Dsil013653.1
Basic Information
- Insect
- Drosophila silvestris
- Gene Symbol
- retn
- Assembly
- GCA_035043445.1
- Location
- JAWNMZ010000166.1:5782976-5791675[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-27 1.2e-23 83.3 0.0 2 89 20 105 19 105 0.96 2 2 2.9 5.6e+03 -2.2 0.1 61 61 236 236 208 263 0.57
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCGCTGACAACAATTTCGCGACCACCGTTGCCTGGCGGCATGCAACAGATGTCGCCACTAGCGCTGGTCACACACGCGGCGGCTGCAAACAATCAGCAGGCGCAGGCAgcggccgcagcagcagcagcacatcgaCGGCTGATGGGCGGACCGGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGCTCATACAGGCcaagaaggagcagcagcagcagcaacagaatgcACCAATTCTGGGCGCCACACATccccaccagcagcagcagcagcagcagcaacagtcgctgcATCatcacacaacaacaacaacaacagcagcagcgacagcgctCACAAAGCCCCGAGCTGAGCACACGTGA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQNAPILGATHPHQQQQQQQQQSLHHHTTTTTTAAATALTKPRAEHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -