Dsor008430.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila sordidapex
Gene Symbol
-
Assembly
GCA_035043295.1
Location
JAWNNA010000904.1:781640-796802[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 7.5 4.7e+02 1.6 0.5 1 23 50 73 50 73 0.90
2 8 0.027 1.7 9.3 0.8 1 23 719 741 719 741 0.95
3 8 2e-05 0.0012 19.2 1.1 1 23 747 769 747 769 0.98
4 8 3.3e-06 0.00021 21.6 0.2 1 23 775 797 775 797 0.98
5 8 1.8e-06 0.00012 22.4 1.2 1 23 803 825 803 825 0.98
6 8 0.00054 0.034 14.6 1.8 1 23 831 853 831 853 0.97
7 8 5.8e-06 0.00037 20.8 2.4 3 23 861 881 859 881 0.94
8 8 8.9e-06 0.00056 20.3 1.0 1 23 887 910 887 910 0.98

Sequence Information

Coding Sequence
ATGGCCGCGGAAATAGCAAACTCAGTATTATCGCTGCAGCCGGTggcaattgaaactgaaactccTCTTCACTGGCAGCTCGAGGACTATGCATATTTTCACAAGTGCGGTGAGATTACAACCTCCCCCGATGTCCAATGCTTTGGGTTCAATTGTGCATTCTGTCCGGCAATTTGTCTGCAACTGTCCGTCTTCATTGACCACATACGGACGCAGCACATGCAGGATATGCGAAGGCGCTATGAAAATGCCGCCGCTGCTTCTGCCAGCGACGAGAAAATCgagcaaacaacacaaaccGATTTAAATCTAATGATAATGAATATGGACACGAGCACaacgggagcagcagcaacaccccCTTTGACCACAACAAATAAACGCTTGAAAAAATCCACTTGCAATTGGAATGAGAATGtaaatgagaatgagaatacAACACCTATTTGGGACATGGAAATGGACATGGCTCTGGATTTGGTTAACATTGTGCAGAccacaagcaacaactacaacagcaacacgggaatgacagcaacagcagcatcagcagcagcgagtcCAGCTGAAATTGACTACGTTTATGTTATGCAAAATCCATTGCCACCCTCGCCGCCACCGTCGACGGATGAGCAGCGCAGTCCGCGACTACTGCACTCGATGGatgcatttgaattgctgCATGTTGACTCAACGATTgtctctccacacacacatccacacacccacccatacaaacacccacacacatacgcagcgACACCCTTGGACTCGGTGGGACTACTCACCACACCGCACCGCTATGAGACGCGGCGCGTGGCAATGCAGCGCAAGCTTCGCGACGCGGAAAAGCAAAGTGCAACAACTGCTGATGAAGAAGAACaaacgcagcaacagcaaccagaacaacaacaacaacaacaacaattgcaactccaattacaacagcaactggaggAGGAGAATGTGCTGGAACTAACACCGCCAGCGACGCCGCCAACGCCGCTGCCCCCCACCTCGCCAACCAGCAGCGTTGCGAGCAGCGTCGACATGAAGTTGCGCACGCGTCGCGAACTGGAGCGGAATCGAGAGTTTGTTTGCTCCCTACTGGTGGCCTACGAGCGCAACGAGAAACTCTGGAATCCCAAACATCCCGACTACAAATACAATGCCAAGCGGAGCGTCTACGGTGAATTGGCCGCACCACTTCAGGCCGTCTTCCAGATGCCCATAACTGGTCCCGAAATCTTTGCGGTGCTCAAGGAGCTACGTGGTCGCTATCGTCGCGAGCTCAGCAAACTGAACTCGCTGGGTGGCAAGTACAAGTCGCGACTCTGGTACTTTGAGAAAATGCACTTCTTGCGTGGCGTCATCGAGCACAAGCGGGCCGAACGGGAGGCAAAGAGCGAATCCGCAGAGAGTGAGAAGTCGAGTGATAATGAATCGACGACTAAATCGGCTCAATATCGTGAGGTGCTCAGCTGCATCATTGACTGTTTCCGGAGGCAAGAGAGTTTGTGGAATCCGCAACATTTTGACTACAACAATTGCTCAAAGAAGGAGCTGTATCGGGAGATCTCGGTGGAGCTGCGCGAGGAGCTCAACTATGAGTTGAGCGGCGAGGAGTGTTTCAAGGAGATACAAAAGTTGAGGACTCGTTATCGCAAGGAACTGCGCATGGTGATCAAGCACAAGGGTCTCTATCTGCCAAAGCTTTGGTGTTACGATGAGCTGGAGTTTCTCCACAAGATACTGCAGGATCAGATCTTCAACAAGATAAGCAAGAAAAAGGGCGTCGTGGAAACCATTCAAAGGACAAAGTTCATCAATGCCAGCTGCATTAGCTTTGACACCCCCGACGATCAGCTGCAGTTTGTGGAGATCTATCGCAACTATCCAGCTTTGTGGGATGTGGATCATCCCGATTTCCGCTCAAATGCCTATCGCAGTCAGGCTTTGGGTCAAATGCTCGAGGAGCTCAACACCACATTTCAATGCTCATATACTCCTGCGCAGCTGGAGAAGACTCTGTTCGAGTTGCGCAAGGATTACTCGGCCCAGAAGCGTAAAATTCTCACCAATGCCTCCGGCTCGAGCAGCATTCCGTTGCTGCACGCTAAATTGGGTCAGTTTCTCGAACCGAATCTCGGCCCCTTTCGCTGTGATGTGTGCGGGGAGCTGATCAAGACCTGTGATCAGTTCAAGGTGCATCGTGCGGCTCACGATGGTACCCAGCCATTTATATGCACCCTGTGTGGCAAGGGATTCCAAATGCCGTGCAATCTAACGGTGCATattcgtcgtcatcgtcgggACTTTCCCTATGCATGCGAACAGTGCGACAAGAGATTCGCTACCTCCACCGAGGTGGCCATACATATGCGCACCCACACCGGGGAGCGTCCCTATATCTGTGATCTGTGCGGCAAGTCCTTCAAGACGTGGTCCTTCTTCGATATTCATCGGCGCACCCATCTCAATCAGTCCACGTTTCATTGCCCCATCTGCGATAAGGGTTTCTACGAGAAGAACCGCTTCACCGATCACATGAATGCCCATTTGAATATACGCAAACATTTGTGCACCGTCTGCGGCAAGACCTTTACCACTTATGGCAACCTCAAGAAGCACACGGAACTCCATTTGGCGGTTAAGAAGTACAAGTGTGCCACTTGTGGCAAGCGTTTTGCACAATTCGCCAGTCTACGCTGGCATCGTAAGCGGGAACACAAttcggagcagcagcaaccgcagcccCAGCAATTGCAGGAGGAGCTGGACGTGGATGtcgaggaggaagaggagcaggaggaggaggaggacgatgAGACGTAG
Protein Sequence
MAAEIANSVLSLQPVAIETETPLHWQLEDYAYFHKCGEITTSPDVQCFGFNCAFCPAICLQLSVFIDHIRTQHMQDMRRRYENAAAASASDEKIEQTTQTDLNLMIMNMDTSTTGAAATPPLTTTNKRLKKSTCNWNENVNENENTTPIWDMEMDMALDLVNIVQTTSNNYNSNTGMTATAASAAASPAEIDYVYVMQNPLPPSPPPSTDEQRSPRLLHSMDAFELLHVDSTIVSPHTHPHTHPYKHPHTYAATPLDSVGLLTTPHRYETRRVAMQRKLRDAEKQSATTADEEEQTQQQQPEQQQQQQQLQLQLQQQLEEENVLELTPPATPPTPLPPTSPTSSVASSVDMKLRTRRELERNREFVCSLLVAYERNEKLWNPKHPDYKYNAKRSVYGELAAPLQAVFQMPITGPEIFAVLKELRGRYRRELSKLNSLGGKYKSRLWYFEKMHFLRGVIEHKRAEREAKSESAESEKSSDNESTTKSAQYREVLSCIIDCFRRQESLWNPQHFDYNNCSKKELYREISVELREELNYELSGEECFKEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDELEFLHKILQDQIFNKISKKKGVVETIQRTKFINASCISFDTPDDQLQFVEIYRNYPALWDVDHPDFRSNAYRSQALGQMLEELNTTFQCSYTPAQLEKTLFELRKDYSAQKRKILTNASGSSSIPLLHAKLGQFLEPNLGPFRCDVCGELIKTCDQFKVHRAAHDGTQPFICTLCGKGFQMPCNLTVHIRRHRRDFPYACEQCDKRFATSTEVAIHMRTHTGERPYICDLCGKSFKTWSFFDIHRRTHLNQSTFHCPICDKGFYEKNRFTDHMNAHLNIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCATCGKRFAQFASLRWHRKREHNSEQQQPQPQQLQEELDVDVEEEEEQEEEEDDET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00543926;
90% Identity
iTF_00513633;
80% Identity
-