Basic Information

Insect: Drosophila silvestris
Gene Symbol: -
Assembly: GCA_035043445.1
Location: JAWNMZ010000138.1:8036600-8042100[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.3 20 5.8 1.1 11 23 337 349 333 349 0.88

2 8 8.5e-06 0.00056 20.2 0.8 1 23 355 377 355 377 0.98

3 8 6.1e-06 0.0004 20.6 1.0 1 23 383 405 383 405 0.97

4 8 3e-05 0.002 18.4 1.4 2 23 496 517 495 517 0.96

5 8 3.2e-09 2.1e-07 31.0 1.6 1 23 523 545 523 545 0.98

6 8 0.0039 0.26 11.8 0.9 3 23 553 573 551 573 0.97

7 8 6.9e-05 0.0045 17.3 1.5 1 23 579 601 579 601 0.99

8 8 0.017 1.1 9.8 1.1 1 23 608 632 608 632 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.3	20	5.8	1.1	11	23	337	349	333	349	0.88
2	8	8.5e-06	0.00056	20.2	0.8	1	23	355	377	355	377	0.98
3	8	6.1e-06	0.0004	20.6	1.0	1	23	383	405	383	405	0.97
4	8	3e-05	0.002	18.4	1.4	2	23	496	517	495	517	0.96
5	8	3.2e-09	2.1e-07	31.0	1.6	1	23	523	545	523	545	0.98
6	8	0.0039	0.26	11.8	0.9	3	23	553	573	551	573	0.97
7	8	6.9e-05	0.0045	17.3	1.5	1	23	579	601	579	601	0.99
8	8	0.017	1.1	9.8	1.1	1	23	608	632	608	632	0.95

Sequence Information

Coding Sequence: atggccATAAATTTCTCGGCCTCCTTTGCGGCCTGCATAGCGGCAGGCCTGAAGGTTCCCCGCCAGATAATGTACTGCATCACCCAGGACACGGGCCAGCCGTACGTCCTCTACAAGGACTCGCAGGACGCGGAACGCAATGCCGGCGCCATTGGCGCCAGTGCCGCACAATGGGGCAGCGACATGTACCCAAACATCCAGCAACAGGCCCAGCAACATCTCagcgcccagcagcagcaacagcagcaacagcaacagcagcagcaacaacaacagaatgcCACAGCTGCCGCACAagcggctgcagctgccgcagctgccGGCCAGCCGCAGAGTCCGCCCGGTGGCCAGGAGCCACGTGACAATGGCAGCGGCGACGGACGCCAGCAGCAGGTGTCGCCATCCTCGAGTCCGTATCCATCggtggtgcagcagcagcagcagcaacgggcCAATGGCAATGCCGATGAGGATGCCATGAATCAGCTTGCCAATCAACAGAACTCCGCGCCAAATCCAAACCAAAGCAGCAACGAGCCGCAGCATGCGTCGGCAAATGGCGGCGAGGCTGGCAATCCGCACGTGCAGCAGAATGGCGGCGGTGGTCAGCCGCAGGGCGATCCCCGGAATGGCTTTCAGACGCCCGACTATTATGCGCCACGGCATGGGGCGGGGCCGCAGGGCGGCATGCTGGCGCCACCTGGCTTTCCGCCGCTGCACTATCTCAAACAGGACGTGCTGCCGATGGAGCAGAATGGCGGCGAATCGTATGCGCTGCCCGAACTGCTGCccggacagcagcagcagcaacagcagcagcagcagcaacagaatgGGACGCAATCGAACCCAAATGCTGGCCAAGCGaatggcaatgccaatgaGGGCAGTGCGGCGCCCAATGGCCCGGCAACGGGCGCTGCTGGCAATGTGGCAACGGGAACAACGGGCGGTCGGACGGGACCCGGACGCCCGCAGAAGAATAAGCCGCACAGCGATCTGCGGCTTATTCAACAATCGCATCTGACCCAACATCTGCGCATCCATGCCAACGAAAAGCCATTTACGTGTCCGTACTGCTCGCGCAGCTTCCGGCAGCGCGCGATACTCAATCAGCACATACGCATCCATTCGGGTGAGAAGCCCTTCGCCTGCCCCGAGTGCGGCAAGCACTTTCGCCAGAAGGCCATCCTCAATCAGCATGTGCGCACCCACCAAGATGTCTCGCCGCATCTCATCTTTAAGAACGGGCCCCATCCGACGTTGTGGCCCTCGGACGTGCCCTTCCCGGGCGATGAGACGGATAGCAAGGGTGACATTGCCGCCGCCGGCGGTGGCTACCATGACGATGATTCCCAAGGCACACCCGATGGCAGCGGTGGCATGCACTATCCCTCCTACTTCAAGGATGTCAAGGGCCAAAAAATATTGCCGGAGGTGTTGCAGCACATCGGTGTGCGGCCGGCGAATATGCCGCTCTACGTGCGCTGCCCCATCTGCGACAAGGAGTTCAAGCAGAAGACAACGCTGCTGCAGCACGGCTGCATCCACATCGAGTCCAGGCCGTATCCCTGCCCGGAGTGCGGCAAACGCTTCCGCCAGCAATCCCATCTCACGCAACATCTGCGCATCCATACGAACGAGAAGCCCTTCGGCTGCATGTACTGTCCACGTTTCTTCCGCCAGCGAACCATTCTGAATCAGCACTTGCGCATTCACACCGGCGAGAAGCCGTACAAGTGCACCCAGTGTGGCAAGGACTTCAGACAGAAGGCGATTCTGGATCAGCATACGCGCACCCACCAGGTAGGAGATCGTCCGTTTTGCTGCCCCATGCCCAATTGCCGGCGACGCTTTGCCACCGAGAACGAGGTGACGAAGCACATTGACAACCACATGAATCCCAACAGCACCAAAgtgcgacgccagcagcaacagcagcagcaggtgcaacagcagcaggtgcagcagcagcaacagcagcaacaggtgcagcagcagcaacagcaacagcagcagcaacagcagcaaaataacGTTGCTGCCTCCGCTGCCGTTGTCGCCAATCATCTGATGAACGATGTGAAGAGTTTGGCCGCCCAGCAATtcctgaacaacaacaatcccgCCGCGGTGGACAACAAGGCAAACATATTGCCGGCGCGCAGCATGGCTGCCaatgcagcagcggcggcggcagttGCCCAGCAATCGGTTGTGAAGAACGAGCTCTATTTTCCGCAATGCTACGGCCCCCCCTTCCAGCATCCGTTccatgcccagcagcagcagcagcaacagcagccgagtGCGGCGCATGCGAATGGACCCACGCCGCCGGTGACTGTAACTGTGGCGAATGCGGTGGCGCCTGGCGTTGTGGTGCAACAGAATTCGGCCACCTCTGTGGTGGCTCAcaccgaCAAGTGCACATCATATCACTTCCGCGGGAGCCGCAACGGCACCGCCCACATCGACACCGCCCCAACGGTGGCAGCGCCGCAGACGGTGACGTTGTCGATAacgttgccgccgccgccatcgGCGCATCCGCCGCATCCGCATGCAGGACATGCGTTGGCGGCCACGCCCAATGGCGTtgcgccaccaccgccgccgcccaCACTGTCGCATGCGATACccatacacccacacatacactcgATATTCGGATCTCTATGA
Protein Sequence: MAINFSASFAACIAAGLKVPRQIMYCITQDTGQPYVLYKDSQDAERNAGAIGASAAQWGSDMYPNIQQQAQQHLSAQQQQQQQQQQQQQQQQNATAAAQAAAAAAAAGQPQSPPGGQEPRDNGSGDGRQQQVSPSSSPYPSVVQQQQQQRANGNADEDAMNQLANQQNSAPNPNQSSNEPQHASANGGEAGNPHVQQNGGGGQPQGDPRNGFQTPDYYAPRHGAGPQGGMLAPPGFPPLHYLKQDVLPMEQNGGESYALPELLPGQQQQQQQQQQQQNGTQSNPNAGQANGNANEGSAAPNGPATGAAGNVATGTTGGRTGPGRPQKNKPHSDLRLIQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPGDETDSKGDIAAAGGGYHDDDSQGTPDGSGGMHYPSYFKDVKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQVGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPNSTKVRRQQQQQQQVQQQQVQQQQQQQQVQQQQQQQQQQQQQNNVAASAAVVANHLMNDVKSLAAQQFLNNNNPAAVDNKANILPARSMAANAAAAAAVAQQSVVKNELYFPQCYGPPFQHPFHAQQQQQQQQPSAAHANGPTPPVTVTVANAVAPGVVVQQNSATSVVAHTDKCTSYHFRGSRNGTAHIDTAPTVAAPQTVTLSITLPPPPSAHPPHPHAGHALAATPNGVAPPPPPPTLSHAIPIHPHIHSIFGSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548975;
90% Identity: iTF_00482402;
80% Identity: -