Basic Information

Gene Symbol
NCOR1
Assembly
GCA_018904355.1
Location
JAEIFY010000119.1:11244008-11248570[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.5 6.6e+03 -2.9 0.1 12 24 83 96 83 97 0.86
2 2 7.4e-08 6.6e-05 22.7 0.0 4 43 226 265 224 267 0.97

Sequence Information

Coding Sequence
ATGGAGGTGGCGTGGCGCGCTCGAATGCTGGCGCAGAGCATCTATAAGGCGAACCGTAAAACGGCAGCCGAACAACATTCCCTGGTTAGTGCGGTGGTTGGCGTTGCCAACAGCAATGACAGTGGCAGTGGCAGTGGTGATGAGCTGGGAAAATCACGTCCCTGGCTGCCATTGTACAATCAACCGTTGGATGTGGAGGCGCTGAAGCATCTGATTAAGCGACACCAGACTCTGGTGCGCAATCCGCTGGTGCAGCACATACGCAAACTGAAAGCGGAACGCTGGGAGCGCAATCAGGGTCTTGTCGATAAGTATACCAAGGATCAGGCCGATTGGCAGCGACGCTGCGAACGGGCCGAGGCCAGTGCCAAGCGGAAGGCGCGCGAGGCCAAAAATCGTGAGTTCTTCGAGAAGGTGTTCACCGAACTGCGGAAACAGCGCGAGGACAAGGAGCGTTTCAATCGTGTCGGTTCTCGCATCAAATCCGAAGCGGATCTCGAGGAGATTATGGATGGGCTGCAGGAGCAGGCGCTCGAGGATAAAAAGATGCGTTCATATGCAGTCATCCCGCCACTGATGCACGATGCCCGGCAACGCCGTTGCGCCTATCACAATGAGAATGGTCGCATTTGGGATATGGTCGCGCTGCACGAACAGCGCAAAGCCATCAATTTGTGGACAGCCGGCGAGAAGGAGACCTTCAAGGAGAAGTATCTGCAGCATCCGAAAAACTTTGGTGCTATCGCCGCCAGTTTGGATCGCAAATCGCCGCAAGATTGCGTCCGCTACTACTACCTCAGCAAAAAGACGGAGAACTACAAGCAGCTGTTACGCAAATCCCGCCAGCGAACACGCAGCAGTCGCCATCCGGCCAAGGCCCAACAGCAGCAGCCCCAATGCATCATCGATTCGCTGACGACGGGCGTGACGACGCGACTGCAACGCGAACAGCAACAGAAGTCCGGCAATCGGTGCAGTGTCGTTGCAGAGCGCGAGCGGGCCGAGCGTGTTGCGGAACGGGAGCGTGTCGCCGAGCGGGCAGCAGCGGACGCGGCCAAAGCGGCCGAGTGTGCCGCCGAGAAGGCGAGCGCTGTTAGCAAAGCGGCCGAAGCGGCTGCCGGCAGCGAGAAGTCGCAATTGCAACAGCCCGATGGGAGCCTAGTTCCGGACAAAGCAAAGGCAGCGAAGGCGGAGCCACCAGCGGAAACGGAAACGGATCAGCTGGGCAAGCAGAGCAAAGCAAAGGCCTCCAATGCCGATAGCTATAACGCAGCAACGGCAGCAACATCCGCATCGGCAGGTGCCACGACCACAACAGCAGTGCCCGCGGTTAGTGTGGCGATCAACGGGTTTAAGCCCGGCTATCAGAGCGTCGTTATGGCCAATGTTAAGGCGTCAGCGGATGATGCCGCAACGACAACAGCAGTAGCAGCTGCAGGCGCAGCAGCAACGTCGACAAATGCAACTGGCGATAAAATCGTCAAGGTGACGCCAACAACAGTTGGTGGTGCTGCGGCTGGATTTGCTGTGCCCAATGCGGCCAGTCAAGCGGAGCCTGTTAGCAGTGTGGCAACGTTGACAACGGCCACAACAGCTGGCAACTATCTGGGCCAAAAGTTGAAGGCGGCACAGGTGGAGGGACTTGGCGCTGGCAACGAGCTGCACACGGATGTCAGTCAAGTCACATGCGTTGGCAAAACCAGCACCGGATCTGGGCCAGCTTTGGTGCCGGCCGCCTCATCCTCATCGCTGCAGTTTATTGGCTCTGCATCGATTATGTCCACAACAGCAACGGGTACACGGAGCACAATGTCGACAACAGATCGTGCTGGTAATTTGTTGAGCACATCCGAAGTTCTGGCATTGGATGGCAAAGATACCTCAGAGAGCAAGCAAGAGCGACCGCCAAAGTGA
Protein Sequence
MEVAWRARMLAQSIYKANRKTAAEQHSLVSAVVGVANSNDSGSGSGDELGKSRPWLPLYNQPLDVEALKHLIKRHQTLVRNPLVQHIRKLKAERWERNQGLVDKYTKDQADWQRRCERAEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDARQRRCAYHNENGRIWDMVALHEQRKAINLWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRHPAKAQQQQPQCIIDSLTTGVTTRLQREQQQKSGNRCSVVAERERAERVAERERVAERAAADAAKAAECAAEKASAVSKAAEAAAGSEKSQLQQPDGSLVPDKAKAAKAEPPAETETDQLGKQSKAKASNADSYNAATAATSASAGATTTTAVPAVSVAINGFKPGYQSVVMANVKASADDAATTTAVAAAGAAATSTNATGDKIVKVTPTTVGGAAAGFAVPNAASQAEPVSSVATLTTATTAGNYLGQKLKAAQVEGLGAGNELHTDVSQVTCVGKTSTGSGPALVPAASSSSLQFIGSASIMSTTATGTRSTMSTTDRAGNLLSTSEVLALDGKDTSESKQERPPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00514118;
90% Identity
-
80% Identity
-