Basic Information

Insect: Drosophila silvestris
Gene Symbol: -
Assembly: GCA_035043445.1
Location: JAWNMZ010000170.1:4130691-4133458[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.1 2.1e+02 2.7 2.6 2 23 334 356 333 356 0.95

2 9 0.0057 0.38 11.3 0.5 3 23 414 435 412 435 0.94

3 9 0.00015 0.0098 16.3 0.2 1 21 478 498 478 499 0.96

4 9 0.55 36 5.0 3.5 3 23 508 529 506 529 0.94

5 9 3.2e-05 0.0021 18.4 1.8 1 23 535 557 535 557 0.98

6 9 0.0043 0.29 11.7 0.5 1 23 562 585 562 585 0.96

7 9 0.12 7.8 7.1 0.6 2 23 593 615 592 615 0.95

8 9 0.56 37 5.0 1.2 2 23 622 643 621 643 0.94

9 9 0.0015 0.099 13.1 1.5 1 23 648 671 648 671 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.1	2.1e+02	2.7	2.6	2	23	334	356	333	356	0.95
2	9	0.0057	0.38	11.3	0.5	3	23	414	435	412	435	0.94
3	9	0.00015	0.0098	16.3	0.2	1	21	478	498	478	499	0.96
4	9	0.55	36	5.0	3.5	3	23	508	529	506	529	0.94
5	9	3.2e-05	0.0021	18.4	1.8	1	23	535	557	535	557	0.98
6	9	0.0043	0.29	11.7	0.5	1	23	562	585	562	585	0.96
7	9	0.12	7.8	7.1	0.6	2	23	593	615	592	615	0.95
8	9	0.56	37	5.0	1.2	2	23	622	643	621	643	0.94
9	9	0.0015	0.099	13.1	1.5	1	23	648	671	648	671	0.97

