Dspr000127.1
Basic Information
- Insect
- Drosophila sproati
- Gene Symbol
- retn
- Assembly
- GCA_018904355.1
- Location
- JAEIFY010000050.1:9529613-9557321[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5 1.1e+04 -3.3 0.0 14 64 105 126 97 136 0.56 2 2 2.9e-26 6.2e-23 80.8 0.0 2 89 272 357 271 357 0.96
Sequence Information
- Coding Sequence
- ATGCAACTCCGAGTGCATCCGACTATGGATTGTAGCGGCCGTTCAAATAATAATATTGAGCGCGATTCCGATTTGGGTGACGATTTGTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGAGGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGCCATCATCATCAGCTGCCGCCGAATCATCCGCTCAACGCCCTGGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCGGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAGTACGGCCTTTCCGCTGCCGCACAATTCGGTGGCAGCGGCTGCGGCAGCTGCATCCTTTGGCCATGCCACAAATGTGAATGCCAATCCGGTGCCGCCAGCCAGCAATGGCGCCAGCTACAATGGTGGGCCCAGCGGTGGACATGGAACAGGAGCACCTGCTAGCGTTGGCAACAGTGGTGGCACAGGACCAGGAGCGCGCCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACAACAATTTCGCGACCACCGTTGCCAGGGGGCATGCAACAGATGTCGCCGTTGGCGCTGGTCACACACGCGGCGGCTGCGAACAATCAGCAGGCGCAGGCAGCGGCCGCAGCAGCAGCAGCACATCGACGGCTGATGGGCGGACCGGCCTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGACCCCGATCTGAGCACACGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCACTTCAGCCGCCGCCTGCGAAACGTGTGGGCAGTGGCCTAATGCCGCCCGGTTTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGGTGAGCCAGAGGATGAGTATGGCAATGGGGAGCATAACACCACCGGCAACTCATCGTCGCTGCAAGATGAAAGTGAACCACAGCAGCTGAATGGACACCACCTGCACCATCATCATCATGATCGTAACGATCTGCATCATGATCTGCATCATGAGCATCATCATCATCATCAGAATCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCACATCGACAACGACAACAACAACAACATCATCATCCACATCCAAATCGCATCGTCACAGCTCGCCGGTCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCAAATGGCGAGCAGCAGTTGATTGTCAATCTCGAACTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCAACCAAGCAGCAGCAGTTGCAGCAGCAGCCGCAGCAGCCAAGCCAGAGGCAGGAGCTGGCACTGAGCGGCAGCAGGCAGAGACGCCAATTGCTGCTGCTGCTGCTGCTGCTGAGGAGCCAGCAGTGAGGAGCAGCAGCAGCAGCAGCACTGACGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAACCGATGAGGAAACAATGCAGGAACAACAACAACAACAGCAGCAACAACAACTCACAGACGAGATTGTGAATGGTGCAGGAATTGGGGGGGTTGCTATTGGGGTCAGCGGTGCAGTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MQLRVHPTMDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVEGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHATNVNANPVPPASNGASYNGGPSGGHGTGAPASVGNSGGTGPGARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMDPDLSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETALQPPPAKRVGSGLMPPGFPANFYLNPHNMAAGEPEDEYGNGEHNTTGNSSSLQDESEPQQLNGHHLHHHHHDRNDLHHDLHHEHHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSSTSKSHRHSSPVLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAANQAAAVAAAAAAAKPEAGAGTERQQAETPIAAAAAAAEEPAVRSSSSSSTDDELKHENSQELGQNEATDEETMQEQQQQQQQQQLTDEIVNGAGIGGVAIGVSGAVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -