Dsec007736.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila seclusa
Gene Symbol
srp
Assembly
GCA_035043575.1
Location
JAWNMX010000397.1:459487-472130[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-18 7.8e-15 54.1 2.0 1 35 905 938 905 939 0.97

Sequence Information

Coding Sequence
ATGACCAAGACCAGCAAGGCGAAGGAAAAGGTTAAGAGTGGTAGTACCGCAATGCCGCGCGTGCAGAGTAACTTACTGGCGAGTGCCGCCAAAATGAAGATCACCACAGCGCTGGCCAATGCCAAGAAGCAAGCAGTGCAAAAGAGCGCTGGCGACAAGGCAACAGGatcaaatgcagcaacaacaacaatagcagcagcagcaacatcagcttACACTCAACAGGCGGTCGCTGTGAAAGAGACGGCAATAGCGGCAGCGCAGGAGAACGGCGACGCTCaaaggcagcaagcagcgacgacgacgacgacgacgacgtcgccgTCAGcgtcatcgttgtcgttgtcgccgcTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCATACATCAGTTGCCAGCGAAACAGCGAAGCAAGCGGTTACcagcgcaacaacagcaacagcagcagcaacaattgcaaactCAACGATCGCTTTTGCTTATGATGAGAATAACGTAGCTTGTGACGTCACTAGCAAAATTGCAGACGAAACGGCTAATAACAATCCTCATAAAGTCGAGCTAAAAACCGAATGCGAAACGAAACTAGTTGAGAagacagcaacagaaacaacaacaacaacagccagcgataaatattacaaaatcgTTGATAAGAGTAAAAGTGAGATAAGTGATGAAAAcacaatagcaaaaacaacagcaacagcagctattTTGCCGGCTGTAGTGATAAATAGTAATCAGCAAAGTGAAAGtgttgaaaacaaaatcaaaaCCAACTAcgcacatcagcagcagcaacaggcagaacaacagcatcagcaacaaatttacgagcagcaacagtatctgcaacagcaattgctaagccaacagcagcaacaacaacagcagcaacagcaacaagagcaacacgCCAGCTGGTTGGCCTACAACAATTGCGCTTACGATTTAActagcggcagcagcagtgcagcaacagcagcagcagccgcggcagccgcagcagcagcaacacaacagGATAAAAGTGAATTGTATGCACTGGCTGCCTCACAGCAACTTTTGGCTCATTTTCCCTATCACAATCATCCCCACGCACTTTTGtacgagcagcaacagcagcaacaaccgcacagtgccaacagcaacagcagcacggAACCCATAATGCGCAATAACTTTACGTTGTACAGCGTATATGGcggtggaggaggaggtggtggCGTTGGTAGCGCCATCACACCCACCACAcacgagcaacagcaaatgcagcaacatgttgccgctgtggcaacagcagcagcagccaattcAGTCATCGCGCACACAACGCACGCCCAAACGCCCAACATCGATGAGGTCATTCAGGATACGCTGAAGGACGAGTGCTTCGAGGAGAATCATGGCACCAGCTATCATATGCTGACCGCAGTCTCCGATATGCATGTGTTGAAGGACGCAAATGCAACCATTTACTCCATGTCGCACGatcagttgctgcaacagcaccagcagcaacagcagcagcaccatcaacagcaactgcaacatcatcatcatttgcagcagcaacattcgCATCATCattcgcagcagcaacaccagaacaacaacaattcggcCAGTTCGGTGGGCGGTGACTCGCCATCGCCTTCGCACACGCTCGCCGCAACTGCCGCCGCCCATGCGAGCGATGTGGCAACGCTGCAGAGCTTTACCCAATTAACAAGTGCACCACCCAGCAGCGTTTTGCATCGCGATAGTTATGGCAGCCTCTCGCCGGGAAGCTATTTCAGCACACAGCTCAGCCCAGTGCTGCAGAGCAGctcTGTCTATGCAAGTCCTTTGCTCGCATCGACCGCCAATGGCTTGCAGTATGGCATGCCAACGGTGTCCTcgcccacccacacacacacccagctgcagcagcaacatcaccaacagcagcagcagcagcagcagcaacatcatcagcatcacAATTCGACGAGCAGCAGTCCTGGTCCAGTGGGTCAGCTCCACACTAGTGGCTCGACGGCGGCTGGTCATAGCTCGCTGCTGGACGATGGCTATGGATCGCCAAAGAGTAGTCACAGTGGCAACGGCGGCGcaagtggtggtggtggcaccCTGCCAGGCTTCCAGCGCATTGCGCCGACCAGCGGTGCTGCTGGCTATGGCAGTGGCGTGGCCAATGGCTCTGGCAGTGGTGCCGAACGTGCTGGCTACGCATCGCTGCCCAATTACCGCACACACGGCGATGGCTGGAGTGGTCATTATGAACAAATGAGCTATGTGCCCAGTGCCAACAGCCAAGGTCAGTTGGGTGGCAACGCTGGCGGTGCAGCGGTTACAAATGTGATACGCAATGGAcgtgttgttgccgctgcagcagccgccactGCTGTCGGCACCATCGCCAACGATCCTGTCGATCCTGCGCGAGCATTCCTCGCATCGGCATCGCTAACAGCATTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAACGTGAACGCCGGTAGCCGCATTAAGGCCACAATAAATGCCAACAGCGCTGCCGGTGCCGGCGCAGGCTCAACGTCAGCGACAACGTCGTCAGTGACTTCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCTCGACGTGCTGGCATGTTATGTTCCAATTGCCAGACGAGTTACACATCGCTGTGGCGCCGCAATCCTGGCGGAGAGCCCGTCTGCAATGCCTGTGGCCTCTACTTCAAGCTGCACAATGTGGTCCGTCCTCTGACCATGAAGAAGGACACCATTCAGAAACGCAAACGTAAACCGAAGGGCACCAAGAGTGAAAAGTCGAAAAAGGTGCGATCCTCGCAGACGGCAGCCTTGGTGGCCACAAATGCCAATGCCTGCCACAATGTgaacatgcaacagcaaatgtcAGATGTCAATGATGAAATGAAACCACTCGCATATATGTCATACGcatcgcagcaacagcaacagctacagcagcaacagcaactaaacaTTGAGCAACATTCATCAGCGGCCAGCTCGCCGCAAAGCATGGGTTCCTCCTCATTATCACCCAATGCAGCatctcaacaacagcagcagcagcagcagcagcaacagcaacagctttgTGCTGGCCTGGACATGTCACCCACATCCTCCTATCAAATGTCGCCTATtaacatgcagcagcagcagcaatcatgcagcatgcagcattcACCTAGCACGCCCACATCAGCCATGTCACACTCCATTTATTCCACACCATCGCCAACGCagcttaacaacaacaattcactATTTaatcacaacaataataacaatgagaATAACAAGCAAATTATACAGAAATATCTACAAGCTCAACCATTGCGCAACACCAACGATCAACAATTAttggcacagcagcaacttaTGCACCTGATGCCGAACTCCATtacggcagcagctgcggcagcagcagcagcagcggcggcggccaTGAACACGGCAATCAAATCGGAGTCGggctccaacaacaacagcaacaccagcagcagcagcaacagcaagcaattaggtgccacaacaacagcaacaacaccgaCCACGGCATCGAGCACACTATCCTCACTGAGTCTCAACCGCAGCAACATTATCAGTCTGCAAAATCCCTATCAACAGCTTGGTCAGACGGAGATGCCCTTGTGTAAATCGGCGCTCAGCGGACGCACCTCATCCCCATACTACCATCTAGCCGAGGAGGAGCAACCGGCCATTGTAAAACTGGAGCAATTGGatcaccaacagcagcagcaacaccagcagcaacagcatcaacaacaacagcagcaacatgatgAAATGTTGCTAAGTCGCTCAACGTCAATCGATGAGCACTACGAACTGGCAGCCTATcatcgccagcagcagctgcagcagcaacacaatctacagcagcagcacgatcAACAGATTGCCAGCTATGCATTACAAGCcgctgcacagcagcaactgcacgAATTTGAACGCAAATATGGCGTTGAGCGCGAGACACTTGTTAAAATGGAGTAA
Protein Sequence
MTKTSKAKEKVKSGSTAMPRVQSNLLASAAKMKITTALANAKKQAVQKSAGDKATGSNAATTTIAAAATSAYTQQAVAVKETAIAAAQENGDAQRQQAATTTTTTTSPSASSLSLSPLATANLSSTFESKAHTSVASETAKQAVTSATTATAAATIANSTIAFAYDENNVACDVTSKIADETANNNPHKVELKTECETKLVEKTATETTTTTASDKYYKIVDKSKSEISDENTIAKTTATAAILPAVVINSNQQSESVENKIKTNYAHQQQQQAEQQHQQQIYEQQQYLQQQLLSQQQQQQQQQQQQEQHASWLAYNNCAYDLTSGSSSAATAAAAAAAAAAATQQDKSELYALAASQQLLAHFPYHNHPHALLYEQQQQQQPHSANSNSSTEPIMRNNFTLYSVYGGGGGGGGVGSAITPTTHEQQQMQQHVAAVATAAAANSVIAHTTHAQTPNIDEVIQDTLKDECFEENHGTSYHMLTAVSDMHVLKDANATIYSMSHDQLLQQHQQQQQQHHQQQLQHHHHLQQQHSHHHSQQQHQNNNNSASSVGGDSPSPSHTLAATAAAHASDVATLQSFTQLTSAPPSSVLHRDSYGSLSPGSYFSTQLSPVLQSSSVYASPLLASTANGLQYGMPTVSSPTHTHTQLQQQHHQQQQQQQQQHHQHHNSTSSSPGPVGQLHTSGSTAAGHSSLLDDGYGSPKSSHSGNGGASGGGGTLPGFQRIAPTSGAAGYGSGVANGSGSGAERAGYASLPNYRTHGDGWSGHYEQMSYVPSANSQGQLGGNAGGAAVTNVIRNGRVVAAAAAATAVGTIANDPVDPARAFLASASLTALAAESGGDFYKTFPFNVNAGSRIKATINANSAAGAGAGSTSATTSSVTSTALDEHVSRANSRRLSASRRAGMLCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKVRSSQTAALVATNANACHNVNMQQQMSDVNDEMKPLAYMSYASQQQQQLQQQQQLNIEQHSSAASSPQSMGSSSLSPNAASQQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQSCSMQHSPSTPTSAMSHSIYSTPSPTQLNNNNSLFNHNNNNNENNKQIIQKYLQAQPLRNTNDQQLLAQQQLMHLMPNSITAAAAAAAAAAAAAMNTAIKSESGSNNNSNTSSSSNSKQLGATTTATTPTTASSTLSSLSLNRSNIISLQNPYQQLGQTEMPLCKSALSGRTSSPYYHLAEEEQPAIVKLEQLDHQQQQQHQQQQHQQQQQQHDEMLLSRSTSIDEHYELAAYHRQQQLQQQHNLQQQHDQQIASYALQAAAQQQLHEFERKYGVERETLVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00596315;
90% Identity
iTF_00495521; iTF_00528452; iTF_00497802; iTF_00497036; iTF_00597808; iTF_00559149; iTF_00521811; iTF_00482644; iTF_00607477; iTF_00560696; iTF_00620249; iTF_00567195; iTF_00610301; iTF_00574463;
80% Identity
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