Basic Information

Gene Symbol
srp
Assembly
GCA_035047465.1
Location
JAWNPQ010000029.1:3847813-3863002[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-18 8.2e-15 54.0 2.0 1 35 955 988 955 989 0.97

Sequence Information

Coding Sequence
ATGACCAAGACGAGCAAAGCTAAGGATAAGGACAAGAGCAGTGCAATGCCGCGTGCGCCAAACAATTTGCTAACGAGTGCGGCCAAAATGAAGATCACCAAAGCGCTGGCCAATGCCAAGAAGTGCCCGACTGGGCCAAAGAGCGCCCTAGGCGACAGGGCAACAGGATCAAAtgcagggacagggacagtTGTAGGGGCAGCAACGGCCACCGCATTCAGTCAACCGCAACAGGCGGTGAAAGAGACGGCAACAGCGGCGAAGGAGAACggcgaaaacaacaacgagcagcaacaagcgaaagcagcgacgtcagcgtcgccgtcgccgtcgccgtcgccgttgtcgCCGCTTGCCACAGCGAATTTATCGTCGACATTCGAGTCGAAGGCTCAGACATCAGTTGCCAGCGAAACGGCGAAGCAAACGGTTagcagcgcagcaacaacaccacgagcaacgacagcagcagcagcaacaacaattgcaaattccACGATCTTTGCTTATGATGACAACAACGTAAGGCAGCAGCCCGGCAGTTGTGACGTCACGAACAAATTACTTCCAGACGAGACGGCTAATAACAGTCTAGATAAAGTCGAGCCCAAAACAGAAAGCGAAACGAAGCTagagacagcagcagcagcagcagcagcagcggcggcggcaacaacaggcgataaatattacaaaatcgTTGATAAGTGCAAAAGTGAGATAAGTGatgaaaacacaacaacaacagcaacaattttgcCGGTTGTAGTGATAAATAGTAATCAGCAAAGCGACGCCAGTGAAAGTGTtgacaacaaaatcaaaaCCAACTATgcgcatcagcaacagcaacagcagcagcagcagcagcatcaagcagagcagcagcaaatctatgagcagcaacaatttctgcaacagcagctgctaagccaacagcaacagcaacaacaggagcaacatcaacagcagcagcaacacgctAGCTGGTTGGCTTACAACAATTGCCCCTACGATTTAACCAGcaacagcgcagcagcagcagcggcagcagcagcagcagcagcggcggcagcagcagctacccaACAGGATAAAAGCGAGTTTTATGCCTTGGCTGCCTCACAGCAATTGCTGGCGCATTTTCCCTATCATCAGCCCCATTTGTAcgagcagcaacatcagcaacaacagcagcagcagcacagcgccaacagcagcaacagcagcagcagcacggaTCCCATAATGCGCAACAATTTTGCGCTTTACGGCGTttatggcggcggcggtggcggggGAGGCGGCATTGGCAACACTGTCACGCCCAGTCcgcacgagcagcagcagctacagcaacatgttgccgctgtggcagcagcagcggccgctgccAATTCGGTAATTGCGCACACGACGCACACAACGACGCCCAACATCGACGAGGTCATCCAGGATACGCTGAAAGACGAGTGCTTCGACGAGAATCATAGCTCCAGCTATCACCTGTTGACCTCCGTCTCCGACCTGCATGTGCTGAAGGAGGCCAATGCGACCATTTATTCCTTGACGCAGGatcagctgctgcaacagcaacagcagcagcagcagcatctgcaccatcagcatcagcagcatctgcagcagcatctgcagcagcatcagcatcttCACCAGCAGCATCACAACAACTCGGCCAGCTCGGTGGGCGGCGACTCGCCCTCCCCCTCGCACACGCTCGCCGCGCACGCCAGCGAGGTGGCAACCCTGCAGAGCTTCACCCAATTGACGAGCGCGCCGCCCAGCAGCGGACTGCACCGCGACAGCTACGGCAGCCTCTCGCCGGAGCAGCACGTCAGCTACTTTGGCGCACAGCTCAGCCCAGTGCTGCAGGGCAGctcTGTCTATGCAAATCCTTTGCTCGCCTCGGCTGCCAATGGCATTCAGTATGGGATGCAAACTGTTGGCTcgcccacccacacacacgcccagctgcagcagcaacatcaccaacaccagcaacagcagcagcagcaacagcagcaacatcagcagcagcagcagcaacagcatcatcagcatcacAACTCGACCAGCAGCAGTCCTGGCCCAGTGGGTCTGCACCACACGAGCGGCTCCGCCAGCGGTGTAGCGGGCGGACACAGCTCCCTGCTGGACGACGGCTATGGCTCGCCCAAGAGCAGCCACAgtggcaacggcggcggcgggggcacCTTGCCCGGCTTCCAGCGCATCGCGCCGACCAGCGCCGGTGGTGCTGGCTATGGCAACGGCGTGGCCAATGGCACTGCCAGTGGCCCCGAACGGGCTAGCTACGCATCGCTGGTCAATTACCGTACACACGGCGACGCCTGGAGTAGTCATTACGAGCAAATTAGCTACGCGCCCAGTGCCACTGGCCAGGGGCAGTTGGGtggcagcgccggcggcgcagCGGCGACCAATGTGATACGCAACGGACGCACAGTgaccgctgcagctgcagcggcagcagctgctgtggaTGCCGTTGATCCTGCGCGCTTTCTGACCAATGCCGCTCATCTGTCCGCGTCGGCATCGTTAACAGCAACATTACTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTACCCATTTAACGTGACCGCCGGTAGCCGCAGTAAGGCCTCCACAAATGCCAACAGCGCTGCCGGTTCCGGCGCAGGCTCAACGTCAGCGACGACGTCGTCAGTGACTTCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCCCGACGTGCTGGCATGTCCTGCTCCAACTGCCAGACGAGCTACACATCGCTGTGGCGCCGCAATCCTGGCGGCGAGCCCGTCTGCAACGCCTGCGGGCTCTACTTTAAGCTCCACAACGTGGTGCGTCCGCTGACCATGAAGAAGGACACGATTCAGAAACGCAAACGCAAGCCGAAGGGCACCAAGAGCGAAAAGTCCAAGAAGATGAGAACCTCGCAGGCGGCTGCAGTGGTGGCCAACAGTGCCAACGCCTGCCACAATGTGAGCATGCAGCTGGATGGGCATGGCCAGTCGATGGACGTCAATGATGAGATGAAACCACTCGCATATATGTCATACgcatcgcagcagcagcttcagcagcaacaactaaacaCTGAGCAACATTCATCAGCGGCCAGCTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCCAATGCAGCagctcaacagcagcagcagcagcagcagcagcagcaacaacagcagcagcagcagcagcagcagcagctatgTGCTGGCCTGGACATGTCGCCCACATCCTCCTATCAAATGTCGCCCATtaacatgcagcagcagcagcagcaatcatGCAGCATGCAGCATTCACCCAGCACGCCCACGTCAGTCATGTCACATTCCATTTACTCAACACCATCGCCCACGCAGCttcataacaacaacaataacaacacattGTTTAATcataacaacaatagcaatgagaataacaaacaaattatacaGAAATACCTGCAAGCTCAACAAttgagcaacagcagcagcgatcaACACTTATtggcgcagcagcaacttATGCACCTGATGCCGAACTCCAttacggcagcagcagcagctgcagcagcagcggcggcggcggcggcagcggcggcaatgAACACGGCGATCAAATCGGAGGCATCCACCAAccccagcaccagcaccaccagcagcagcagcagcaacagcaacagcaacagcaacagcaacaacagcagcaaacaattgtctgccacaacaacaacagcaacaacaccgaCCACGGCATCGAACACACTATCCTCGCTGAgcctcaacagcagcaacattatcAGCCTGCAAAATCCCTATCAGCAGCAGGGGCTTGGTCAGACGGAGATGCCCTTGTGTAAGTCGGCGCTGAGCGGACGCACCTCGTCGCCCTACTATATAAATCATTTGGCCGAGGAGGAGCAGCCAGCCATTATAAAGCTGGAGCaattggagcagcagcagcagcagcagcaacaacatcaacaccatcaacaccaacagcagcaccagcaacacgACGAGCTGTTGCTCAATCGGTCAGCGTCCATCGATGAGCACTACGAACTGGCCGCCTATcatcgccagcagcaacagcagcaacagcagcagcagcagcagcagcacgctctgcaacaacaagttgcacTTAGTCAACACGAGCAACATATTGCCAGCTATGCGTTACACGCAGccgcacagcagcaactgcacgAATTTGGCCGCAAGTATGGCGTTGAGCGAGAGACAATTGTTAAAATGGAATAA
Protein Sequence
MTKTSKAKDKDKSSAMPRAPNNLLTSAAKMKITKALANAKKCPTGPKSALGDRATGSNAGTGTVVGAATATAFSQPQQAVKETATAAKENGENNNEQQQAKAATSASPSPSPSPLSPLATANLSSTFESKAQTSVASETAKQTVSSAATTPRATTAAAATTIANSTIFAYDDNNVRQQPGSCDVTNKLLPDETANNSLDKVEPKTESETKLETAAAAAAAAAAATTGDKYYKIVDKCKSEISDENTTTTATILPVVVINSNQQSDASESVDNKIKTNYAHQQQQQQQQQQHQAEQQQIYEQQQFLQQQLLSQQQQQQQEQHQQQQQHASWLAYNNCPYDLTSNSAAAAAAAAAAAAAAAAATQQDKSEFYALAASQQLLAHFPYHQPHLYEQQHQQQQQQQHSANSSNSSSSTDPIMRNNFALYGVYGGGGGGGGGIGNTVTPSPHEQQQLQQHVAAVAAAAAAANSVIAHTTHTTTPNIDEVIQDTLKDECFDENHSSSYHLLTSVSDLHVLKEANATIYSLTQDQLLQQQQQQQQHLHHQHQQHLQQHLQQHQHLHQQHHNNSASSVGGDSPSPSHTLAAHASEVATLQSFTQLTSAPPSSGLHRDSYGSLSPEQHVSYFGAQLSPVLQGSSVYANPLLASAANGIQYGMQTVGSPTHTHAQLQQQHHQHQQQQQQQQQQHQQQQQQQHHQHHNSTSSSPGPVGLHHTSGSASGVAGGHSSLLDDGYGSPKSSHSGNGGGGGTLPGFQRIAPTSAGGAGYGNGVANGTASGPERASYASLVNYRTHGDAWSSHYEQISYAPSATGQGQLGGSAGGAAATNVIRNGRTVTAAAAAAAAAVDAVDPARFLTNAAHLSASASLTATLLDADFFTEGRECVNCVAAESGGDFYKTYPFNVTAGSRSKASTNANSAAGSGAGSTSATTSSVTSTALDEHVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRTSQAAAVVANSANACHNVSMQLDGHGQSMDVNDEMKPLAYMSYASQQQLQQQQLNTEQHSSAASSPQSMASSSLSPNAAAQQQQQQQQQQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQQSCSMQHSPSTPTSVMSHSIYSTPSPTQLHNNNNNNTLFNHNNNSNENNKQIIQKYLQAQQLSNSSSDQHLLAQQQLMHLMPNSITAAAAAAAAAAAAAAAAAMNTAIKSEASTNPSTSTTSSSSSNSNSNSNSNNSSKQLSATTTTATTPTTASNTLSSLSLNSSNIISLQNPYQQQGLGQTEMPLCKSALSGRTSSPYYINHLAEEEQPAIIKLEQLEQQQQQQQQHQHHQHQQQHQQHDELLLNRSASIDEHYELAAYHRQQQQQQQQQQQQQHALQQQVALSQHEQHIASYALHAAAQQQLHEFGRKYGVERETIVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00496247;
90% Identity
-
80% Identity
-