Basic Information

Insect: Drosophila sordidula
Gene Symbol: L
Assembly: GCA_035047465.1
Location: JAWNPQ010000186.1:4796946-4806088[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1e-05 0.00066 19.9 2.9 1 23 163 185 163 185 0.98

2 17 0.35 23 5.6 6.2 1 23 191 213 191 213 0.97

3 17 1.7e-07 1.1e-05 25.5 3.2 1 23 219 241 219 241 0.99

4 17 1.2e-05 0.0008 19.6 0.4 1 23 247 269 247 269 0.99

5 17 0.033 2.1 8.9 0.1 2 23 351 375 350 375 0.91

6 17 0.0022 0.14 12.6 0.2 2 23 391 413 390 413 0.95

7 17 0.28 18 6.0 0.4 1 23 484 506 484 506 0.95

8 17 0.021 1.4 9.5 0.1 2 23 514 535 513 535 0.91

9 17 0.00065 0.042 14.2 0.1 1 23 543 567 543 567 0.94

10 17 4.8 3.1e+02 2.1 1.0 2 23 603 625 602 625 0.94

11 17 0.0025 0.16 12.4 1.1 1 23 680 703 680 703 0.97

12 17 0.0064 0.42 11.1 1.6 2 23 870 892 869 892 0.96

13 17 0.11 7.4 7.2 0.1 1 23 898 920 898 920 0.92

14 17 0.55 36 5.0 0.4 2 23 928 949 927 949 0.93

15 17 2.5 1.6e+02 2.9 1.4 1 23 1049 1071 1049 1071 0.93

16 17 0.071 4.6 7.8 0.0 1 23 1081 1103 1081 1103 0.96

17 17 0.028 1.8 9.1 2.0 1 23 1108 1130 1108 1130 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1e-05	0.00066	19.9	2.9	1	23	163	185	163	185	0.98
2	17	0.35	23	5.6	6.2	1	23	191	213	191	213	0.97
3	17	1.7e-07	1.1e-05	25.5	3.2	1	23	219	241	219	241	0.99
4	17	1.2e-05	0.0008	19.6	0.4	1	23	247	269	247	269	0.99
5	17	0.033	2.1	8.9	0.1	2	23	351	375	350	375	0.91
6	17	0.0022	0.14	12.6	0.2	2	23	391	413	390	413	0.95
7	17	0.28	18	6.0	0.4	1	23	484	506	484	506	0.95
8	17	0.021	1.4	9.5	0.1	2	23	514	535	513	535	0.91
9	17	0.00065	0.042	14.2	0.1	1	23	543	567	543	567	0.94
10	17	4.8	3.1e+02	2.1	1.0	2	23	603	625	602	625	0.94
11	17	0.0025	0.16	12.4	1.1	1	23	680	703	680	703	0.97
12	17	0.0064	0.42	11.1	1.6	2	23	870	892	869	892	0.96
13	17	0.11	7.4	7.2	0.1	1	23	898	920	898	920	0.92
14	17	0.55	36	5.0	0.4	2	23	928	949	927	949	0.93
15	17	2.5	1.6e+02	2.9	1.4	1	23	1049	1071	1049	1071	0.93
16	17	0.071	4.6	7.8	0.0	1	23	1081	1103	1081	1103	0.96
17	17	0.028	1.8	9.1	2.0	1	23	1108	1130	1108	1130	0.97

