Dseg000717.1
Basic Information
- Insect
- Drosophila seguyi
- Gene Symbol
- zfh2
- Assembly
- GCA_008042675.1
- Location
- VNJU01001211.1:31698-45120[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.18 13 6.3 0.4 2 23 124 146 123 146 0.95 2 10 9.2e-05 0.0067 16.7 1.4 2 23 526 548 525 548 0.96 3 10 2.3e-05 0.0017 18.6 0.7 1 23 580 604 580 604 0.92 4 10 0.004 0.29 11.6 0.4 1 22 691 712 691 715 0.91 5 10 6.7 4.9e+02 1.4 0.1 1 21 858 879 858 880 0.89 6 10 0.9 65 4.2 1.9 1 23 904 928 904 928 0.91 7 10 0.038 2.7 8.5 0.5 1 23 1209 1232 1209 1232 0.98 8 10 0.16 12 6.5 1.7 3 21 1397 1415 1397 1419 0.90 9 10 4.3e-05 0.0032 17.8 2.3 1 23 1470 1492 1470 1492 0.98 10 10 0.00052 0.038 14.4 3.3 2 23 1499 1521 1498 1521 0.95
Sequence Information
- Coding Sequence
- ATGTCCAGTACTGATGTGGAAACTTTTAATGGCAAAATAGTATACAATCTCGATGGCAGCAGCGCCTATATTATCGATGCAGATAATGCCAATGATAATGGAAGTGGTGAAACATCGAAGTTTAGGGAAGCAACAGCATCGATTTCAGTAAAGAAGGACTTCTCGAATGCCAAAGATTTCGGTTTTGGGGAGGCGAAAGAAAAAAGGGAAcaacaggagcagaagcagcagcagcaggagcaggagcaggagcaggagactCTGTATAAAACCAGTCCCAGAATCCATTCATTTCGCGTGGTAACGGCGCAGGATGCTAACTCAAATCCAACTAGAGacataatattcaaaattcaaaaacccATATTAATGTGCTTCATATGCAAATTATCATTTGGCAACGTCAAGTCCTTTAGCTTGCATGCTAACACCGAACACAAGCTCAATTTAATCGAGTTGGAACAGCAGCTACTTAAACAGGAGTATTCCAGCGCCATAATACAGCGAAATATGGATGAGAAGCCATCGATATCATTTCTGCAGCCATTGGATATTAATGCCGCCGGTGATGTCGCCGATGAAAAGAATCTACATCAGATATCTACTGATGCGGTTGCTCCTATTCCTCCCGAAACTGATCAACAAGAGAAAGAAAATGATAAACATGATCTGTGCCGAGAGCAAGAGCCTCAGAATGATCCCGAAATCGATCACCAATCCGATCATATTAGTAATAATCAAATGGCAGCACCTAGTGCATactatcatcatcatcaggtGAAGTCATCTGAGAAATTTGGTTCCTTAAACTCAGtaacagaaacaacaaagaCTAATAAACTATTGAAAGTATCTGTACCCTCATCATCGCCCTCAACCAGTTCCGGCGAGGTCTCATCATTATCCCGTACTGATAAtctaagtaataataataataagtcaGTGGAGTCTTCATTTGATGTTGAAATGAATCCAGGCTCATCATCGTCACCTCAAAGAAATGAATTATCAGAGTTTCCCAGCTCTGATTTCTTGGCAGCCACTGCTCCTGGCATATTCCCTCCTCAAGTCGATTCATTCCATGCTTCGCTAGCAGCTCTGGCCGCCAACAATACTGAATCAAATGGCAATCGTGTTAAACTGATAACCGAGTTCCTtcaacagcaactgcagcaacatcagcaacagcaacatcaaagTTCCTTATGTCCCAGCCAATGTCCCGAACATCCTGATTTTAATGGCGTCGATTGTAAAACCTGTGAATTTCTTGACATCCAAGGAAGGACCAAGTCACCATCTTTGCCACAGCTTCAAGTTCCGCCACATCGCTCGCCCTGCAGCAACCTGGCAATGTCTCCTAGTTCATCATCAGTAACCAGCGTGGGAAATGCAGGGGCAACAAGCGCGGGCGCAGCAACAGGCGCCACGTCCAGTTTCACCATTGGTGCTTGTTCGGATCACATCAATGGACGTCCCCAGGGTGTGGACTGTGCGCGATGTGAAATGCTGCTTAATTCAGCGAGACTAAACAGCGGCGTCCAAATGTCCACAAGAAACTCCTGCAAGACCCTAAAATGTCCACAATGTAATTGGCATTACAAATATCAGGAAACGCTGGAGATTCACATGCGGGAGAAACATCCTGATGGGGAAAGTGCGTGCGGCTATTGCTTGGCAGGACAACAACATCCTCGCTTGGCACGCGGGGAATCCTATTCCTGTGGCTATAAACCGTATCGCTGTGAGATTTGTAACTATTCCACGACCACCAAGGGTAATCTCTCGATTCACATGCAATCTGataagcatttaaataatatgcaAGAATTGAATAGCTCACAGAATATGGTCGCTGCGGCAGTGGCCACAGGGAAGTTGCTTCTCTCGAGTAGCTCTTCATCCCCCCAGGGAGCTGGTTCTTCTAATAGTGTTCCTCCTCCAGTTGGTTCCTCGTCCTGTCTAACCTCGAACAATGTGGGAAATCCAGCTATTTCCAACAACTCCAATGCTAGCTCCAGCACGGTcgccagctccagttccaacGTTAACCTAAAGCCAAAGCCCTCATTTCGTTGCGACATCTGTAGCTATGAAACATCGGTTGCTcgaaatttaagaattcataTGACTAGCGAAAAGCATACCCATAACATGGCAGTGCTGCAGAATAATATAAAGCACATACAGACATTTAACTttttgcaacagcagcagcaacaatctAGTGTTTCGGGAGCAATGAGCTCTAGCGGAGTAGCAGGTTCCTTCCTGCCGGAAGTTGCTTTGGCAGATTTGGCTTATAATCAAGCCTTGATGATTCAGTTACTGCAccatcaacagcaacagcagcagtctTCAGCTAATACCAAATTATCACCAACATCTTCGTCGCCAGATCCCTTTAACTTCTCCATTTCACCGAAGCCCGTTGCAAAGATGGCTCACAATCAAGGACTAGGCTTAGGCCTTGGCATGCCAATAGTTGGCGGCATGATAGAAAGCGGGGGTGATTCAACGGGAGATTTATCTCAGCCCATCTCAAAGCCCAACGAATGGCCCTCGGCCCTCTATAGTTGCCTCATTTGCGACTCGTTCAACACCAACAATTTGGATGATCTCAATCAACACTTGCTAGTAGATCGCTCGCGATCACAATCCACCGCCTCTTCGTGCTCCACAGATATAATGCTAAttcacaacaacaactatatATGTCGACTTTGTAATTATAAAACGAATCTCAAAGCCAACTTTCAACTGCATAGCAAGACGGATAAGCATTTGCAGAAACTCAGCTATATCAATCACATTAAGGAGGGCGGCATACGCAATGAGTACAAGTTTCAACAACActttcaacaacaacacaccaATGTTGTGCACGTGAAATGCAATTGTTGtgattttaatacaaattcgATACAAAAACTATCTCTGCACACACAACAAATGCGACACGATACCATGCGAATGATATTTCAGCATTTACTGTATATTATACAGCAGAGCCACTTGAAAAAAAACGACGACGATTCCTGTCCCGATGAAgatcaaaataataagaaacacCTAGTACTTCTTTGTCAGCTGTGCAATTTTACCGCCAAGAACCTCAATGAAATGGTTCAGCATGTGAAGAGCATGAGACATATGCAGGTGGAGCAATTTGTATGCCTACAACGTCGCAGTGAGAATAAAGAAATTCCAGCTTTAAACGacgtatttaaaataacagaATGGACGTATGATAATGAAGatATATCTTACGAATCCGGCGTTAATTTAACAAGAAGCAGCACCACAGCTACAGCCAATGAGGGCTCATCCTTGGAAGCCACCAGctgtgctgttgctgctccaaCAGCATCATTATCTTCTGTGGCTGCTGAagtatcatcatcatcatcctcggCCGTCGTTGCTGGAGCAGATGTCGGTATATTCTCTCCGACAACAACTTCACCCTCAAGTTGTTCAACATCTTGTGGCAAAACGTTGGGTATCAGCGTTACATCTCCAACACCAACTGTGAAtgattttggtttggttttgagtgctccttctgctgctcctACTCCTACTTCTGTTTCAGTTCCTGCTGTCAGCGTTCCAACGACCGTGTTTAAATGCAATCTCTGTGAATATTTTGTGCAATCGAAAAACGAAATGGAAACTCATATCGAAACGGAACACCCTTGCGCTGATCCCAGCGAGGACTTTATAAGTATACCAACAAATACGGCAGCGCTGCAGGCTTTCCAAACTGCGGTAGCTGCAGCAGCCATAGCAGCGGTACGCCAACAGAGAGTCAATGCCATCGAAGCAGTAACGGACATTAAGCGGGAGGAAGTGGATGAAGAGGAAGTAGAGGAAGTTaccaagtcaatagaggtgtCTGAGCCAGTTGAGAAAAAGATTCAAGCAGGAATACAGTGTCCCTTGTGCTTGGAGAATCATTTCCGTGAAAAAACTAGCTTGGAGATGCATTTAACCAGCGTACATAACGTGGCCAAGGATGGGCTATTCCGTCTCTTAATGCTAATCGATCCAAAAGTTTGGgaggataataataataaatgtagcAATTCTTCTACAGAAGAAGCAACGCCCACGCCCGAAGAATGCTCTTCCTCTTCTAGCTTGGCAGCTGTCACCACAAATGTAGTAGGGATGAATGTATTGGGCTGCCAAAAATGCAATGCCAGCTTCAAGCATGACGAGCAACTGCTTCAACATGCTCAGCAAACGCAACACTTTCCCATTCAAAATGGTGAATATCTGTGTCTGGGATTAACGCACACAACTCGTCCCTGCTATCTGAGATTTCGAACCCTTACGGTCATGATTAATCACTTCCAGGACACTCACATGAGCTCCGTGATCTCGGAACGTCATGTCTACAAATATCGCTGCAAGCAGTGCTCTTTGGCATTTAAAACACAAGAGAAGTTGACAACGCACATGCTATATCACACAATGAGAGATGCTACAAAGTGTTCACATTGCCAACGAAATTTTCGGAGTACGCAGGCGCTTCAAAAACATATGGAACAGGTGCATGCAGGCGGAGACGGAGTCAGGTCGAATAGTAGTCCACAGGCGCAGTCGCAATCTACATCCAGCACCGAGCTGTCTGCAGAAGAAGCTTTTGCGGTTAAAGGAGAGGTTGCCTCTATTAATGATGAAATTACGTCACCCCTACTACTTGAAAACCCACAGTTGCTAGCCAAGGAAACTAGCAGCAGGCGACAGAGTCCCACAGCTTCCATTCCTGATAGTCAGACTCAACAGCAATATCTCGCCACTTTGACCAATTTGCTGAAGCAACAACAGTGCAACTCGGAGGTTTTGGGCATGCAGCCAGAGGCTATGCTTCCAGCGGGAGAATTTTCCCAGCATCTACAGaGCCTACAGAATCTGCAGAccatgcaacagcagcagcagccattcGGCGCTGCAATTAATCCAGTGGATATGCTCAACCTAATGCAGTTTCATCATTTAATGTCACTGAACTTTATGAACTTGGCTCCACCATTGGTGTTCGGCGGGAGcggaggagtaggaggagcaGGTGTAGCAGGAGCCACCCATCAAAATAACAGCAATCTCAACTCCTGCTCCTCGTCAGCGGCGGATATTCAACTTATAAACAGTGGGGATTCCGGAAAAGCAACTGCGGCAGTTCCTGCTCTCACACAGAATAATGTCGCAAACTCAAGCACTCAGCTGACTGCAAGCAACCAAAAGCGCGCTCGTACGCGTATCACGGACGATCAACTAAAAATATTGCGTGCTCACTTTGATATTAATAATTCGCCCAGCGAGGAGAGCATTATGGAAATGTCACAGAAAGCTAATTTGCCAATGAAAGTTGTTAAACACTGGTTCCGCAATACCTTATTCAAGGAAAGGCAACGCAATAAGGACTCGCCCTACAACTTTAATAATCCGCCATCAACTACCCTCAATTTGGAGGAGTATGAACGTACGGGCCAGGCTAAGCCCATCGACCACGCCAACGCCACCACAACAGGCTATACGTGA