Sequence Information

Coding Sequence: ATGGCCGCCGCAGCGGATGCTGCAAAATCGAACGCGTTGCTCGCGACGAACAAAGccaataatacaaaatgccGCGCTTGCCTCGCCGTCGGTCGCCAGACGGTCAAACTGGATGCCAAAATACCGGAACTGAAGACCGCGCGCACCTACGGCCAGGGATTGCGCCAGTGCACGAATATACCGTTAACCGCTCGCTCCGCCGGCGGCTACAGGTGGCCCATGCAGATCTGTTTGCGCTGCTGTCGCGCCCTCGAGGTGACCATGCATTTTGTGGAACTGACACTGGAATCGAATCGGAAATTGTTTGCTGAATCGCAAAATCTCAAgtcgatgacgacgacgacgatgacaatGACGAGTGCTTCGGGTGAGCTGAAGCGCAAGGCGAGTGGTAGCAGTGAGCTGTTGCATTGGAATCAATTCATTCAGGAATTTGAGCAATTTGTGGAGAGTTACGATGGGATCACAGCGCCCATCGAGGAGAACGTGCTGTACATGCGGGGTGCCAAGGTGCCACGCCTCGATGCGGACATAGCGCCCAACAGGCAGCCACCCGAGGAGGATGATGTCATCTTATTTGATGTAAAGTATGAGAGCAATGATCAGGATCAGGAGGATGAGAACGATGGCTCCGATGCGAAGAATAGCGAAACCTTCTATGACACTAGTATTATGAATGAGAGCAACCAATCCGCCGCAGCTGGCATTAAAAGCAGCgccgagaacaacaacaattataattttaataacaagAATGGGGATGTGGAGGGTGATCTCATCCAGCGTGCCCTCTTCATGACGCTCAACGAtgatgccagcagcagcagcagccaaacaacaacgCATGATTTACAATCCATTGAGTCCATCAAAGCcacattattaaaatCTacggaggagcagcagctggcaggGACAAGTGGCAGCAGCTTGAGGAGCATTTTGACTAGCAAATCAAATCAGCCCAGCAGGGAGATCAATGTCCAGATACCGTTGCTCAGCTGCAGCATGTGCAAACAGACGCACACGGAAGCCAAACAGATGAGGACACACTATATGCGTGCCCACAGCTGTGATGTGCCCGAGGATGATATCATTGGCCTGACCAAAAatcAAAGCTTTAAGTGTCGTCCATGCAATGATTATGTGACAAACAGTCGCACGGATATGCAACAGCATCTGATTGAACACCACAAAATCGATGGGGATTTTGAAATGTATTGTTATGTGCAGCAGAATTGTCCCGCCTGTGGGCGCATCTTCAAGGATCAGCGCTCGGCACGCACACACTACACACGCATGCACacaccacaacagcaacaacaacagcaacaacaacagcagcaacaacagcagcagcagcttcagcaacaacaaccgcaacagttgcagccacAATCTGGCAATTCAgttgagcagcagccgcaacaatttGTGTGTACCGCTTGCGATAAGGTATTCAATTTAAAGGGCAGCCTGCAGGCGCATCAACGTTTCTGCCAGGTGAAGCAGCCGGTGCACTGCACCTTCTGCAAGCAGCAGTTTAGCAGCATGCGCAAATACGagttgcacttgcaacagcagcacgcTGTGGACACGTTGCACGAATGCGAGATATGCCTGAAGAATTTCAAGAATAGCGATTCGCTGGCAGTGCATCGCAAGCGGCACTCGGAGCGACATTTCCACTGTGACAAGTGTTCGCTGAACTACATCAATGCGGCGGAGTTGCGGGTGCACTACGAGCGTGCCCATGTCCACGAGGAGCAGGTGGTCACCTGTCGCAGCTGTGACAGCACATTTCAGAATTACGCCCTGCTTCGCGAACACGAACAGCGCTCGCATCAAAAACTCAAGATTTGGCGCTGCGACAGTTGCAGCTTCGAGACGAAATCGCGTGCTCGACTGCGTCAACATCAGTACGAACACATGGACTATCCGTACAAGTGCCAGCACTGTCCCGAGGAGTTTGCTGATCGCGGCAAAATTCGTCAACATTCCAAGAAGGTGCACTCGGTGGAGCTGAGCGATGAGCAGCTGGCGGATATGTTTCGGGAACGCATCGGCTACACCAATCGCCATGATGCATTCAGCAAGACAAACACCTCCCTGGAGATACCCGGTTTCAGTGATGATTGCTTTACGGAGCTGAAGAGTCTGGGCCTAGACTATGATGATATAACAACCGATCTCTTCTCGAATTCCATTAGTGCACTGGACACTCTGCTCGAATTGGTACCCTGA
Protein Sequence: MAAAADAAKSNALLATNKANNTKCRACLAVGRQTVKLDAKIPELKTARTYGQGLRQCTNIPLTARSAGGYRWPMQICLRCCRALEVTMHFVELTLESNRKLFAESQNLKSMTTTTMTMTSASGELKRKASGSSELLHWNQFIQEFEQFVESYDGITAPIEENVLYMRGAKVPRLDADIAPNRQPPEEDDVILFDVKYESNDQDQEDENDGSDAKNSETFYDTSIMNESNQSAAAGIKSSAENNNNYNFNNKNGDVEGDLIQRALFMTLNDDASSSSSQTTTHDLQSIESIKATLLKSTEEQQLAGTSGSSLRSILTSKSNQPSREINVQIPLLSCSMCKQTHTEAKQMRTHYMRAHSCDVPEDDIIGLTKNQSFKCRPCNDYVTNSRTDMQQHLIEHHKIDGDFEMYCYVQQNCPACGRIFKDQRSARTHYTRMHTPQQQQQQQQQQQQQQQQQLQQQQPQQLQPQSGNSVEQQPQQFVCTACDKVFNLKGSLQAHQRFCQVKQPVHCTFCKQQFSSMRKYELHLQQQHAVDTLHECEICLKNFKNSDSLAVHRKRHSERHFHCDKCSLNYINAAELRVHYERAHVHEEQVVTCRSCDSTFQNYALLREHEQRSHQKLKIWRCDSCSFETKSRARLRQHQYEHMDYPYKCQHCPEEFADRGKIRQHSKKVHSVELSDEQLADMFRERIGYTNRHDAFSKTNTSLEIPGFSDDCFTELKSLGLDYDDITTDLFSNSISALDTLLELVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560615;
90% Identity: iTF_00525464;
80% Identity: -