Basic Information

Insect: Drosophila seclusa
Gene Symbol: salm
Assembly: GCA_035043575.1
Location: JAWNMX010000517.1:420370-431485[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.3e-06 0.00034 20.9 0.9 1 23 521 543 521 543 0.98

2 7 1.1e-05 0.00067 19.9 2.1 1 23 549 571 549 571 0.98

3 7 0.018 1.1 9.8 1.5 2 23 977 998 976 998 0.98

4 7 7.6e-08 4.8e-06 26.7 0.5 1 23 1004 1026 1004 1026 0.98

5 7 0.00023 0.015 15.7 2.3 1 23 1036 1058 1036 1058 0.98

6 7 0.031 2 9.0 2.9 2 23 1476 1497 1475 1497 0.97

7 7 3e-08 1.9e-06 28.0 1.3 1 23 1503 1525 1503 1525 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.3e-06	0.00034	20.9	0.9	1	23	521	543	521	543	0.98
2	7	1.1e-05	0.00067	19.9	2.1	1	23	549	571	549	571	0.98
3	7	0.018	1.1	9.8	1.5	2	23	977	998	976	998	0.98
4	7	7.6e-08	4.8e-06	26.7	0.5	1	23	1004	1026	1004	1026	0.98
5	7	0.00023	0.015	15.7	2.3	1	23	1036	1058	1036	1058	0.98
6	7	0.031	2	9.0	2.9	2	23	1476	1497	1475	1497	0.97
7	7	3e-08	1.9e-06	28.0	1.3	1	23	1503	1525	1503	1525	0.99