- Protein Sequence
- MSSTDVETFNGKIVYNLDGSSAYIIDADNANDNGSGETSKFREATASISVKKDFSNAKDFGFGEAKEKREQQEQKQQQQEQEQEQETLYKTSPRIHSFRVVTAQDANSNPTRDIIFKIQKPILMCFICKLSFGNVKSFSLHANTEHKLNLIELEQQLLKQEYSSAIIQRNMDEKPSISFLQPLDINAAGDVADEKNLHQISTDAVAPIPPETDQQEKENDKHDLCREQEPQNDPEIDHQSDHISNNQMAAPSAYYHHHQVKSSEKFGSLNSVTETTKTNKLLKVSVPSSSPSTSSGEVSSLSRTDNLSNNNNKSVESSFDVEMNPGSSSSPQRNELSEFPSSDFLAATAPGIFPPQVDSFHASLAALAANNTESNGNRVKLITEFLQQQLQQHQQQQHQSSLCPSQCPEHPDFNGVDCKTCEFLDIQGRTKSPSLPQLQVPPHRSPCSNLAMSPSSSSVTSVGNAGATSAGAATGATSSFTIGACSDHINGRPQGVDCARCEMLLNSARLNSGVQMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQNMVAAAVATGKLLLSSSSSSPQGAGSSNSVPPPVGSSSCLTSNNVGNPAISNNSNASSSTVASSSSNVNLKPKPSFRCDICSYETSVARNLRIHMTSEKHTHNMAVLQNNIKHIQTFNFLQQQQQQSSVSGAMSSSGVAGSFLPEVALADLAYNQALMIQLLHHQQQQQQSSANTKLSPTSSSPDPFNFSISPKPVAKMAHNQGLGLGLGMPIVGGMIESGGDSTGDLSQPISKPNEWPSALYSCLICDSFNTNNLDDLNQHLLVDRSRSQSTASSCSTDIMLIHNNNYICRLCNYKTNLKANFQLHSKTDKHLQKLSYINHIKEGGIRNEYKFQQHFQQQHTNVVHVKCNCCDFNTNSIQKLSLHTQQMRHDTMRMIFQHLLYIIQQSHLKKNDDDSCPDEDQNNKKHLVLLCQLCNFTAKNLNEMVQHVKSMRHMQVEQFVCLQRRSENKEIPALNDVFKITEWTYDNEDISYESGVNLTRSSTTATANEGSSLEATSCAVAAPTASLSSVAAEVSSSSSSAVVAGADVGIFSPTTTSPSSCSTSCGKTLGISVTSPTPTVNDFGLVLSAPSAAPTPTSVSVPAVSVPTTVFKCNLCEYFVQSKNEMETHIETEHPCADPSEDFISIPTNTAALQAFQTAVAAAAIAAVRQQRVNAIEAVTDIKREEVDEEEVEEVTKSIEVSEPVEKKIQAGIQCPLCLENHFREKTSLEMHLTSVHNVAKDGLFRLLMLIDPKVWEDNNNKCSNSSTEEATPTPEECSSSSSLAAVTTNVVGMNVLGCQKCNASFKHDEQLLQHAQQTQHFPIQNGEYLCLGLTHTTRPCYLRFRTLTVMINHFQDTHMSSVISERHVYKYRCKQCSLAFKTQEKLTTHMLYHTMRDATKCSHCQRNFRSTQALQKHMEQVHAGGDGVRSNSSPQAQSQSTSSTELSAEEAFAVKGEVASINDEITSPLLLENPQLLAKETSSRRQSPTASIPDSQTQQQYLATLTNLLKQQQCNSEVLGMQPEAMLPAGEFSQHLQSLQNLQTMQQQQQPFGAAINPVDMLNLMQFHHLMSLNFMNLAPPLVFGGSGGVGGAGVAGATHQNNSNLNSCSSSAADIQLINSGDSGKATAAVPALTQNNVANSSTQLTASNQKRARTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKPIDHANATTTGYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00593741;
- 90% Identity
- iTF_00593741;
- 80% Identity
- iTF_00593741;