Basic Information

Gene Symbol
hang
Assembly
GCA_008042675.1
Location
VNJU01004187.1:214284-227954[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.29 21 5.7 1.0 3 23 447 468 446 468 0.93
2 19 0.94 69 4.1 3.1 3 22 576 595 574 595 0.89
3 19 0.00063 0.046 14.1 3.3 1 22 710 731 710 733 0.90
4 19 0.073 5.3 7.6 0.1 2 21 745 764 744 765 0.93
5 19 0.00073 0.053 13.9 0.2 2 23 905 927 904 927 0.95
6 19 0.0021 0.15 12.5 0.1 1 23 935 958 935 958 0.96
7 19 1.7e-05 0.0012 19.0 0.1 2 23 1048 1069 1047 1069 0.97
8 19 0.0003 0.022 15.1 2.9 2 23 1161 1183 1160 1183 0.97
9 19 0.024 1.7 9.2 0.2 2 23 1192 1214 1191 1214 0.95
10 19 0.00058 0.042 14.2 0.1 1 23 1227 1250 1227 1250 0.97
11 19 0.00013 0.0096 16.3 1.1 1 23 1316 1338 1316 1338 0.99
12 19 0.002 0.15 12.5 0.9 1 23 1346 1369 1346 1369 0.96
13 19 0.8 58 4.3 0.3 2 19 1377 1394 1377 1395 0.93
14 19 3.4e-05 0.0025 18.1 1.4 3 23 1486 1506 1485 1506 0.98
15 19 0.0053 0.38 11.2 0.1 1 23 1541 1563 1541 1563 0.97
16 19 0.00062 0.045 14.1 0.6 2 23 1653 1675 1652 1675 0.93
17 19 0.58 42 4.8 0.1 2 20 1695 1713 1694 1715 0.91
18 19 0.0069 0.5 10.8 0.4 3 23 1730 1750 1730 1750 0.98
19 19 0.00011 0.0078 16.5 2.1 1 23 2078 2100 2078 2100 0.98

Sequence Information

Coding Sequence
ATGTGTGACGCTGCGGCAACAGCGTCGGAAACGGCGACCACAGCGCTGCTGGGAGGAGCCAGTGCAGTGACAGCtcctggagctggagcagctgccACCAGCACaaccacatccacatccacatcccaGCCAGAAGCCTCAGCttcggcaacaacaacgacaccACCAAccacgacgatgacgacggcGACAACGCCGCTGGCGACGAAGAGCGAGCGGGCGGCGCGACAAAACTGCTGTCGCCTGTGCATCGCTCCGGCCAGCGAGTGCATCTCGATCATCAACAGCTATGCGGCGGACAAGGAGCCGCTGTCCACCAAGATCCAAAACTGCGTCAGCATCAAGATCACCTCACAGGATCGCCTGTCGCTGCATATATGCCACGCCTGCATCAGCTACCTGAACTCGTGGCAGAGCTTCAAGAATCGCTGCCTCAGCTCACAGACAAAGCAGCGCCAGTGGCTGGACACCAGCAACAAGAGCAAGCTCTTCAACTACCTGGACCTGAACAGTGCCGAAAACGGTGGAGCCTCCACCgatcatcagcagcaacagcagcagccgcatcaACCGCAATCGGAGAATGAACTCGAGGCGGAGAAGGCGACAACAGCGGCCACAACGGCCGCCAACATATTGGATGGCATACCCTCGCTGAAGAAACGCAAATCCCTAACAGTCTATCCCAAACTGTACTTGCCACTGGATATAGCAGTGCCACCACTGCCACCGattgctgcttctgcttcggctcctgctgccgttcctcctgctgctgaacAGCCGCTGCTTTCGGGATTCTCCGCTCTAACCGGACTTGCTGCTCCTGGTGTGGGTGGTGGCGGTGGAATGGAGAGCTTGTCGTTGTCGCTGCCACTTGATTTCAGCcaaagctgcagcagcagcagcgttcACGTCCAACAGTCGGCTGTGCTGCCTATGGCCACGGCCACAGTTACGGCCACGGCTACGGCTACTACGGCTACGGCAACGTCTAATCCTGCCAATCCTTGTGGCTCTGGCATCCctgcatcagcatcagcatccgTGTCCACGGCTCCGCTGCTCATGCCGCCGCTGCCAGCGTTGCCCATCAAAGATGAGCCCATTGACACGGACGATGACTACCAGATGAAGATGATAGACGAGTCCGATGACATGGTCGATCCCACAATGTTCCTAGAGCGATCCGAGCACGAGGGCGATATGCCATTGATGGCCTCGGACTATGACTACACGGCCCAGCATGGCGTTAATGCCCATTCTCTGGCCGCCGCCGGACTGCCACCGAATGCGGTGGCCAATGTGGCCGCCGCTGGGGATTCCAAGGTGGCCAGCTGCCGGGCCTGCAGCCTGCAGTTCTCCACCCGGGCCAATGCCCGTCGTCATGAACGCAATTTGCATCCGAATCTCTTCCAGCTCTCCACGGACGCGCTGCACAATACAACAGTAACAAAGCCAACGCCCGCTCTGGCCGCCGCATTGGAAATCCAacgagcagcggcagcagcggccacCGCCGAGGCCAACCGTGCTGTGGGCGCTGCCGGCGGAAATATAACTCCCCAGAAATATCGTCAGGTGGTGATGAATGCGTTCATCAAATGCGAGGGCGGCGGCTACGACTATGACAATCCGGAGCAGTATCGTGCGCTGCTCACCCACGACAAGGTGGAGTTCATCGAACAGAACGAGGAGTTCCTCGAGCAGTACCAGACGATgacctgccgctgctgcagcaaGTACTTTAGCACGTACAAGAACTTTATGGCGCACGTGCGCAAAAAGTATCCGCTGCTGCCGCGCAATCTGTGCTTCAACTGCCTCAAGATGAACGACTCCAAAGCGCTCTTCATTTCGCATCTGAAGAAGCGCAACTGCATAAATCTGTACAGGATTTTGAATACGCTGCGCGGCAAGACACCGGTGCTTGCCACGGATGCGGGCGATGTGGAAATGGATGCAGCGGATGCAGCGGTGGCTGATGGTGCAGGAGGCACACCAATAGCTGTGGCAGATGCCGGTGCCGGCGTTGCCACAATGGCCAGTCCCACGGTCGGAGAGATGGGCACTCCCGGCGAGCGGCCAGAGAAGCTGCGCGCCAAGGAACTGCTCGTGAACAAGCTATACGAATGCAAGCTCTGCCCCAAGGGCTTCCGCACCAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAACTCGATACAGTGCAGCTTCTGCGGCCTGGACTTTGCCGATCCGGTGGACAGGCGTCGCCACTACAACAACATGGACTGCATTGTGCGGCTGCGTTGCATGACGTGCGACGCGAAGCTGGAGACGCATCAGCGTTTCCTCGATCATGTCTACCAGGATCATTTGGGCGGCGTcagcggcagtggcggcggcggcggcggcggcggtgccaGCAGTGATAATGCCTCCACAACGGGCAGCGGTCTGGCCAGGAGCAACAGCATGGAGCATTCGCCGGGCAAGAGGAGTCTGCTCGGTGCCCTGGGCATTGGCGTTGGTTCATCGGCGGAGGAATCGCGCAGCAGCAGTGTGGCGCCCACACAAACGTCCACGCCGAAACCAGCGGGAGGAGCGGCCACTGCGGCCTCCTCCGCGCCCAGTTCAGCGAATCGTGGTGATGCCGCGTCGGCTTCCGCACCCAAATCCCAGTACTTTTCGCGTATGCCCCAGGTGTGTCCCATTTGTGGGCAACAGTACAATAACTACAACAACGTGCTGCGACACATGGAATCAAAGCATCCCAATAAGCTGCCCGAGACATACAAATGCGTGCGCTGCGGTCTTGGGTATCCGCGCATCTCCTATCTGCGCGAGCACATGATCAATGTGCACGGCGTGGACAAGAATCGGCATTCGGGCGGCTTCGAGTACATCGTGAACGCCGATGCGGTTAAGCTGGCGGATGGCAGCACGCCGAATGTGTACACGGGTCGCTACGACTATGTGATGAAGGATCTGATGTCGATAACAAATGGTGGGACCCTCGATGAAGACGAGGACGAGGCAGCCGGCAGCGTGGCCAAAAAGATCCGCCTGGatgacagcagcaacaatagcagCTTGGCTGGCGttgccagcagccagcagcagcagcaaaaggagTGCCCCATCTGCAATGCTGTGTTCAGCAACAACATTGGCCTGTCCAATCACATGCGCTCCCATTACACAGCCGCCAGTGTGGTGACCGCAGCTCTGGCGGCCGCCAATCGCATGACACCCAAGTCACTGACCATAACAGCAGCAATGCCAGCGACAGTGGACGCAAGTCCAGaggcagcagcgacagcagcatCTACTGCCACGACACtggccgccagcagcagcagcagcagcaatgttGTGGTGCCGCCGGCGATGGCCAATCAAACGCCTCAGGAGCAGGCCGTATTCCGACGCAGTTTGGATCAGGCGGCCGACCGTCGCTTCCGGCGTATGCGTTGCCGCATTTGCCAGCGTCGCTTTAGCTCGAAGAAATCCTATCGCTATCACATGCTCACCGATCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAATGCGGAGTTTGCCTACGAGAAGGGTCTCAAAGTGCATCTGTTCAAGGTGCACGGACGGGCGATCAAGGACGAGATGATCATCAAGCAGTTTGAGTGCGAAGTCTGCTCGATTGTGTACAGCTCGGAggtggagctgcagcagcacaagCGAAGTGTTCACAAGTTAACTTCTGCTTCTGGTTCCGCTTCAGCTTCTGCTTCAGCTTCTGcttcagcctcagcctcagcatCAACTTCCTCTAAGATGGAGGATGATGTTGTGTTGGATGAAGAAGGCAAGCCAGCAGGTGGAGGCGATCAAGCTGATCTCTCCACCAATACCTCGGTTCTGGGAGTGGGTACGCCGCTGTACTGGTATCAGTGCAAGTACTGCCCCTCGAATTTCAATACCAACAAGAAGCTGGCCATTCACATCAACTCGCACGACGAGTTCGATTCGAATGATTATTCCTGCAAGGATTGCGGCAATGTGTACAGCGGACGCAAGAGTCTATGGGTTCATCGCTACAAGAAGCATCCCCAGGTGCCCGATCCGGCCGAGTGTTCGCTGTGCCGCAAGATCTTCTTCGATCGCCAGATGCTGGACAATCACACGCCCACCTGCAATCGCAAGCCCATTACCGCAACGGGTGCCCATCAGCAGCAGGATtcgctgcagcaacagcaggcggCACTGCAACGCGCCGTGTTCCGGCACAAGAcgggtgatgatgatgacgaggaAGAtgatggccagcagcagcagctggaagaGGGTGATAGCAATGGAGGCgcaacagcggcggcggcatcggGTAGCGCTGCtatggcagcggcggcggcagcagcagcttctaCTTTAAAGATACGCATACCGGAGGTGGCCTGCACCATTTGCGGGGCCCGATTCACCGATCAAGAGCACTTTAGCAAGCACATTCAGAAGCATGAACAAGAGCTATATGTGGATAATCCGCTGGCTGCGATGTTCGATGATGGACCGGCGGATGCCGGCCAGTTCCAGGTTGAGCGGCAGAACGAGAATGGGGAATATGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCACCAACAACAATCACActaccagcaacaacaacaacagcagcagcaacagcaacagccacagcaacagctcGATGCTGCACCTACGCGAGCTGCATGCAGTGGGCCTGATGcccaaccagcagcagcaacagcagcagcagagccacTCGAACAACATGAATcacagcggcggcagcagcagcagcaaatcgATGAAACGGAAACGTGAACTCAAATGCGAATACTGCGCCTCCACCTtcatcagcaacaacaatctGCGCCGTCACATGTACGAGCTGCACAAGCACGAGGTAAGCAATCTCCCCGAGCCGCCGGTGATCTTGGTGGACGAGCATCTTCAGTGTCGTCGCTGTCAGCTGAGTTTCGAGACCAAGGAACTGTGGATCGAGCACAAGCTGGCCGATGCCAAGGTGGTGCGTCCCTTCTGCCCGTTCCAGTGGGGCTGCGATCTGTGCGGCGAGTATTTGTCGCGCAAGGAGAAGCTAATGAATCACATCAACAATCATCTCAAGGAGGAGGTCATTGTGCCGGTGGCCACCAAGGCGGCCATTGAACGagaagcggcggcggcggcaacggtGGCAGCAGCTGCGAATGCAAAGGAATTGGCAGCAAACAATGAAGATCAAGATGGGGAGAATGATAAAAACAAAGATAAGGTGGCAGTGGGACAGAAAGGAGTTGAAAGCGATGACCTGGAGGATAGCTctggcgaggaggaggaaagtTCAGGCACGGGCGACGATgaggacgatgacgacgatgactctgatgatgatgatgacgaggaggaggaggatgatgaCGAGGGCGATGGAGGCGAAGGTGTAGATGAGGAGGGTGTGCAGCCCGGTCAGCTGCTGCCACAACAACAGcttcagcaacagcagccgcagccgcagcagcagcagcagcagcaacaggacgACGATGATCTTGTCGAGGAGGTCTTTAGCTCggaggaggatgatgatgatgaagagaGCGAGAATgaagatgacgacgacgatgtcGATGATGTGGAGGAACCGGAACCAGTGGCTGTGGCGGTGGCCTTGTCCCCATCGCAACCCCTGAtgaatggcaatggcaaagcCAAGTCAAAAATGCCGCCACTGATTATGCACAGTTccgaggatgatgatgacgaggaggatgatgatgatgatggcgttATGCCCATCGATGACATTATCGAAGAGGAAttcgacgaggaggaggaggaggatgccCTGCCAGATGCCGACATACAGGATGTGGATGATGCCATCGAGGAGGtggatgacgatgacgatttGGATGATGTGGaaatggaggaggagcacgaggaggatgaggaggaggtggtATTATCGGCAGCCTCTTCGTCAGAGAGCGAAACCACATCAACGACCACATCAAATTCGCGcacgcattcgcattcgcattcacaTGCCACGGGTGAGCGGCGTAAGAAGAGGGCTGACGATCAAATGAATGATCCCAGCTTTACCTGTGATCTATGTCAACTTTGTTTTGATTCCCAGGAGCTACTCCAGAGCCACATCAAAAGTCATTTTCTCAATGGGCCAAAGCTCAaagtggcagcaacagcagcaaccgccacaccagcagcagccgccacaacagcagcaacagcagccggcaGCGTGGCAATGGCAACGTCGCCGGCCAAGACGAAGCCTGACTCCAAGTCAGCGCTGCTGgtcaacaacaataacaacagcaataaGAGCAGCAAGACTGTTGCAGCTGCCACAAATTGA
Protein Sequence
MCDAAATASETATTALLGGASAVTAPGAGAAATSTTTSTSTSQPEASASATTTTPPTTTMTTATTPLATKSERAARQNCCRLCIAPASECISIINSYAADKEPLSTKIQNCVSIKITSQDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLDTSNKSKLFNYLDLNSAENGGASTDHQQQQQQPHQPQSENELEAEKATTAATTAANILDGIPSLKKRKSLTVYPKLYLPLDIAVPPLPPIAASASAPAAVPPAAEQPLLSGFSALTGLAAPGVGGGGGMESLSLSLPLDFSQSCSSSSVHVQQSAVLPMATATVTATATATTATATSNPANPCGSGIPASASASVSTAPLLMPPLPALPIKDEPIDTDDDYQMKMIDESDDMVDPTMFLERSEHEGDMPLMASDYDYTAQHGVNAHSLAAAGLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDALHNTTVTKPTPALAAALEIQRAAAAAATAEANRAVGAAGGNITPQKYRQVVMNAFIKCEGGGYDYDNPEQYRALLTHDKVEFIEQNEEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRILNTLRGKTPVLATDAGDVEMDAADAAVADGAGGTPIAVADAGAGVATMASPTVGEMGTPGERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSGSGGGGGGGGASSDNASTTGSGLARSNSMEHSPGKRSLLGALGIGVGSSAEESRSSSVAPTQTSTPKPAGGAATAASSAPSSANRGDAASASAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDEDEDEAAGSVAKKIRLDDSSNNSSLAGVASSQQQQQKECPICNAVFSNNIGLSNHMRSHYTAASVVTAALAAANRMTPKSLTITAAMPATVDASPEAAATAASTATTLAASSSSSSNVVVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSEVELQQHKRSVHKLTSASGSASASASASASASASASTSSKMEDDVVLDEEGKPAGGGDQADLSTNTSVLGVGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITATGAHQQQDSLQQQQAALQRAVFRHKTGDDDDEEDDGQQQQLEEGDSNGGATAAAASGSAAMAAAAAAAASTLKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTTNNNHTTSNNNNSSSNSNSHSNSSMLHLRELHAVGLMPNQQQQQQQQSHSNNMNHSGGSSSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVILVDEHLQCRRCQLSFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIEREAAAAATVAAAANAKELAANNEDQDGENDKNKDKVAVGQKGVESDDLEDSSGEEEESSGTGDDEDDDDDDSDDDDDEEEEDDDEGDGGEGVDEEGVQPGQLLPQQQLQQQQPQPQQQQQQQQDDDDLVEEVFSSEEDDDDEESENEDDDDDVDDVEEPEPVAVAVALSPSQPLMNGNGKAKSKMPPLIMHSSEDDDDEEDDDDDGVMPIDDIIEEEFDEEEEEDALPDADIQDVDDAIEEVDDDDDLDDVEMEEEHEEDEEEVVLSAASSSESETTSTTTSNSRTHSHSHSHATGERRKKRADDQMNDPSFTCDLCQLCFDSQELLQSHIKSHFLNGPKLKVAATAATATPAAAATTAATAAGSVAMATSPAKTKPDSKSALLVNNNNNSNKSSKTVAAATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00527463;
90% Identity
-
80% Identity
-