACACAGCAAAAGGAGTGTCCAATTTGTAATGCGGTATTCAGCAATAATATTGGACTATCGAATCATATGCGTTCCCATTACACAGCCTCAGCGAATGCCTCTGCATCGGCATCGACATCCGCATCATCCAGCACAAATGCTGCTTTAGCTGCTGCAAATCGTATGACACCCAAATCCCTAACTATAACAGCAGCTCCACCAATCACACCGGAAGTAGCAGTAGTGTCATCAAAATCATCCAAGGATACGGCAGCTATCTCATCGTCATCATCAGCAGGACCCCAAGTTCATGCAATACAATTTCGTCGCAGTTTGGATCAGGCAGCTGATCGTCGATTTCGTCGTATGCGTTGCCGTATCTGCCAGAGACGATTTAGTTCCAAGAAATCGTATCGTTATCACATGCTGACCGATCATCAAGTCCAGAATGTCCAGTTCATAAAATGTAAATTGTGTAATGCTGAATTTGCCTACGAGAAAGGGCTCAAGGTGCATCTGTTTAAGGTGCATGGCAAGGCCATTAAGGATGAGATGATAATCAAGCAATTCGAATGCGAGATTTGTTCTATAGTCTATAGCTCGGAATTGGAATTGCAGCAGCATAAGCGCAGTGTCCATGAGTTGGCTACAGCTACTGCATCGTCATCAACTGCAGCGACAACAACAGGAACAGGATCTTCAGTAGTAACAACATCTGGTGAAACAACCACCGGATCAACATTAGGAATAAGTGGCAACAATGGTTCCAGTTCCATTCCTGCACCCCTTTATTGGTATCAATGCAAATATTGTCCATCCAATTTCAATACAAATAAGAAATTGGCCATTCACATCAATTCCCATGATGAGTTCGATTCCAATGATTATTCTTGCAAGGATTGCGGCAATGTTTATAGTGGAAGAAAAAGTCTCTGGGTGCATCGCTATAAGAAACATCCGCAAGTGCCTGATCCGGCTGAATGTTGCCTTTGCCGCAAAGTATTTTTCGATCGTCAAATGTTGGATAATCATATGCCCACATGCCTAATGGTGTTTAAGCATAAAACTGGTGATGATGATGAGGACGAAGAGGATGATGATCAACTCCAGCAACAGGCGCAACTTCAATTGGATGATACAACCACTGATGAGGCTACTGATGTGGGCAATTCTCCTGCTGTTGTTACTGCTGCTTCATCTTCGTCTACTCATGTCAAGATACGTATACCTGAAGTGGCATGTACCATTTGTGGGGCACGGTTTATCGATCAGGAAATGTTTACCAAGCATATACAGAAGCATGAACAGGAATTGTATGTAGATAATCCATTGGCAGCCATGTTCGATGATGGTCCAGCCGATCCGGGACAATTTCAAGTGGAACGACAGAACGAGAATGGGGAATATGCTTGCGATTTATGTGCAAAGACATTTCCCCAAGTGATTGCACTTAAAGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACACCGAATCGACACAGTTGAACAACAACAACAACAACAATTCGATGTTGCATCTACGCGAATTACATGCAGTGGGTCTGGTGCCCAATCAACAGCAACAACAACTAAACTCCAGCCACAACCAGAGCCAGAGTCAACAGCAGCAACAACAACAGCAGAGCCACAACACATCAGCAACATCAACGACAACGGCAACAACGAGCAAATCATTGAAACGGAAACGTGAATTGAAATGCGATTATTGTGCCTCCACCTTCATCAGTAATAACAATCTGCGTCGTCATATGTATGAGCTGCATAAGCATGAGGTTAGCCATTTGCCCGAACCACCAGTCATTGTGGTGGATGAGCTACTCTCATGTCGACGTTGTAATCTTCATTTTGATACAAAGGAATTGTGGATTGAGCATAAATTGGCTGATGCCAAAGTTGTGCGACCGTTTTGCCCCTTTCAATGGGGATGTGATCTATGTGGCGAGTATTTGTCACGCAAAGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGAGGATGTTATAGTCCCGGTGGCTGAGAAAATAATGATAGCAGCATCCTCGGGTGCGGCGACAACATCGACCACAACACCAACAATAGCAGCAATCGGAACAGAAACAACTAAAATTGGTATATTAAAATCAGAAATAAAACCAGAATCAAATGAAAAGTCATCTATGGGAGCGAATGATGGAGTTGAACAGAAATTACCGATAATACCAGAGGCTACGGAAGATGAAGATGATGATGATGTTGAAGAGGATGTAGATGGTGTCGATACAACAAATTGA
- Protein Sequence
- MCDTAITVNPTATITSTGATVNASGPQIAATIIATPTGNATKKEPQRTPQNCCRLCIAPATECISIINSYAADKEPLTTKIYNCVNIKITSQDCLSQQICHACISYLNSWQSFKNRCLSSQSKQRQWLETTVTVTATTTTTTQPTTTSKTKLLSYLDLNSAENGTGTGTDHQLAEENEAIVVGSSDMRHHHHQQPYRKHQQPRSRRQTQYQYTPRRSRPQGRRAPEHATPYTSQAPTISINPAVHVTTTRKLKSKMYLPLDITVPSPPIHVVGTPLHSHSHPHPHPHPHPHPPPPPPLPPLPTVSATASESSLGSVLPLPPPKPLSMPSMTVATTSTYSTMSTTPTPTSTPTPLLMPPLPAVPIKDEPIDDTDDDYQMKSIDESIDDMVDPTMFLERSELEGDVPLMTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPVTKPTPALAAALEIQRAAAAAATAEANRSGGNMSTQKYRQVVMNAFIKCEAGGYDYDNPEQYQSLLSRDKIEFIEQNSEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVMNALNSKQNDGTAPVASSPAIVVPASVSATGAASGSSTTTTATTNSDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGLSSDNASSTTVSGATVDNSHTPGKKSLLGALGIGSADESRSGGSSATAQPPLNTSTPKAVGGGASSSAASTTSASGGLLGGGASRDRDGAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETSGSVAKKIRLDDSSNNSSLMGMAATQQKECPICNAVFSNNIGLSNHMRSHYTASANASASASTSASSSTNAALAAANRMTPKSLTITAAPPITPEVAVVSSKSSKDTAAISSSSSAGPQVHAIQFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECEICSIVYSSELELQQHKRSVHELATATASSSTAATTTGTGSSVVTTSGETTTGSTLGISGNNGSSSIPAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECCLCRKVFFDRQMLDNHMPTCLMVFKHKTGDDDEDEEDDDQLQQQAQLQLDDTTTDEATDVGNSPAVVTAASSSSTHVKIRIPEVACTICGARFIDQEMFTKHIQKHEQELYVDNPLAAMFDDGPADPGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDTESTQLNNNNNNNSMLHLRELHAVGLVPNQQQQQLNSSHNQSQSQQQQQQQQSHNTSATSTTTATTSKSLKRKRELKCDYCASTFISNNNLRRHMYELHKHEVSHLPEPPVIVVDELLSCRRCNLHFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVAEKIMIAASSGAATTSTTTPTIAAIGTETTKIGILKSEIKPESNEKSSMGANDGVEQKLPIIPEATEDEDDDDVEEDVDGVDTTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -