Basic Information

Insect: Drosophila silvestris
Gene Symbol: -
Assembly: GCA_035043445.1
Location: JAWNMZ010000039.1:1257195-1260156[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.2 14 6.4 0.2 1 10 52 61 52 65 0.86

2 9 2.1e-05 0.0014 18.9 5.5 1 23 471 493 471 493 0.98

3 9 0.00014 0.0096 16.3 5.1 1 23 499 521 499 521 0.98

4 9 2.5e-05 0.0016 18.7 2.8 1 23 527 549 527 549 0.98

5 9 4.1e-05 0.0027 18.0 2.6 1 23 555 577 555 577 0.99

6 9 2.3e-05 0.0015 18.8 0.4 1 23 583 605 583 605 0.97

7 9 2.1e-05 0.0014 18.9 0.2 1 23 611 633 611 633 0.98

8 9 2e-07 1.3e-05 25.3 0.8 1 23 639 661 639 661 0.98

9 9 0.00014 0.0095 16.3 1.8 1 23 667 689 667 689 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.2	14	6.4	0.2	1	10	52	61	52	65	0.86
2	9	2.1e-05	0.0014	18.9	5.5	1	23	471	493	471	493	0.98
3	9	0.00014	0.0096	16.3	5.1	1	23	499	521	499	521	0.98
4	9	2.5e-05	0.0016	18.7	2.8	1	23	527	549	527	549	0.98
5	9	4.1e-05	0.0027	18.0	2.6	1	23	555	577	555	577	0.99
6	9	2.3e-05	0.0015	18.8	0.4	1	23	583	605	583	605	0.97
7	9	2.1e-05	0.0014	18.9	0.2	1	23	611	633	611	633	0.98
8	9	2e-07	1.3e-05	25.3	0.8	1	23	639	661	639	661	0.98
9	9	0.00014	0.0095	16.3	1.8	1	23	667	689	667	689	0.99

Sequence Information

Coding Sequence: ATGGACACGGCGAAAAAATTGTGGATAcactgcaattgttgttacGATTTTTATATTGATCAGCGGATCATATTTTTGCTCGCCTGCCAGCACCTGGCTTGCGAGAAATGCGTCACAGCCAGCATTGGTCGAAAGGCCGGAGATGCGCCCTCCTATATGTGCCCGATATGTGGCAAAAAGGTGCGTGGGCGTCAGGTAAACAATGCGCTGCCCACAAATCTGAAGGATATGTTTCATCCGGAGCCGTGGCGTGATGGTCTGCCCCATGACATCATCGACACCTTTCAGAAAGACCATCGAAAGAGATTGGAAGAGCACATTGCGAAAAAAGCAAAAGATGTGGAAAAGTTGCACAAGGACGTGCAGTTGGCATACAAAGTGTGTCAGAAGCAATATGTGGAGCTGCATCGGAATCGTATGGCACGTAAACAACTCGAGTTTCGTGCGCGccaaatcaaatatcaaacTGAAATACAGAGGATGGAGACCCAACAACGGCAACTCAAGCAGCGGAAATCGGAGCCTTCAATCGGATCATCGCAGCTAACGTCAGccaaGTCGGGCGTTGTCCTCAATTGCCGCACATGCACCCGGGCatgtaaacaatacaaatcgCTCCAAGATGAAATTGAGATCGGTCCCGAGGGCAGCACCACGTTAGCGCACATGCTCCACTATTGCTCGAATCTATCGTTTGAGCCCCAGGATGGCGCCTCAATGCCCCAGcacatttgtatgcattgCCTGCAGCTGTTGGAGCAGGCGTTTAATTTTAAGCGCATGGTCATCGATTCCGATGAACTGCTCCGTTTAGGTCTCGAGGAGGTCGATAGCACGTCTAATACCAATCAAAATCCCAATGCCACTGACAATAACAACCAGGAGTATGTAATGATTGAGCTGTTGGGCGATGAAAACGATACCGAATCTGTGACCAAAACGAATGCCGCAACGCTTGTCGAGGCGTGCTCTGAGCAGGAAAAGGATATGGAGCCAGAGGCGGAACAAGATGAATTTATTGTCGATAATCCGGATTTGGATGCATATGTTGAGACAGAAGATGCACTCGATTTCCAAACGACAGACATCGAGTATGTGACAATCAAAGCAGAATACGACTCGCAAGTTGAGGACGAGGATGATATCGAAATTATGGACTCGCCCGTCCTCGAAACGGTCAACGACCAAATGCAAATCCAAATGCTTCACGATCACATGGTCATCCTGTCCGGCGAGGAACAGATCGATGAGGTAATTGGCGAAGTCGAAGCCGACGATATACTGGACATCGAGCGCGAGGAGCATTTGctAACGGGTGATAGCGAGGATGGTGAGGAATTTCTGGATGAGTCAATGACCGATGGGGGATCGCTACTGGTTGTCGCCGGACCTGGCGGCGAGGTCCTGCCCCATGTGTGTAATGTGTGCAACAAGGCGTTCCGACAACAGTGCCGTCTCAATCAGCATATGCGCTCCCATGTGGACGAGAAACTGCACAAGTGCGAGGTGTGTGGGAAGAAACTGAAACACTTGCGCAACTACAAGGAGCATATGCTGACGCACACGAACGTTAAGCCGCATAAGTGTTTGGTGTGTTCCCGCTTCTATCGCACCACATCCAGTTTGGCTGCCCACATGCGCACCCATGCCGAGGACAAGCCGTACAAGTGTGATCAGTGCGGACGCAGCTATGCGGCCTTTGATCATCTGCGACGGCACAAGCTGACGCACACCGGCGAGCGTCCATATGCGTGCGATCTGTGTGATAAGGCCTACTATGACTCGTCGTCGCTGCGCCAGCACAAGATTAGCCATACGGGCGAGAAGGCGTTCACCTGCGAAATCTGCGGGGTTGGCCTCTCACAGAAATCGGGCTACAAGAAGCACATGCTGGTGCATTCCGGCGAAAAGCCGCACAAATGCCCCATCTGTGGGCGTGCCTTTACCTTCACCAGCAACCTGAACGCCCATGTCCGGCTGCACTCCGGCGAGAAACCATTCAAGTGCGACAAATGCATGAAGGCATTCCCAACGAAAAAGCGCCTCAACAGCCATCTGCGTGTGCACAATAAGGAGGCGCCCGTCACGACAACCAGCAACATTATCAGCCCCGGCACCAATGGGCAGTCGGAACGGGCAGCACTGGTTGCAGCCGGCCGTCGGGCGGCCATCAATATGACCGATGGCATGGATCATCAGGTATCCACATCCAAGGTAGTTGTGGTTCTATAA
Protein Sequence: MDTAKKLWIHCNCCYDFYIDQRIIFLLACQHLACEKCVTASIGRKAGDAPSYMCPICGKKVRGRQVNNALPTNLKDMFHPEPWRDGLPHDIIDTFQKDHRKRLEEHIAKKAKDVEKLHKDVQLAYKVCQKQYVELHRNRMARKQLEFRARQIKYQTEIQRMETQQRQLKQRKSEPSIGSSQLTSAKSGVVLNCRTCTRACKQYKSLQDEIEIGPEGSTTLAHMLHYCSNLSFEPQDGASMPQHICMHCLQLLEQAFNFKRMVIDSDELLRLGLEEVDSTSNTNQNPNATDNNNQEYVMIELLGDENDTESVTKTNAATLVEACSEQEKDMEPEAEQDEFIVDNPDLDAYVETEDALDFQTTDIEYVTIKAEYDSQVEDEDDIEIMDSPVLETVNDQMQIQMLHDHMVILSGEEQIDEVIGEVEADDILDIEREEHLLTGDSEDGEEFLDESMTDGGSLLVVAGPGGEVLPHVCNVCNKAFRQQCRLNQHMRSHVDEKLHKCEVCGKKLKHLRNYKEHMLTHTNVKPHKCLVCSRFYRTTSSLAAHMRTHAEDKPYKCDQCGRSYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKISHTGEKAFTCEICGVGLSQKSGYKKHMLVHSGEKPHKCPICGRAFTFTSNLNAHVRLHSGEKPFKCDKCMKAFPTKKRLNSHLRVHNKEAPVTTTSNIISPGTNGQSERAALVAAGRRAAINMTDGMDHQVSTSKVVVVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00511439;
90% Identity: -
80% Identity: -