Basic Information

Insect: Drosophila seclusa
Gene Symbol: JARID2
Assembly: GCA_035043575.1
Location: JAWNMX010000629.1:4649236-4657915[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.7e-22 1.4e-18 67.0 0.0 6 89 2066 2147 2061 2147 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.7e-22	1.4e-18	67.0	0.0	6	89	2066	2147	2061	2147	0.92

Sequence Information

Coding Sequence: ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGTAAGGAAACAGATACGCCGCCAACGTCATCGTCCGCGGcgtcggcggcggcagcagcagcaacactggcTGTGGAGTCATCACCCGAGATGCCTAAAAGAACGAAGGTGCAGGCACAGCGTAAATTCGCCCAAGGCCAGAGTGCGCCCAATTCAGCCGGCGGTGGTGCATTTAACGTTGCCAGCGTtgtagcagcagcggcggcagcagctgtagGAACTGCATCGGGCTCCTCATCGTCTGCTGGACCAAGCACATCGACAGCAGACagcctgcagcagcaacagccacctATTGAGATATTGCCGAATCAGCGCCCAATGCCGCAGGATTTTCTAACGTTTCTCTGCTTTCGCAGTTTTCAGGGCAAGCCCAAGGCCAATGATGCAGGTGTTCTTCCGCCCAGCAGAGATGctgtgaacaacaacaacacaaccaccaacaacaagaagaacaacagcagcagcagcaaaaagaaacgTGGCCGACCAGCCAAAAAACCAGGCACTGAGCAGATGCCAACAACGACTAAAACAGCTAGTGATAAAATtgaagcagcagcgacgcccaCGCCTCCTCCGCCCTCTCAATCTCAGCCCCAgcctctgctgctggctggaGCAGTGCGTAAGCGTGCCGAGGTTGTTGCCGAGGGCAATCGACGAGGCGGACGACGTCAGGAGACTTTAAAGCGACGCTCAAATCGCGCCGGCAACAAGGAAAAAGATGATGAACcggatcagcagcagcagcagccggcgcagcagcagcaacagccggcgcagcagcagcagagtaaCTCTGACGCAGTCCATGtcgaggaggaggcggaggatgatgaggaggatgaATTCTTTTCGGCGCATGATGCCAGCTCGCGTAATGGTATCGCCTCCGCCGTCGCCGATGAGACGCTCTGCAAGTCGGAGATAATGCAATCAAATACAAGACGTGGTCGTGGCAGAAAATCTGttgtggcagcggcagcagactCACCTGTTGCAGTCAACGAGAGCAGGGCCAGcaaagagaaggagaaggCGCCCGTGAAGCGTTTGCGTCAACAGCGTGAATCACCCATTTTTATCCCCTCCCCCGAATCATCGGGACGCATGACGCGACAGCGTGCTTTTTTTGAGCCAGTCAAGGTGCCGCCAAAGCAAGAGCCGTCAGAAGTGGAGGAGAAGcacgaggaggagcaggaggtcaaggaacaaaaaaagaacaaggAAAAGGAGCAGCttaagcaggagcagctgcagctgcagaagcagtcagcggcatcagcagcagcagtcgagcccaagcagcagcagcacatcaaGGAGAAAATCAACTCAAGCATTTATGCCAAAGATGCGGCCAAGCTAGAGAATGGTGTCACCACAGCgacagctgctgcggcagcggaGCAACAAAAGGGTCTCAATGTCTTCGATTTCAGCTCCGATGATGAGCAGCCGCTGGCCAAGGCCATCAAGCTAAAAAAGGGCGGCAAAAAGGCGGCAGTGGGAGCGGGAGGAGGAGCGggagcaattgcagcagcagctggaacgGCAAATGCACGCGGTCGCAAATCAGCCGCCAGCGGATCGgcaaaaaagcagcagcggctggaggaaaaggaaaaggcagcagtagcagctacTCCGCCTGAAGagttgccaaaaacaaagcgtGGCAAGCCATTAAAAAAGAAAGCCGCCGAGCCGGAAAACGACGAGCAGGGGGTGGATGCCGAGGAGTCCGATTTATGTCCACCCTCGcccaaaaagccaacaaacaacaataatgcacGTCCTGTGCGTCGTCTGGCGGCACAGCTGAAATTACAGCAACGCTCGCGAAGTCCAagtccgcagcagcagcgcagtcaGCGTCCGTCGCGTAAGACGAAAGAAGCGGCTGCCATCTACATGGGCATCATTGGGCATAAGTTGCAGTTGGCGGATGACGAGGACGATGATCTGTCGCTGAGCAGCTTTCCCGATATACCCAATGTCAAGCAGATGGAGAAAATGGAGAAGGAGATTAAAAAGAATGCGGCAGGCAAACAGGCAACAAGCaaaccaccagcaacagcagtagcagcaacgacgacaagagcagcaacaacagaagcagcagaagtagcaggagcagtaggatcagctgctgctgctgctgcaattgaagCGACAACTgaaacggcagcagcagcgccgccgcCACCTCCACCTGCTCCACGACGCGGTCGACCGCCCAAGCAGGCAAAAGcagcagctgcaggcacAGTCAAGCCTCAAATAGAGGGCATGCTGGTAAAGAAAGGCGCACTGGCGCTGGCTAAAGCAAAGTccgaacagcaacaaaaaaaccaacaagaacaacaacagcagcagcagcaacaacaaaaagtcgaCTCCGATGCCGAGGAGGATTTTTTAATCAACGAGGAGCTAAACGAAACGAAGCGCAAGCTCGAAAAGAGTTTCAGTGACTCGGATGATGAGCCGCTGGCAATTAAagtgccaacagcaacagcagctgcagcagcagcagcagcaacagttgcagcagcgacaacagcagcagcagcaacaaccacaacaacaactgttgcagcagcaacaacaaacacagctaaagccagcaacagcagcagcaaaacggaaacagcagcaacaactgtgaCTCAAACAACgtcagcaacaactgcagtagctgcagcaacagttgcagccaAAACTACACCaactgcggcagcagcaacgactacagcaacagcagcaacaactacagcaacaactacagcagcagcaaccactacagcaacagcagcaacaactacagcagcagcagcaacaacaacaacaacaacaacaactgcaccagcatcagcagttACTTTAAAGCCACCACAACTGGGCGTTGCAACAGCCACGCCCATAACGCCATTAACCATGTTGCCGCTGACGGCAAAGCCCAGTCCATTTACAATATCACCACCGAGCTATGCATCCGCAGCAGCCACACTAAAAGCAATGGAAAAGAAATCACCCGTGCCCACCTCGAAGATATTGAATGTGCCTGCCACATATGCGTTGCCCGGCAGCGGAACAATTGGCATGGGCGTGGGTGCCGTTGGCTTTGGGAAGAGCACATCGTATTTGCCGCAGGCATCGCCACACTATCAATCCCCGTATGTGCGTCCGCCTACGTTTTGTGCCGCTGCAGGTGCGGCTGTTGCCATTGGCAATAAGACTCCgcatccgcagcagcaacagttactGGCAGCGACAGCGGGGGCAACAAGCACAGCCCAGCAGACGTCGACACCACTCAAATATCAAACGGCGCCCACTATTTATCCGCCACCCATTGAGGCGTATCAGTGTCCCAAAATCAATCCCAACTTTCTAACGCCCAAATATGATCGAGCGAGCATATTGCCGCGtgtcaataacaataataatgcgGTGACAATTAGCAATACGAGCGCCAGCAATTTTACGGCACCAACAATTGCAAGGCCAACGCTGAGCACACTGACCACGCCCACCACACCCGCTCCTGTTATATCTACGACctctgcaactgttgcaacaaaagcaacgacTGCCGTTAGCCAAAGTCTTAGTTTGACCATAACTGCAACGCCGCCAGCTGTGGCatccacatcagcagcagcggcagcacaacagcaacaacaatcacaacagcaacaacagcagcagtcgcaacaacagcaatcacaacagcagatgcagcagcaacaacagcagcaacagccacatccacaacaacaatcgccAGCGTTGACAATGACGCCAACGACAAGCACCAATAACAATTCGGATCCGTTGAAAGATGAGATTGGTAGCATTTTGGCGCAGGCAACACTCATGCCCAGCAAGGAGGAGTCGGGCAAGATCTTTGGCATTGCCAGCGTGAGTCTGGCACAAAGTTCCGGGCCGGATAATACCAAATGTACGCTCGGAAAATGTGGATCGATACACAAACCGGTGCTGGGACCTGTTGTGCCCACAGAGGCCTACTTTGGCGATCAGTTGTCGGGCAAGGAGCGTCGCAAGGCCAAGGTGAATATGACACATGAACAgatccaaaagtggctcatcGAGTGCAGCTCGAATCCCGATGAGATACAGGATGATCTCGATGATGAGTACGACGACAGTTTGAGGCCGCAACAGTCACAAACGCCGCCGGGTCCGACGCGTGACGATAAGGAGAGCACAAGCTTCAGCAGCTCCTCGAAGAATACGCGTGGCGAGCTCGGCAAAAGTGAGAGTGCCTGGTCCGCCAAGGGGCCATCCCTGAAAGCGACACCGGTCCTCGTCAgcgcagcggcggcggcaacagcagcagctgcagcagcagcagccaatctGCGTGATATGGACACAGAATCGGATACCATGGACTTTGATAAGTGTGTGACGCCAGTGAATCTCACCCAGAAAAAGGAGATCTCGGCTGCCTCAGCAgtcgccaacagcagcagtgatAAAAGGAAGCCGAAGAATGCGGTcaaagcaacagctgctgctgcagctggcagcaacaataagcgaggtggtggagcagcagctgctgccaacaaaCGTCTTGCGGCTGCCACAAAGCTGTCGACGCCAACgcccaccaacagcagcagcaatacgcCCACTTcggcaatggcaacgacaacaacactgacaacaacatcaatgtCAGCCAAACGGACACCCATCTATCAGAGCAGTCCAAGCAAAGCCAAactggacaacaacaacaagaagcagcagcagcagcaaaagttgccAATTAAAACTTCAGTTTATGCCTTTGGCAAGGAAGaggagacaacaacaacaacggcaaatgtaaagaaaacagcagcaacagcaagtgttgctgctgcagctgctgccggcaAGGCGACAAATCGTCGCCGCAATCTTGAAGtcgaagcaacagcaaccaaaactGCAACGCCGCCGCCAGCGTTAAGCGAACGTTCTCCAACTAAAAAGCGTGCGGCTgccacagcggcagcaacagccgtGCAACTAACGCTCAGCCCAACGGATAAGCTGGAGAAAcccaaggcagcagcagcagcagcgcgcaagaaacaacagcaacagcagctaaagcaacagcagcaaaagcaacagcagcaaaaacaacagctgcaaaagcaacagcagctaaagcaacagcaacagcagcaaaagcaacagcagcaaaaggagcaactgcaaaaagagcagcaaaaagaggagcaacaacagcaaaaggagCAACAgaaggagcaacaacaacagcagaaggagcagcaaaaggaacaacaacagcagcagctgcagaaaaATACAGTaactgcagcaggagcaactgCAACCAGTGCTGGTGGAGATTCGGATGCAGAGGGTGCCACCTTTTACATACCCTTACTGCAAGGCGCCAGCAGTGGCGATGGTGGCATTCAAGGCGTTGCCGTCAAACTGGGACGCGAGGGACCCGATGGGCCCAATCAAAAGGTGGTGATGCAAGCGACGCTCGTGACCAAGGCGCAAATGGATACGAACTCAGCGAAGCCGCTGCCCGACAATGAGCAGCTGGTGAAAACGCTGCTCAATGCGgccaacacaaacaccaaTGAGCCAACGACGcccagcaacaatagcaacagcttAAAAGCCAGcacctcagcagcagctgcagcagctgtggcaacagcaacgggagcagcaacaacaattgcctcCGGCAATCTAGTCCGCGTCAATTCTAATTCATCACTCTTCTCTGGCTCTGCCAAATCCCGTAcggctgcaacagctgcagcagctgctgcgatgGCCGTCTCGAATGCGCTGGCCAAAAAGTACAAAGATGATACTCCCATTAAGATGGCCAACAATACGGCATTCCCCAGACACGATGATCCCACACAAATGGTCGAGGCGCCCATTTTTAAGCCCACCGAAAAGGAGTTTGCCGATCCCATTGAGTTTATTGAGCGCATCACACCAATCGCCGCGAGATTTGGCATCTGTAAAATAATACCGCCCGCCAGCTTTAAGCCGGAGTGTCGGATTTCGGATGAGATGCGTTTCACGGCGTACAATCAGTATGTGCACAAGATGCTGCATCGCTGGGGCCCCAGCGCCAAGGAGTTGAGTGCCATCAAAAAGTATTTGGCCACGCAGAGCATTGTGATGAATCATGCCCCCTGGATCGGTGGCATGGAGGTGGACTTGCCGCGTCTCTATCATACCGTGCAGGAGCTCGGCGGCCTCAAGGAGGTCATCGAGAAAAAGAAATGGGCACGTGTCGCCGAAGAGATGTGCATACCAAAGCTCGCCCAGGACCGGGTCACCAAACTGGATGACATCTACTGCAAGTACTTGTTGCCCTACGACACCCTCTCCCCGGCGGAACGCCAAAAACTCTTCGACGAGGTCGAAGCGGATTGGGCGAAGCGGGAGGCACGCGCCCGTCGCAATGCGGATCGTTTTGTCAATTCAACGGAAAGTGTGTCCAATGTGGAGGATGATCTATCCACCGATGAGGACGATGAATCGGAGGAGGAACTCGACGGTGTCTCCATGGAGTGCATTGTCAAGGGTCGTAGCATGCCGCTCAGTCAATTCTATCGGATTGCCCGCAACACAATGGCGCTGTGGTTCAAGAGCACCGATCCCACCGTTAACGAGGTCGAGGCGGAATTCTGGCGGCATGTCGCCGTTCGCGAtagtcatgtgtgtgtgcattccGGCTCCATTGATAGTTCCGGCTGGGGGTATGGTTTCCCCAGTCCGGGCCCCAAGGGCAAGGGTTCGAATTATGCGCGTCACCCGTGGAACCTGAAGGTGCTCACAAATAATGCGGGCTCGGTGCTGCGCTCGCTTGGACCTGTTATGGGCGTTACAGTGCCCACTCTGCATGTGGGCATGCTCTTCTCCGCCTGTTGTTGGTATCGGGATCCGCACGGTCTATCCTGGATCGAGTATTTGCATACGGGCGCCTCCAAGCTCTGGTACGGCATTCCCGACGATCAGAGTGCCAACTTCCGAGCGGCACTCACGTCTCTGATTCCGACGCACTGCCAGAACAAGACCATTTGGTTGCCCTGTGATACGGTGATGGTGCCGCCGCACATGCTTACCGATCGAGGCGTCTCGCTGTGCCGGATCGAGCAGAAACCGGGCGAGTTTATCGTTGTCTTTCCGCGCGCCTACACCTCTAGTCTGGCCACAGGCTATGTGGTCTCCGAGAGCGTTTACTTTGCCACCAACTCTTGGCTCGATCTGGCCAAGGATGACTTTAGGGACATCCATGAGAGTTGTGAGCCGGCCATGTTCtcgctggagcagctgctctTTGCTTTGGGCTATGATCAGCGCGTCAATTCGGACACATTGCATCAGATGCTGCCCATGCTGAACGATGTCTGCGAGAAGGAATCGGCGGCACGTGAACAGCTTAGAGCTGCGGGCGTCACAGCCAGCGAAAAGGTGCAGGCCGAGAAGGGACAAAAGGGGTcgaagaagcaacagcagccgccgcacAAATCCATCGATAGCGAATGCGATCTGTGCCGTGCCAATCTGTACATATCGATGGTGCGCACCGAGGATGGCAACATCTACTGCTTGCAGCATGCTCTGAAGAATATTAACAGTGGCAACGTGCAACCGAAAATGTGCAAACTTGTCTACGCCTACAATGTGGACGATGTGCAGCAGCTGATCCGCCAGTTGCAAGAGAAGATTAATCAGATGCATCACAAGGCGGCCGTTAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETDTPPTSSSAASAAAAAATLAVESSPEMPKRTKVQAQRKFAQGQSAPNSAGGGAFNVASVVAAAAAAAVGTASGSSSSAGPSTSTADSLQQQQPPIEILPNQRPMPQDFLTFLCFRSFQGKPKANDAGVLPPSRDAVNNNNTTTNNKKNNSSSSKKKRGRPAKKPGTEQMPTTTKTASDKIEAAATPTPPPPSQSQPQPLLLAGAVRKRAEVVAEGNRRGGRRQETLKRRSNRAGNKEKDDEPDQQQQQPAQQQQQPAQQQQSNSDAVHVEEEAEDDEEDEFFSAHDASSRNGIASAVADETLCKSEIMQSNTRRGRGRKSVVAAAADSPVAVNESRASKEKEKAPVKRLRQQRESPIFIPSPESSGRMTRQRAFFEPVKVPPKQEPSEVEEKHEEEQEVKEQKKNKEKEQLKQEQLQLQKQSAASAAAVEPKQQQHIKEKINSSIYAKDAAKLENGVTTATAAAAAEQQKGLNVFDFSSDDEQPLAKAIKLKKGGKKAAVGAGGGAGAIAAAAGTANARGRKSAASGSAKKQQRLEEKEKAAVAATPPEELPKTKRGKPLKKKAAEPENDEQGVDAEESDLCPPSPKKPTNNNNARPVRRLAAQLKLQQRSRSPSPQQQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEDDDLSLSSFPDIPNVKQMEKMEKEIKKNAAGKQATSKPPATAVAATTTRAATTEAAEVAGAVGSAAAAAAIEATTETAAAAPPPPPPAPRRGRPPKQAKAAAAGTVKPQIEGMLVKKGALALAKAKSEQQQKNQQEQQQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTATAAAAAAAATVAAATTAAAATTTTTTVAAATTNTAKASNSSSKTETAATTVTQTTSATTAVAAATVAAKTTPTAAAATTTATAATTTATTTAAATTTATAATTTAAAATTTTTTTTAPASAVTLKPPQLGVATATPITPLTMLPLTAKPSPFTISPPSYASAAATLKAMEKKSPVPTSKILNVPATYALPGSGTIGMGVGAVGFGKSTSYLPQASPHYQSPYVRPPTFCAAAGAAVAIGNKTPHPQQQQLLAATAGATSTAQQTSTPLKYQTAPTIYPPPIEAYQCPKINPNFLTPKYDRASILPRVNNNNNAVTISNTSASNFTAPTIARPTLSTLTTPTTPAPVISTTSATVATKATTAVSQSLSLTITATPPAVASTSAAAAAQQQQQSQQQQQQQSQQQQSQQQMQQQQQQQQPHPQQQSPALTMTPTTSTNNNSDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEAYFGDQLSGKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDEYDDSLRPQQSQTPPGPTRDDKESTSFSSSSKNTRGELGKSESAWSAKGPSLKATPVLVSAAAAATAAAAAAAANLRDMDTESDTMDFDKCVTPVNLTQKKEISAASAVANSSSDKRKPKNAVKATAAAAAGSNNKRGGGAAAAANKRLAAATKLSTPTPTNSSSNTPTSAMATTTTLTTTSMSAKRTPIYQSSPSKAKLDNNNKKQQQQQKLPIKTSVYAFGKEEETTTTTANVKKTAATASVAAAAAAGKATNRRRNLEVEATATKTATPPPALSERSPTKKRAAATAAATAVQLTLSPTDKLEKPKAAAAAARKKQQQQQLKQQQQKQQQQKQQLQKQQQLKQQQQQQKQQQQKEQLQKEQQKEEQQQQKEQQKEQQQQQKEQQKEQQQQQLQKNTVTAAGATATSAGGDSDAEGATFYIPLLQGASSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSAKPLPDNEQLVKTLLNAANTNTNEPTTPSNNSNSLKASTSAAAAAAVATATGAATTIASGNLVRVNSNSSLFSGSAKSRTAATAAAAAAMAVSNALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNVEDDLSTDEDDESEEELDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATNSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLHQMLPMLNDVCEKESAAREQLRAAGVTASEKVQAEKGQKGSKKQQQPPHKSIDSECDLCRANLYISMVRTEDGNIYCLQHALKNINSGNVQPKMCKLVYAYNVDDVQQLIRQLQEKINQMHHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527829;
90% Identity: -
80% Identity: -