Basic Information

Gene Symbol
XBP1
Assembly
GCA_008042675.1
Location
VNJU01002916.1:36725-37714[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8e-16 7.9e-13 48.1 12.2 2 65 76 139 76 139 0.96
2 2 3.1e-05 0.03 14.2 4.7 26 65 114 153 113 158 0.93

Sequence Information

Coding Sequence
ATGGCCCCCACCGCGAACGCAGTGTTGATAACCGTTCCGCGAACATCCATTACATCGAATACGCTACCCAAGCTGCGCCCCGCCCCCCTGACGGCGGCTCTGCTCAAGGCCTCCTCGCCCACGCCCTCGAGCTCGGGCTACGCTTCCTCCTCGAACATGGAGGACGAGGCCCTGTCGACGGTGCCGCCCAAGGCCAAGAAGCGCCGCCTGGACCACCTCACCTGGGAGGAGAAGGTGCAGAGAAAGAAGCTGAAGAACCGAGTGGCCGCCCAAACTTCGCGCGACCGGAAGAAGGCTCGCATGGAGGAGATGGAGTACGAGATCAAAGAACTCACAGACAAGACGGAAATATTACAGAACAAGTGCGACAGTCTGCAGGCCATCAACGAGTCGCTATTGGCCAAGAACCACAAACTCGACTCTGAACTGGAGGTCATGCGCCAGGAGCTCGCCGagctgaagcagcagcagtacagAAGCATCGCCGCCACAAACAACCAGAGCACCAGCCAGTCCAACGCCAGCGCAGGCGTTGAGGGCTGTGCGTCCACAATCCTTGGATCTGCAGCATCCATTGCTGACCCTCTGCCGCAGGGTACACAACAGGTGGACACACAGTCGTCAGCGCGTGTGCTGGCGGAGCAGCTGAAGAGCTGCCGGAGCATGGCGTCACTCTGGAAGGTTGTTGCGCTATGCCTTCTCTACAAGACATGCTTGGCAACGACGAAGAATTCGACGTCAAGCGCCTCGAAGAGCTGGCCGAAAGTCTGCTCGCTGATATCACAGCAGACCTGGAAACAGGCGCTGGAGAGAGCAGCCCAGATGCTGCCCAAGATGCAGGCGAACCAGAGCGACTGTCTGGACCAATGGTGGGGTCCGCAGCAGAGCGCCTGGAATCCGACGGGCATAGAGCTGGTGGCCTAA
Protein Sequence
MAPTANAVLITVPRTSITSNTLPKLRPAPLTAALLKASSPTPSSSGYASSSNMEDEALSTVPPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTEILQNKCDSLQAINESLLAKNHKLDSELEVMRQELAELKQQQYRSIAATNNQSTSQSNASAGVEGCASTILGSAASIADPLPQGTQQVDTQSSARVLAEQLKSCRSMASLWKVVALCLLYKTCLATTKNSTSSASKSWPKVCSLISQQTWKQALERAAQMLPKMQANQSDCLDQWWGPQQSAWNPTGIELVA