Sequence Information

Coding Sequence: ATGATGGCTTTAAAGATGTTGTATCGCGGCCCCAGTTCGCGTTTGgagaatttaattgaaaagatTCAGGCCACCAAGGAGATTACGAATAACGATATGTACAGCACGCACACCTCCTCCAGCTACTCGCCGAGCATCTCCGATGGCACTTTGACGCCCAATTCGATGCCGCAGCTGGCGGCTCAGACCGAGGACGGCCCGGCGGCGACGAAGGCGAATGGGGAGGCGGCGTCCGGGccggaggagcagcagctgctggagcccGTCAAGCCGAAGCGGCCGGCACATTTGcaccatcatcaccatcatcattatcatcatcagcagGCGCTGAAAATTGCCAACAAGCTGCGCAAAATCAATAAGGACGCGAAACTGGTAGCTGGCACAGGATCGGGCAGCGCAGGACAACCCGGCCACAATGCGGCGGGAGCCAAGTTTGATAAGTTGACAGGCGAGGGCATTAAAAGTCGCGGCGACGGCTCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGTCTCGGCTACTTGAAGCATCACGTGCAGAGTCACGCCGAACATTTGCCTTTCAAGTGCGAATACTGCGCCAAGCTGTTCAAGCACAAACGCTCCCGAGATCGCCACAAGAAGCTCCACACGAACGAGAGGAACTACAAGTGTCCGCATTGCGAGGCGGCTTTCTCCAGAAGCGACCACCTGAAGATCCACATGAAGACGCACGACATCCAGAAGCCCTTCCAGTGCAGCATGTGCAATCGCGGCTACAACACGGCCGCCGCGCTCACCTCGCACATGCAGAAGCACAAGAAGAACGCGGCCATCCTGGCCGCCGGCGGCAATCCCAATGCGCTCAACTACAGTCCCCGCTCGACGGGCTCGGCCTCGAtctccagcagcggcagcctgCACAAGCGCCGCTATGCGCTGGCCCTGCCCACCGACAGCAGTCCGAGCCGGCTCGAGTTTCCCAAGCGCGCCCGGGCTCAGCTGGCGGCGAacacgccgacgtcgacgtcgacgccgacgccgacgccgacgccgctgctgcgctgcagctACTGTCCGAAGGCGACGGAATTCAGCAGCCTCGAGCAGCTGAACGCCCATCTCCAGGGCGCCcacgagcagcagccggcgggcGAGGGGGCGGAGAACGGGTTCCAGCTGAGCTGCGAGTACTGCACGATGAGGTTCGGGAATATCGCCGCACTCTTCCAGCACATGCGCGCCACGCACCTGGACCGGCTGAGCAGTCCGAACTCCTACTACGAGCACTTCAATCGCCTGGCCCTCGAGCCGGCCAAGATCAAGCCGGACGCGGCCAGTCCGCAGGCGCCGGAGGCGGACGAGCATGCGGcgaagctggagcagcaggagctgccgACGGATTTGAGCAGCAACAAGCGGCAGCCAGTGGCCGCCGCCAGCGCAGCGCCACCTGGCGTCTTTCTGTGCAACCAGTGCAGCGCCGGCCTGCCGGACTTCGAGAGCTTCCGCAACCACCTGAAATCGCACATAGCCGAGGGCATGCAGCTGAGCTGCCCGCACTGCGGCCTCAATCTGCCCGAGCAGAGCGAGTACGAGCGGCACGTGGTCGCCCACTTTCTGATCAGCAGCTCCGAGTTCaactgcagcgccagctgcggcaAGTCGTACGCGAAggccgaggagctgcagcagcacctgcTCAGCGAGCacgtccagcagctgctgaagTGCGTGCTCTGCTCGGAGCTGTGCGAGAACCGGATGTCCATGCAGCTGCACCTGGCCTGCGCCCACAGCCAGGAGACGAagctgctgcgctgcagcgcctgccTGGAGCTCTTTCGCTCCGACGGCGAGTTCCACGTGCACGTGAAGACCCGCCACCAGCTGGGCGGACAGCAGCTgggcggccagcagcagcagcagcagcagctggtgggCGGCATCGCCGCTCCTCCGGCCAATCCGCTACAGTGCATGTTCTGCCGCGTCGTCTGCGCCTCGGAGCTGGAGATGCACTTCCATTTGGCGGCGCACGCGCGCCAATTTCGCTGTCCCAGCTGCCCGGAGACCTTCCACGTCGAGTTCCTGCTCGACCGGCATATGCAGAGCCAGCACGGCGGCGGAGCGAAGGCCGCCAAGGAGCCCGGCGCCAGCATGGGCAGTCTCTATGTGAatgcgctgctgccgccgctggcagcggccgctgccgccgccgcggcggccaccaacaacaacagcagcctgCACATCGACTACAACGTCGCGTTCAAGGGCTTGTTCGGGGGCggcgcggccacgcccaccggcgCACAGGCCAAGTTCTACAGTCCGCTGCAGGTGGACACAAAAACGGCGCCGCAGACGCCGCACCCGGCGCTGATGTACGGCCTCAGCCAGCGCTATCTGATGGAGATGTACGCGGCCAAGGCGAGCTCGCCGGCGACGAGCGTGCCGGAGTTGCCGGCGCAAGCGGCGCCCGCCGGCTCCACGTCCGCTTCCTCCACGGCGACCAACTACAGCTGCGGGATGTGCGAGCGCCAGGATTTGCGCAGCGAGGCGGAGCTCCACTCGCACCGGAAGCTCGCCCACAATCTGAAGACGGGCGTCAGTTTGCGGTGCGCCTACTGCTCCGGCAATTACAAGTCGCGggcggagctggagcagcacatGAAGAGCTGCCACAACTCGAGCGGCAAGCACAAGTGTCTCATTTGCGACGAGATCTTCCCCTCGCCGGCCATTCTCGCCGAGCACAAGCTGCAGCACTCGAAGGTCGGCCAGTCCGGCAAGTGCGCCCACtgcggccagcagctggagcacgTGGCCGCCTTCCGGGCGCACCTCGGCGAGCACGGCGGCGATGGCAACCTGCCCATGGCCTGCATCTGCTGTCGCCAGACGCTCCACTCCGAGTTCGAGCTGAGCCTGCACGCCAAGTTCCACACGAAGTCGTCGCCGGGCACCGGCAGCCTCCAGGAGCCGGTCTGCGCCCTCTGCCTGGAGCCGCTGCCCGGCGCCGGCGAGACCGCCAAGCTCTGCGACAGATGCTGTCGCAAGCACAATCTGAACGGCAAGCGGCACAAGGagccagcgccggcgccggcgtcggcgtcggcgtcggccaACGCTGCCCCGGCCGCCTATCTGGAGCACCGCTGCAATCTCtgcaagctgctgctgccgcacgCCCAGAAGCTGCAGGAGCACCTCGTCGAGCACACGTTCGCCGGCACCGAGCAGCGCGGCTTCAATTGCTACATCTGCTCGGCGGTGTTCACTGCGCCCGGCGGCCTGCTCGGCCACATGGCCGAGCACGGCGCCCGGCCGTACGACTGCAATCTGTGCACGGACAAGTTCTATTTCCGGGCGGAACTGGAGCACCATCAGCGCGCCCACGAGCTGCGACCGGCCGCCAAGCTGGCGCCCAAGCAGGAGACGCTCAGCTCGGCGGCCAGTTCGCCCAGTCCGCTGCCGGCGGTCAAGCAGGAGCTCTACGAATCGGAACCGGCGACATCGCCCGGCGCCGAGCTGCCCGCTCCGGACGAGGAGGAGTACATCGAGGTCGAGCAGGTGCCGCAGGAGACACAGCGCGCCGGCGAGCTCCACACCGCGGAacgctccagcagcagcgcctag
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTLTPNSMPQLAAQTEDGPAATKANGEAASGPEEQQLLEPVKPKRPAHLHHHHHHHYHHQQALKIANKLRKINKDAKLVAGTGSGSAGQPGHNAAGAKFDKLTGEGIKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSSGSLHKRRYALALPTDSSPSRLEFPKRARAQLAANTPTSTSTPTPTPTPLLRCSYCPKATEFSSLEQLNAHLQGAHEQQPAGEGAENGFQLSCEYCTMRFGNIAALFQHMRATHLDRLSSPNSYYEHFNRLALEPAKIKPDAASPQAPEADEHAAKLEQQELPTDLSSNKRQPVAAASAAPPGVFLCNQCSAGLPDFESFRNHLKSHIAEGMQLSCPHCGLNLPEQSEYERHVVAHFLISSSEFNCSASCGKSYAKAEELQQHLLSEHVQQLLKCVLCSELCENRMSMQLHLACAHSQETKLLRCSACLELFRSDGEFHVHVKTRHQLGGQQLGGQQQQQQQLVGGIAAPPANPLQCMFCRVVCASELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGGAKAAKEPGASMGSLYVNALLPPLAAAAAAAAAATNNNSSLHIDYNVAFKGLFGGGAATPTGAQAKFYSPLQVDTKTAPQTPHPALMYGLSQRYLMEMYAAKASSPATSVPELPAQAAPAGSTSASSTATNYSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCSGNYKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGQQLEHVAAFRAHLGEHGGDGNLPMACICCRQTLHSEFELSLHAKFHTKSSPGTGSLQEPVCALCLEPLPGAGETAKLCDRCCRKHNLNGKRHKEPAPAPASASASANAAPAAYLEHRCNLCKLLLPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPGGLLGHMAEHGARPYDCNLCTDKFYFRAELEHHQRAHELRPAAKLAPKQETLSSAASSPSPLPAVKQELYESEPATSPGAELPAPDEEEYIEVEQVPQETQRAGELHTAERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00538445;
90% Identity: -
80% Identity: -