Basic Information

Insect: Drosophila serrata
Gene Symbol: -
Assembly: GCA_002093755.1
Location: NW:2139814-2176573[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.014 0.92 9.8 0.6 1 23 1357 1380 1357 1380 0.96

2 8 0.0076 0.5 10.6 0.2 1 23 1385 1408 1385 1408 0.98

3 8 0.0025 0.16 12.2 1.1 2 23 1638 1660 1637 1660 0.95

4 8 0.00045 0.029 14.5 2.1 1 23 1668 1690 1668 1690 0.98

5 8 1.6e-05 0.001 19.1 0.7 1 23 1697 1720 1697 1720 0.97

6 8 5.4e-05 0.0035 17.4 1.4 1 23 1726 1748 1726 1748 0.96

7 8 7.9e-07 5.1e-05 23.2 1.7 1 23 1753 1775 1753 1775 0.99

8 8 0.52 34 4.9 3.8 1 23 1780 1802 1780 1802 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.014	0.92	9.8	0.6	1	23	1357	1380	1357	1380	0.96
2	8	0.0076	0.5	10.6	0.2	1	23	1385	1408	1385	1408	0.98
3	8	0.0025	0.16	12.2	1.1	2	23	1638	1660	1637	1660	0.95
4	8	0.00045	0.029	14.5	2.1	1	23	1668	1690	1668	1690	0.98
5	8	1.6e-05	0.001	19.1	0.7	1	23	1697	1720	1697	1720	0.97
6	8	5.4e-05	0.0035	17.4	1.4	1	23	1726	1748	1726	1748	0.96
7	8	7.9e-07	5.1e-05	23.2	1.7	1	23	1753	1775	1753	1775	0.99
8	8	0.52	34	4.9	3.8	1	23	1780	1802	1780	1802	0.96

Sequence Information

Coding Sequence: atgaGTGCCAACAGGAGAAGAGTCTTCGATATCTTAGGTGCAACACCAGCTactgcaacggcaacggcaacggcaacggccaACGAGCAACTTTCTCTACTGCCGGCTGGCAATGGCGACGAGGACGCACTGGAAATGCCACGGAtatgccgctgctgctgcaagcGGGACTTGGAGCTACTGGGGTTATTCGATGCCAACCAGCCGAGTCTGGTTGAGGCAACTTTAGCACCAAGCACAGGAACATCAACTGCATCAGCAACGACAACAGGATCGACAGCAACATCAgaaacagcatcagcaacaccagcaacatcagcaacaccagcatcaacaggagccCCAGAGGCACTACACAACTCAACTGCAGTCACAGCCACAGTCACGCCTCTCTCCAGCAGCACACCGCCTCCAAAGAGCCGGACTACACTTGCAACcacatcagcaacagcagcagcagcagcagcaacagcagcagcagcagtaggaggaggagcaccacGTGGCCGCAGCAGTGACAATCCCGTCGAATATGCCCTCAGCGGGGCCCACAGCAGCATGGACATTGTCCTCGAGGAGATGATCATTTGGATGTTGAATATAAATCGCGACGATGGCCTTCCACAAGAGATCTGCCGCCAGTGTATGGCTCAATTTCTGATGGTGGCCAAGTTTCGGCGGAAATGCGTACGAATGCAACAGCGTTTGCAGGACTTTGCCCAGGATATATCCGATCGCCAGGCGGCCAGGCAAGCCAAGCGACAGCAAAAACAAGCACAAAAGCTGGAAGAACCCAAGAAGGAGGCTCAGCCAGCACCTCAACCGGAAAGGAAACGTCGTATGGTATCCGAATCGGACAGAGAAGCAgttgccgccgccaccgctgctgctgctgcggaaACTCCTGCAGAGATTCGCACAGAATCACAGAATCTTCCACCTCCGAAGGCTCGTCGCCTCCAGCTACGTCTGCGTAAATATCGCGCCCTTTCCATCGGCTGTGAGATGGAGCATCGCAGTGCCATCGATGCCAGCAGTATGCCCTGGAAGACGAAGGCCGCCCGCAAACAGATCTCCGAGACATGGACATCGTCCAGTATAACCACCGAAATTACATCGCCAACTCCTAACTCTGATCAGGAATCAAAGAGTTGCAGCAGCACGGAGCGGATGAGCGATATGTCCGTGGGTCCCTGTTGTGGCTTTGAGAGCGACAGTAGTCCCTCCTCCACATCCACCCAATCCACGGTCACCAATGGATTGAAGTTTCCCAAACGTTTGGCGGGTTATCAGAGTACACCCAGGCGTGGAAGGCGCGTAAGAAATTTCCCAGTCTATAACCCAACCAAGAGGCAAAGGCGATCGTTCGTCAAGAAGGAGCTGCAAGTGGAGCTGCAGGTTCAAGCAGTGGCCGAAGAGAACACAAAGTCTGATCAAATGGAAGTTTGCCAGCCACAGTCAAAGGCAGAAAACTGCGACGAGGCCATTGACAGCACTTCAGACATACCAAAAGAGACGAGTGAGCAACTGGAGCTAAATGAAGTCAATTCAAATCATAGTGGAGTTGAGGTCGCCTCGGAGAAGGAGTCGACGAACACGTCAAATGGTTTGACAGAAAGTCGTACCCAGGAAGGCTCCTTGACGGTGGAATCAGTCAATTCAAAGGAAGTCTCAAATGGCCCGGAGAAAGCCACTTCCGATGAAGGCAAAGAAGAGCCAGCGGAAGCAAAAGAAGTCACCAATAATATAAGCGAACAGGCCGCTGACCAAAAAGACACAGAAATAGTTAACAAAACGGACGAATCATTCTCAAAGGGTTCACCGGAAAAAATGGAAGAAACTAGTGATGACAAAGACACCAGTTTAATCGATGATTTACAGTCTCCGAACGATCCCCTGCAGTCGGAGGAGCTGACCTCATCCACGGAGACCAGTGAGGACCAACAGGAATCTGTTGACCAGCCCGAAATCATTGTGAGCATACCCCTCGAGGTGCTCGATGAGAATCTGCAGCGTCGCCTAGTCGTGGATCAGGATATCGAGAAGAAGTCGCAGGACCGCACCACCTCGACCTCCAAGGAGCTTCAGTCCGTCCAGCCCGACGATGTAAACAACAATGCTAATgatgaaaatttttgccagAGTGCTACAGCAGATAGCTTCAATTCTACTGTGGCACTCCGAACCAATGAAATTGAAGCAAAACCAGAAGGTGGAGGTGGTGCCATGGATCCAATCGCAGAAGAAACCCCAAGTGCGGAAGAATCCCCGCCAGAAGAATCGGATACTGATGAGGAGATGCCAGTGGTGAGGTCTGGACCCACGCCCATGGATTTTATGGCCGAGTTTGCTAAGCACTGTGAGAATGGTATCGAGCAGCTGAAGGCAACCACGCCGGCTCCTTCGCCTACGCCTTCGGAGCTGCCACTGCCCCTTAACGATTTGGAGGCAAAGCAACAGCTGGAGGTAGAGATGAATGATGTGGAGACCACGCTGAATGGCATCCTTAACGAGATGCAGGACCAGCACATGTATACACCGAACTGTGCACACATCGATGAGTTTCTTACGCCCGCCGATTATGCTCCGTTGACTGAACAGGAGCCCTCGGTTTCGTCGCCGCCCAATCCCTTCGAGGAGAGTCCAGTAACCGAACCGGAAACGAAACAACCCGCAGCCAGCGAAGATCTCTTTGACAACAGCAACTTTAGCAATGAACTGATAGGTTTCCAGAACGATATTCCTTGCTTTGAGAATATTGATTCATCTCCGGAATCGGGACAACAGAGTTTGCATTTAGAGTTGACACAATTCCTGAGTGATCTCCAACCCTCACAGGAGGAGAAACCCACCGTGGAGGCACCGGTGGAGATACAGACTGATGTACAAGCTGAGGCTCAAGTGCAATCCCCGAATGCGTCAGAAACTTTATCTCAAAGAGATCCCACAGAACAGCATGAGATACAAATTCAACCCCAAGCCGAATCACAAATGCAGCACGAAATCCTGACGGTTCAGGCTCCGGAGGAGCATCCACAGAACCACGCGCATATTGAACATCAGATCGTGGCGGTtgaaaatcaaattcaattgCACAATCCATCTCAGTCATCAAACACGCACCAAATGCTGCAGCCACAGCCTCGAATCCAAAACCAAGCGCAACCAACAGTACAGATGATGCAGCAGATCCAGCCCCACGGCTACTCCCAGCTGCAACTACAGTCCTCGCAAGTTGTCCCACATGTCCAGTCGCGGGACACAACGACGACAGTAACCTACGAGCAGATCTATCAGCAGCACATCGTCCAGCAAACGGTTCAGCAGTCCTCCAATAAGGTGCAGCTCATCTCTCTGCCCTCGTGTGCTGGGGAAACTAGGCAATGGCAGCCACAGcaccagcaacaccagcagcaggtgCAGTGGTCATCGGTGGGTGGACTGGAGTCCATCAAGAATTCACCCATCGAGACCACTTACTACATTAGTGCCAGTGACCTGTATCCGCAGCAGACAACGGAGACTTATACCATGCTGCAGCCGGCCTCCGTGGAATCCAATGAGAACTATATGCTGGAGCAGGTGACTCATCAGCAGAGCCAACAACAGcaccatcatcagcagcagcaacagcaacaggaacaacatgagcagcagcaacagcaaccgaTCATGATTGTGATACAGCCGGAGATGCAGCAGCCGGTGGCGTCGGCCAGCAATCCGCAACAAGCACCACTCCACCGATACGGTGCTCCCATCAGCAACGATCTCCATCGCCTGCAGTACACCAAACGGTTGCAGCACCgccaacagcagcatcagcaacaacagcaacaacagcaacatcagcaacatcgGCAGCATCACCTACCTGTGCACAGTCATCCGGTAATAGGAATGCCTGGAGCAACATCAATTTCAACCAAAGTACATCCCATACCAGCCACAACGCCGTCTGGTCGGCCATTAACCCTCAAGTGTCGCTTCTGCCAGAACGGTCCAAGGTTCTCCAATAGCCTGGAGTACAGCCGTCATATCATTGAACTCCATCCCGCCATAGCGCCCTTCAACTGTCCGCATTGCCCACTTGCCTTTGCCGGCAGGAGTAAGCGGTCGCAGCACATTCTCAGCAACCATGTGGTGCAGCAGTACCAGTGCGGCCAGTGTTCGCAGGTGTTTCCCGCTCAAAAGGCCTTGGACCTGCACATTCAGCGCTTCCACATGCCTCTAAAGACAGTTGGCAGCGTCCGAGTGGAGGATGTTCAGCTGCAGATCACAAACGAACGACAGGAACGACGACCGCAACTTCCATATCAACCAAGACCATATCAACCGCGACAGCAACGGCAACCACAACGAACCCCGCATCATCGTCCGCAACAAGagcagccgcagcagaagctgcCAGTAATGCAGCCATCACATTCGCCGCATCCGTCAACAGCTATGGATGTCCAGGCTAGCACAACGATTCCGCGAAAGATTCTTTGCTGTCCCGACTGCGAGGATTGCACAACAGGTCACAGTCATACCAGCAGTGTAGGATTCGAGGAACAGTCACTGCAATCTCCTCCAACGGTGCTCACTCCGCCCTCGACGATCGTTTCGGCTCCATCGCCTCAGCCCATGATGGTCTCGCAGCATATAACGCTGCCCTCGCCAGAACAATCCGAGCCAGATTCCACGACCACGTTACGGCAATACCGTAAACGAGGCGTCATTGTGGGACCCCAAGGTCCGCTGCATTTGGCCACGCCTGTGGCATCGCCCTCGCCGTCATCTTCTCCTTCCTCCTCCACCTTTGACCATGTACCACCAGCGTCACCGGCTACACCCGCTTCGCCGGCCCCACCTCAGTCGCCCGCCCCGCTGTCCTGCGTGCCGGTGAACGAGCTGCGGACAAACAATCAATGTCTATACTGCGAAGAGCGTTTCACCAATGAGATTGCCCTCAAGAAGCATCACCAACTGGCCCACGGATCCCAGACCACGATGCCATTCGTGTGCACCATTTGCAAGCGAGGCTATCGCATGCGAACTGCTCTGCATCGGCACATGGAATCCCACGATGTGGAGGGCAGGCCGTACGAGTGCAACATTTGCCACGTACGATTTCCGCGCCCCTCGCAACTGACGCTGCACAAGATTACTGTGCACCTGCTATCCAAGCCGCACACCTGTGACGAGTGCGGCAAGCAATTCGGTACGGAGAGTGCATTGAAGACGCACGTTAAATTCCATGGTGGGATTGGTTACCAGTGCGACGGATGCGATCGGTCGTTCGAATATCTCAAGGAATTGCGCAGACATCGTCGTACCCACAAAGAGCTGTTTTACAAATGTGAATTCTGTCCACGGTCGTTTCTTCACTTTAAGATATTTCGCGCACACATGAACTCCCATTTGCCACTGGGAGTGTTTCTCAACGAGGAGACCATAGTAAAGACcgtcagcaacagcaacagcagcaacaccaacaataataacaacaacaacaacaacaacaacggcatCCTTAGTAGCGCCAAGCTAGAAAATCCACCAACACCCATCGAGGAGACAGCTCCCATGAGCAACAATAGCGTTTACAACGTCCAAAGCCCAGATGAATATCCCAATTCGGTGGAGAGCAGTGCTGCCACCAGCGTGGCTCTTGAAACGATAGCCCCGACGCCATAA
Protein Sequence: MSANRRRVFDILGATPATATATATATANEQLSLLPAGNGDEDALEMPRICRCCCKRDLELLGLFDANQPSLVEATLAPSTGTSTASATTTGSTATSETASATPATSATPASTGAPEALHNSTAVTATVTPLSSSTPPPKSRTTLATTSATAAAAAATAAAAVGGGAPRGRSSDNPVEYALSGAHSSMDIVLEEMIIWMLNINRDDGLPQEICRQCMAQFLMVAKFRRKCVRMQQRLQDFAQDISDRQAARQAKRQQKQAQKLEEPKKEAQPAPQPERKRRMVSESDREAVAAATAAAAAETPAEIRTESQNLPPPKARRLQLRLRKYRALSIGCEMEHRSAIDASSMPWKTKAARKQISETWTSSSITTEITSPTPNSDQESKSCSSTERMSDMSVGPCCGFESDSSPSSTSTQSTVTNGLKFPKRLAGYQSTPRRGRRVRNFPVYNPTKRQRRSFVKKELQVELQVQAVAEENTKSDQMEVCQPQSKAENCDEAIDSTSDIPKETSEQLELNEVNSNHSGVEVASEKESTNTSNGLTESRTQEGSLTVESVNSKEVSNGPEKATSDEGKEEPAEAKEVTNNISEQAADQKDTEIVNKTDESFSKGSPEKMEETSDDKDTSLIDDLQSPNDPLQSEELTSSTETSEDQQESVDQPEIIVSIPLEVLDENLQRRLVVDQDIEKKSQDRTTSTSKELQSVQPDDVNNNANDENFCQSATADSFNSTVALRTNEIEAKPEGGGGAMDPIAEETPSAEESPPEESDTDEEMPVVRSGPTPMDFMAEFAKHCENGIEQLKATTPAPSPTPSELPLPLNDLEAKQQLEVEMNDVETTLNGILNEMQDQHMYTPNCAHIDEFLTPADYAPLTEQEPSVSSPPNPFEESPVTEPETKQPAASEDLFDNSNFSNELIGFQNDIPCFENIDSSPESGQQSLHLELTQFLSDLQPSQEEKPTVEAPVEIQTDVQAEAQVQSPNASETLSQRDPTEQHEIQIQPQAESQMQHEILTVQAPEEHPQNHAHIEHQIVAVENQIQLHNPSQSSNTHQMLQPQPRIQNQAQPTVQMMQQIQPHGYSQLQLQSSQVVPHVQSRDTTTTVTYEQIYQQHIVQQTVQQSSNKVQLISLPSCAGETRQWQPQHQQHQQQVQWSSVGGLESIKNSPIETTYYISASDLYPQQTTETYTMLQPASVESNENYMLEQVTHQQSQQQHHHQQQQQQQEQHEQQQQQPIMIVIQPEMQQPVASASNPQQAPLHRYGAPISNDLHRLQYTKRLQHRQQQHQQQQQQQQHQQHRQHHLPVHSHPVIGMPGATSISTKVHPIPATTPSGRPLTLKCRFCQNGPRFSNSLEYSRHIIELHPAIAPFNCPHCPLAFAGRSKRSQHILSNHVVQQYQCGQCSQVFPAQKALDLHIQRFHMPLKTVGSVRVEDVQLQITNERQERRPQLPYQPRPYQPRQQRQPQRTPHHRPQQEQPQQKLPVMQPSHSPHPSTAMDVQASTTIPRKILCCPDCEDCTTGHSHTSSVGFEEQSLQSPPTVLTPPSTIVSAPSPQPMMVSQHITLPSPEQSEPDSTTTLRQYRKRGVIVGPQGPLHLATPVASPSPSSSPSSSTFDHVPPASPATPASPAPPQSPAPLSCVPVNELRTNNQCLYCEERFTNEIALKKHHQLAHGSQTTMPFVCTICKRGYRMRTALHRHMESHDVEGRPYECNICHVRFPRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTHVKFHGGIGYQCDGCDRSFEYLKELRRHRRTHKELFYKCEFCPRSFLHFKIFRAHMNSHLPLGVFLNEETIVKTVSNSNSSNTNNNNNNNNNNNGILSSAKLENPPTPIEETAPMSNNSVYNVQSPDEYPNSVESSAATSVALETIAPTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00524663;
90% Identity: -
80% Identity: -