Dseg005236.1
Basic Information
- Insect
- Drosophila seguyi
- Gene Symbol
- pnr
- Assembly
- GCA_008042675.1
- Location
- VNJU01006107.1:755654-759914[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 4.1e+03 -2.6 0.2 22 27 132 137 129 139 0.67 2 2 6.1e-17 1.7e-13 49.8 2.5 1 35 480 513 480 514 0.98
Sequence Information
- Coding Sequence
- atgcaaatttctttACACACTGCCTCGGTGATAACTCGCTATCAGTACCAGAAACGGGTCCAAGCCAATCCCAATCCCTTCACCAAACACATTACAACACGCCAAGTGTGCCTTCTGCGGGAACAATATCGAGTGGCAGTGAACAACAAGCGTACGCTAAGCCTTTTGCCAGCAAAAGCCAATTGGAGTTGTCGGACATCGCCGAAAGATCAGTATTCAAAAGTCAGTCATCGCCGTCGTCGACGGCGACGTCGTCATCATCGACGCAGCAGAACAGATAACTACGGCCAAGAGCGCAGCGGAGGAGATGATGATTCATCACCACATCTTACATTTCAGATATTCAACTGTCTCTCTATTAAGGCAATGCCACACGATGGATTACCCAACTTGATCTGCACTGATTGCAGGGCAAAATTGGATTCCTTTGAGAAATTTCGAATCATGGCGAACAATTCAAATAAAGCTttgaaagaatttttaaatatatcaaaatctCTGTTACTAGATCCAAACGAGTTGGATGATAAGCTTGATGAAATTTTAAAGGCTTCATCGGAGGCTATAGCTGCCAAGGCTCTTACTGAGCTGAGCACATTTTCTAAAGTTAAGTACGAAAACAACAGTAAAGTAGATTCATCCAGCatccatcagcagcagccattGGATCGGAAGATTGAGATTAACAATCAAGAGAgcgcagcgcagcagcagcagcagcagcatagcTTATACCCAGGTTTATTCAAATCAATAACTATGAAAGGCGATCAGTTTATTGCACATAATAAGAAGGTAATGCCCGGATCATCCTCCtcgcacagcagcagcagccagtcTGCGGATATCGAGAAGTATGAGAACCTACAGCAACAGCTCGAGACGGCGGCCGTTCTCATGGATATAAGCAAGAAGATTTCGCACATAAAAAGTGAAGAGGATTTTCATCAAAACTACAGTATTACCATTAACCaagttggtggtggtggtgggtcctccgccgccgccgattACAAGCTAAAGGCACCGAAGGCGAGTACCAGCTCCCTGCAGGATTCTGGCGACAGCTCCGACTCTCACAAACTGGAAATGGACATTACGTCCTCGATAAACGATCGAAAGACCCCGGATAGCCTCAGCTCGGATCATGCAACTGATGCGGCAACCACTCAACTTTGGCAAGCACTGGCCCGTTCAGCTGCTAAAAGCAAAgaggaaaatcaaaatcagGCTACTGAAATAATTCGTAGCATGATGAGCCAGTCTTTCGTGTTTCCGGTTCCGTCAACAGTATCATTTACAAAAGTACCTGAAGAACCCATAGCACTTTTAAAGGATCTATCAGAGGCTCAATCCAAAGCAACTccagaagaaaagaaagataaaAGGaaCACAAACCTTTTTAATGCCATACCTGGTGCTCAAAAAGATATGTCATGTTCCAATTGCGGCACACTCACCACAACAATTTGGCGGCGAAGTGTTCGAGGCGAAATGGTATGCAATGCCTGCGGATTATACTTCAAGCTGCATGGTGTCAACAGGCCGCATTCGATGAGACGCGATACCATACACACCAGACGCAGGCGTCCAAAAGAATTGGAGCGATCAAAAAAGAAACACAAGCAAATGTCATGTTCTACAATGGAACCAACAAAACCAGATTTCTTGACGTCTAGGGAAGCCCTTGATATTTCTGGTCTGGTTTTGAATaaatacaaaaaggaaATGGATGAGTCCGAGGCCGCAGCAGCACTTAAAGATATTCTATTGAGGCGAAAGAAATCGAATTCTTTGCCGGCGTTTAATGATACCTGTGAAAGTGCGGATCTATCCGCACCGCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATAA
- Protein Sequence
- MQISLHTASVITRYQYQKRVQANPNPFTKHITTRQVCLLREQYRVAVNNKRTLSLLPAKANWSCRTSPKDQYSKVSHRRRRRRRRHHRRSRTDNYGQERSGGDDDSSPHLTFQIFNCLSIKAMPHDGLPNLICTDCRAKLDSFEKFRIMANNSNKALKEFLNISKSLLLDPNELDDKLDEILKASSEAIAAKALTELSTFSKVKYENNSKVDSSSIHQQQPLDRKIEINNQESAAQQQQQQHSLYPGLFKSITMKGDQFIAHNKKVMPGSSSSHSSSSQSADIEKYENLQQQLETAAVLMDISKKISHIKSEEDFHQNYSITINQVGGGGGSSAAADYKLKAPKASTSSLQDSGDSSDSHKLEMDITSSINDRKTPDSLSSDHATDAATTQLWQALARSAAKSKEENQNQATEIIRSMMSQSFVFPVPSTVSFTKVPEEPIALLKDLSEAQSKATPEEKKDKRNTNLFNAIPGAQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSCSTMEPTKPDFLTSREALDISGLVLNKYKKEMDESEAAAALKDILLRRKKSNSLPAFNDTCESADLSAPLNLVSSENNAKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00533461;
- 90% Identity
- -
- 80% Identity
- -