Dstu006679.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- bab2
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000317.1:1047816-1050035[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-12 8.4e-09 34.9 0.1 1 44 312 355 312 356 0.91 2 2 2.1 4e+03 -2.5 0.9 4 20 453 468 453 468 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGTGGTGGTGGTGGTGGTGGTGGCGGCGGTGGGCCCACACCCACGCCTGTAGCAGCCAATAGTGAGGGGCAAACGTATTGTCTACGCTGGAATAATCATCAGACGAATTTGGTACAAATACTTCATGCACTGCACGAGGTGGGCAGCTATGTGGACTGCACTCTGGTTGTCGATGATGAACAATTTAAGGCCCATCGTGTTGTATTGGCCGCGAATTCACCATATTTCCAGCATATATTGCAGGATGTGCCGCAGGATCAATGTAGCATCATATTGCCAGGTGTTAAGGGATTCGAAATTGCAGCACTTTTACAATATATGTATACGGGTGAGACGACAGTGACGAAAAGCCAGGAGCCGGAAATCCTGCGTACAGCCAAAGAGCTCCAGACGCCATATACGAATTATCCAACCGGATCAAGCCATCCACATATTCCAGCTGGTGAGACTCCATTGACACCCACACATACCACATCACATGCTGCAGCCGGTGAGTCTGGTGGCCAATGGCCACTCTCTCCCTCTGCTGCCGCCGCTGCCATGTTAAATTCCGTCTATGAGAGTGCTGCCGATATGAATCCTCTCAAGCGTAAGAAGCTCTCGGCCATATCCAGCATGTTGCTAAATAGTACACGTGACACTCCCATTCTGCGTAATGTATTGGCCCAGGCCAATCCAGCAGATTCCTCCCAGCAACAGCAACCAAATCCTTTACTCCTGAAGAGTTCTTCGTCATCCTCGTTGGCCGACAAGGCGCCCTCCCATCAAAGCGTCGGCGTCGGAGGTGGAACTGGTAGCCATAGTTTCAATGGCTCAGATTATGGTGGCGATAAGGAACCCCTTTCGCCACATACAGATCGTTCATTCGATGAGGAAACTGGAGGTCCTGGTGGCAAGAAACCAGAGTGGAAACGCTACAAGCAATATACCCGTGCCGATATGATGTGCGCCATTCAGGCGGTTCGTGAGGGGATGAGTGCCTTACAGGCGAGTCGAAAATATGGTCTACCCAGTCGAACTCTATACGATAAGGTGCGAAAGTTGAACATAACCACAGGTCGTGGCACTCATCGTAATCCGAAGCGCAGTCCACCTGGTGTGGAGTCGTCTGCTGCTTTCCCCTATTCCGCTGCTGCTGCAGCTGCTGCTGCCCATAATTATGGTCATGGTCAGGCGGATCTATTGGAGCGTAGTGAACAGGCCAAGGAGCATGGTTCCCATCATTCACATCATGGCATGCCACCAACAATATCCCATTCGGCAGCTGCTCTTCTAGATCATGCATTCCTCCAGCAGGCCCTGGAGAACCGTGGCGGGGATATGGCTGGACGAGAGGCACTACATGCTATGGCATTGGCTGCTGCTGCACATGCTGCTGCCAATCGTATGTCCACAAGTCCGCCAGGTTCCGGTTCAAATGGTCATCCACATGGCGCTCGTTCGCCCAGTCCCAGTCCAAGCCCACGTCATTATGCCGAAGATCTGGAAATGCATGAGGCGAAGCATGAACGGATGATTAAGCGTGAACATGACCAGGATGAACGCGAAGATGCCGATGCCGATGCCGATGATGAAGAGGATCATGATCATGTTGAAGATTTATCATTGGCGCGAAAAGAAAGACCCGAATCGCCATATTCACCGCCACCGCCAAGGGCCTTGTCACCCTCCATGGAGGGTGCCAGTGTCATAATGCACTCCTCGAACTCAACGTCAACCAATGGCAAAGAGCATGAGGATTATCCAACTTCTGCTTCATCGCCGCCACCACCACCACCACCACCACAATTACCAGTGGGTTTGGGTCTCGGCCTGGGCCTTAAGCGTGAACTAATGGGGGGCGATGAAACGCAAGCGCGCACAGACTGA
- Protein Sequence
- MGGGGGGGGGGGGPTPTPVAANSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQTPYTNYPTGSSHPHIPAGETPLTPTHTTSHAAAGESGGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQQQQPNPLLLKSSSSSSLADKAPSHQSVGVGGGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRNPKRSPPGVESSAAFPYSAAAAAAAAHNYGHGQADLLERSEQAKEHGSHHSHHGMPPTISHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSTSPPGSGSNGHPHGARSPSPSPSPRHYAEDLEMHEAKHERMIKREHDQDEREDADADADDEEDHDHVEDLSLARKERPESPYSPPPPRALSPSMEGASVIMHSSNSTSTNGKEHEDYPTSASSPPPPPPPPQLPVGLGLGLGLKRELMGGDETQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501130;
- 90% Identity
- iTF_00591059;
- 80% Identity
- iTF_00600404;