Sequence Information

Coding Sequence: ATGAAAAATCACTTGCAAAACGTTCTGTGTGCAATGCGTAGTGACTTCAAGGATAATCACCAGGagaccataaataaaatgatacaATTTGGTACCGTTAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCCAGAAGCGCCGAAAAAGACATCGCAAGTGATCAGGAAGATAATGGCGCCTGCTCGCCGCTGACAACGGCGACACCGGCCAGCGCCAGTGCTGGGAACAGTCCCTGCCCCAGCCGCAGTCCGCGGCGccacagcgacgacgacgacgagttGGCTGGCGAGAGGGATTTACTGCAAGTTGCCGATAATAAGGAGGATACAAAGGATAAACAGGATAAGCCGGATAAGCTGAAGGAGAGCGTGGAGAGTGTGGAGCAAGTCTATAGCCGGACCGATGCGACTATCGAGGatcacaatcacaacaacagcagcagcaacaaccacaacaataacaacgatagcgataacgataacgataacgataacaagAAAGTCAAGGTCATGACAAAACCGCCCGAGGAACACGAGACGAACGCGAACGCGAACTCAAACTCATCGTTGCCGAATTCACCCACCGCCGCCACATCCAGCATGGAGGCGCCACCAAAGCAactggatgtggatgtggagaTGCCGCAGGCGGAGCACGAGAAGAGTCCAGCGACGCCGCCGCCGGTcagcaatgcaacagcagcaacagccacagcagcagcagccgctgcagccgcCCAACAATTTGGGGCAACACCCGTCACCCTAGAGGCGATTCAAAACATGCAAATGGCAATCGCCCAGTTTGCGGCCAAGACCATTGCGAATGGCGCCTCCGGTGCGGACAACGAGGCGGCCATGAAGCAGCTGGCCTTCCTCCAGCAAACGCTCTtcaatctgcagcagcagcaactctttCAGATTCAGCTCATCCAGCAGCTGCAATCGCAGCTGGCGCTCAACCAGGTAAAGCACAGCAACGAGGACGACGCTGACGAGGATGCGGAGCCCGAGGAGCGGGAGGATGGCGAAACGGACACctacgaggaggaggagcgcaTTGCTGACATGGAGTTGCGACTGAAAGCCGAGGCTCGCATGGCCGAGTCCAAGGCGCGCCAGCATCTCATTAATGCGGGAGTTCCGCTGCGCGAACGTTCCCATTCTCGTTCCcattcccgttcccgttccgcCTCCCCCTCGCCCAGTCCCTCGTCGCCGGCTGTCTCCCTGAAGCGCAAGCGGGACGAAGATGCCGGCGCTAAGCCTGCTGGTGCCAGGAGCTTTGGCCAGCCGGTGGAGAGCGCACAGGATGCGCTGTCCAAGCTGAAGGAGATGGAGAATATGCCACTGCCCTTTGGCAACGATTTGGCATCCAGCATCATAACGCATCACGATGATCTGCCAGAGCCGAACTCCCTGGATCTGCTGCAGAAACGGGCGCAGGAGGTGCTCGATTCGGCCTCGCAGGGCATCCTGGCCAACAACATGGCCGATGACTTTGCGTTCGGGGACAAGTGCGGCGAGGGCAAGGGACGCAACGAGCCCTTCTTCAAGCATCGCTGCCGGTATTGCGGAAAGGTCTTTGGCTCCGACTCGGCGCTGCAGATCCACATACGATCTCATACGGGGGAGCGACCCTTCAAGTGCAACGTCTGCGGCAGTCGTTTTACCACAAAAGGCAACCTGAAGGTCCACTTTCAGCGCCACGCCCAGAAGTTTCCGCATGTGCCGATGAATGCGACACCGATACCCGAGCACATGGACAAGTTTCATCCGCCGCTGTTGGATCAAATGTCGCCGGACAGTTCACCCACCCAATCGCCAGCGCCGGCATCCGGCCAGGCGCCGGCCAGCTCAACGTCCGCTCATCCGCCAGCGATGTCCTTCCCCGGCCTGCAGGGCCTCTATCGTCCGCCCATGGAGCTGCTGAAGTCCctgggagcagcagctggcagcacgGCCGGACTGCCGCATCCCTTTTTCCCTCAGATGCCGGGACTGGGCGCGGCTCTGAAacacagccagcaacagcagcaacagcagcagcagcaggttaGTCAGGATTTGCCCACAGACTTGCGCAAGTCTTCTGGGCCCAGTTCACCacacgaggaggaggaagatgatgatgacgatatGGCTGCTGTGCGGCTGCCCGTCAAGGCGGAACTGCTCGAGGAGGAGAAGGCGGAGCCGGAGACGGCAGCGTCGTCTGCCGAATGCGCTGACTtggagccagagccagagccgcTGCCGCTGGAGGTGCGCATCAAGGAGGAACGTGTCgatgaggagcaggaggaggagcagcagcgggagcagcagcGGGAACAACACGAAACATCCTCCAATCGCCGCACACCAACATCTTCGCCCACGAACCCAGTGCCTGCGACTCCGCCAATAATGCAgcgacatcatcatcatcatcagcaccatcagcaccatcatcatcatcagcagcatcatcagcagcatcatcagcatcatcagcatcatcatcatgccTCACACATGCCTGGTTATCCGCCAGTGGTACAACCGATTCAACCACCAGCCATAATGCACGCCCAGTGCTCGCCCGGCTCCCATTCGCATCTGGATCAGCTGCCGACTCCTGGCCAATTGCCGCCAACTATGCCGCATCGCGAGGACTTTTTTGCCGAGCGATTCCCCCTCAACTTCACCACAAAGACACTCTCCCCTGAGCACCATTCGCCGATCCGTTCGCCAGCTGGCCATGCTCACGCCCACATTCCGCGCTCGCCCTTCTTCAATCCGATCAAGCATGAGATGGCGGcgctgctgccacgcccccacagcaacgacaactCGTGGGAGAACTTCATCGAGGTGTCGAACACATCGGAGACGATGAAGCTCAAGGAGCTGATGAAGAACAAGAAGATCAGCGATCCCAATCAGTGCGTCGTCTGCGATCGCGTCCTCTCCTGCAAGAGCGCCCTCCAGATGCACTATCGCACCCATACGGGCGAGCGGCCCTTCAAGTGTCGCATCTGCGGACGCGCCTTCACCACCAAGGGCAACCTGAAGACGCACATGGCTGTGCACAAGATTCGTCCGCCGATGCGCAACTTCCATCAGTGTCCCGTCTGCCACAAGAAGTACTCCAATGCGCTGGTACTCCAGCAGCACATCCGGCTGCACACGGGCGAGCCAACGGATTTGACGCCCGAGCAGATTCAGGCGGCCGAGATACGTGATCCGCCGCCCTCCATGATGCCTGGACACTTTATGAATCCTTTCGCGGCGGCTGCTTTCCATTTTGGTGCCATGCCTGGCGGTGGACCGGGCAGCCATAATCCGGGCGCGGCAGCTGCTGGAATGTCGGGTGCGGCACACAATGGCGCCTTGGGCTCGGAATCGTCGCAGGGTGATCTCGACGACAACATGGACtgtggcgatggcgatgattTCGATGACGCTTCCTCCGATCATCTCTCCAATGATCCGGCGTTGGGCGACGAACGTCCGCGTTCCGGCGACGACTTCAAGTCGCTGCTCTTTGAGCAGAAGCTGCGCATCGATGCCACCGGAGTGGTCAACATCAATAGTCATCATCCGCAtccacattcgcattcgcatccaCTTCATCAGCATGCGCGTCCTCGTTCCGCGGCCAGCAATCCCAATTCGATTGGCTCCGCTTCCGCCTCACCCTCCGCGCCTGCCAGTCCCAGCTCTCAGCCCAAGCGGAGCTGCTCGCCGGTGCGATCCGTCTCGGAGGCATCGCAGGGTGCGCTCGACTTGACGCCTcgtgccgttgctgctgctccgtcGCAGCCGCTTGCCTCCCCGCCCAAGGAGAAGACGGTGAGTCCGCTCAGCCAGCAGTCGACGCCTGCACGCAGTCCCAATGCCTCCGCCTCCGTCTCCGCCTCTGCCTCCGTCGCTGCCTCGCAGCTGCTCTCCTCGCAGCTGGCGCCGTCTGTGGGCATTGATTGCCTGCCGCCCGGTTTGCAGcatcatctgcagcagcagcatcagcatctgaTGCAGCAACAGGCGgcggtggcagctgcagcggctgccCAACACCATCACCATCAGATGCAACAGCATGCGGCCGCACTGCATCAGCATCAGGAGCAACTGCGTCGCGAGGCACAGGAAGTGCAACAGaaagcggcagctgctgcagcagcggctgctgcccAGCGTCAGACATCGCCACAGCCACCGACGCGTGCCGGCGAATCACCTGGCGGTCCGCCCGTTGGTGGGCAGCCCAATCCGTTGATCGGCGCCCGGCCGCCCTTCGGCATGTTCCCCAATCTGCCCATCTTCCCGCCGGCCACCACGCAAAACATGTGCAATGCCATGAATCAGATTGCCCAATCGGTGATGCCAGCGGCACCATTCAATCCGCTGGCATTGAGCGGGGTGCGGGGCAGCACCACCTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTCGAGATTCACTACAGGAGCCACACCAAGGAGCGCCCCTTCAAGTGCAACATCTGCGATCGCGGCTTCACAACTAAGgGCAACCTCAAGCAGCACATGCTGACACACAAGATCCGCGACATGGAGCAGGAGACCTTCAGGAATCGAGCTGTAAAGTATATGAACGAGTGGAGCGATGAACGCGAGTAA
Protein Sequence: MKNHLQNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSAEKDIASDQEDNGACSPLTTATPASASAGNSPCPSRSPRRHSDDDDELAGERDLLQVADNKEDTKDKQDKPDKLKESVESVEQVYSRTDATIEDHNHNNSSSNNHNNNNDSDNDNDNDNKKVKVMTKPPEEHETNANANSNSSLPNSPTAATSSMEAPPKQLDVDVEMPQAEHEKSPATPPPVSNATAATATAAAAAAAAQQFGATPVTLEAIQNMQMAIAQFAAKTIANGASGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQVKHSNEDDADEDAEPEEREDGETDTYEEEERIADMELRLKAEARMAESKARQHLINAGVPLRERSHSRSHSRSRSASPSPSPSSPAVSLKRKRDEDAGAKPAGARSFGQPVESAQDALSKLKEMENMPLPFGNDLASSIITHHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADDFAFGDKCGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTQSPAPASGQAPASSTSAHPPAMSFPGLQGLYRPPMELLKSLGAAAGSTAGLPHPFFPQMPGLGAALKHSQQQQQQQQQQVSQDLPTDLRKSSGPSSPHEEEEDDDDDMAAVRLPVKAELLEEEKAEPETAASSAECADLEPEPEPLPLEVRIKEERVDEEQEEEQQREQQREQHETSSNRRTPTSSPTNPVPATPPIMQRHHHHHQHHQHHHHHQQHHQQHHQHHQHHHHASHMPGYPPVVQPIQPPAIMHAQCSPGSHSHLDQLPTPGQLPPTMPHREDFFAERFPLNFTTKTLSPEHHSPIRSPAGHAHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGSHNPGAAAAGMSGAAHNGALGSESSQGDLDDNMDCGDGDDFDDASSDHLSNDPALGDERPRSGDDFKSLLFEQKLRIDATGVVNINSHHPHPHSHSHPLHQHARPRSAASNPNSIGSASASPSAPASPSSQPKRSCSPVRSVSEASQGALDLTPRAVAAAPSQPLASPPKEKTVSPLSQQSTPARSPNASASVSASASVAASQLLSSQLAPSVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAAALHQHQEQLRREAQEVQQKAAAAAAAAAAQRQTSPQPPTRAGESPGGPPVGGQPNPLIGARPPFGMFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDERE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00499142;
90% Identity: iTF_00528350;
80% Identity: -