Dstu011867.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- -
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000324.1:1855199-1856517[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-13 2e-10 40.1 0.0 3 39 253 289 251 293 0.93 2 3 0.0075 14 5.4 0.0 27 39 324 336 311 341 0.85 3 3 4.3e-15 8e-12 44.6 0.0 2 41 361 400 360 403 0.93
Sequence Information
- Coding Sequence
- ATGAATAAACTAAAATGGATGGGTCATTCGGCCACCATCATGGGCATTCAGTGTGCACTGCTAAATGACGACAAATCCTGTGAAGTCATCTTGGCAACCCAAGATGGTGCAAGTGAGCGCGCACATCTCTACGTCCTTTGCACATGCAGCAGTTTGATGCGGAATCTGTTAAAGGATTTACCACCAGGACAACAGGCAACCATAATTCTACCAGACATTCGTGGCGACCTTCTGGAAAGTATACTCTCGTTTATATACGTGGGCGAAACAAGCCTGCCCTCGGATTCGTTAACTGAATTTATGGAGGCATTGAGTTTACTTGGTATAAAAGCCCCAATTAAGTTCAAGTGCATCTCCAATCGCAACTTTCAAGTCGAAAATTCTGAATTTGATGAAGAGTTTGATATTGGAGAAGAACCTGAAGATGAGGACGACGACGATGAGGAATATAGTTGGAAAAACAAAACAGAGGAACAGGAAATGCTAATGCATGATGATGAGGAAGTGATAACCGATCCATTGACCAGTTCGGCAGTTTACACCGATGCTGAAATAGATGAAGCTGAAAATGATTATGATGGCACTGACGATGAAGATGATGGGGATGTGTTTGATATAATGGAAATGGAAGTGGATTCCAAAACAAAGTTAAAACCAAAACCTTGTCATGAAGGTACCCCAAAGGTAAAACGTCCACCCAGCAAAAGGCCACGAAAAAACAGTAACCAAACTATCGAGGGTAAAGATGGCATTACAGACGCAATAGAATTGGCTGTCGATGCCGTAATTCGCCTTAAACTTAGTCTACAAAAGGCTGCTGATCGCTATGACATATCGAAAACAGTTTTATGGCGTCGCGTACGCGATTGTCCCGAGTACATAAAAATTAATCGAAAAAATCCCATGCTAGCGGAGGCGCATAAACGTCTTAAAAAGGGCCATTCTCTGAAGAGTATTTGCACTGAATTAAATGTACCTATGTCTACTCTCCACCGTCACAAGATGCGAATGGTTGCCGAGGGGCAGTTGCCTGACTATGGGAACGACAGTCGTCGTGATAGCACACCAAAAGATGAACTGAACGATAAGCTTGCAAAGGCGCTCCACGCTTGCATTCACGATGGCATGACAGTGAATCATTCAGCAATTCTATTTGAGATACCCAAGAGCACTCTTTGGCGCCACTTGCAACGTCAATTGCCTAACAAGGGGAAAAAATCCCAAAAAAAAAGAAAACAAAAGGAGAGTAAATAA
- Protein Sequence
- MNKLKWMGHSATIMGIQCALLNDDKSCEVILATQDGASERAHLYVLCTCSSLMRNLLKDLPPGQQATIILPDIRGDLLESILSFIYVGETSLPSDSLTEFMEALSLLGIKAPIKFKCISNRNFQVENSEFDEEFDIGEEPEDEDDDDEEYSWKNKTEEQEMLMHDDEEVITDPLTSSAVYTDAEIDEAENDYDGTDDEDDGDVFDIMEMEVDSKTKLKPKPCHEGTPKVKRPPSKRPRKNSNQTIEGKDGITDAIELAVDAVIRLKLSLQKAADRYDISKTVLWRRVRDCPEYIKINRKNPMLAEAHKRLKKGHSLKSICTELNVPMSTLHRHKMRMVAEGQLPDYGNDSRRDSTPKDELNDKLAKALHACIHDGMTVNHSAILFEIPKSTLWRHLQRQLPNKGKKSQKKRKQKESK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600428;
- 90% Identity
- iTF_00600428;
- 80% Identity
- iTF_00600428;