Dsec002253.1
Basic Information
- Insect
- Drosophila sechellia
- Gene Symbol
- Mblk-1
- Assembly
- GCA_004382195.1
- Location
- NC:20525516-20587953[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.056 1.1e+02 2.3 0.0 1 17 357 373 357 383 0.74 2 2 6.5e-19 1.3e-15 56.5 0.0 1 43 790 833 790 835 0.95
Sequence Information
- Coding Sequence
- ATGGCCGATTGTTCATATGTGAGATGCCAGCAAGAGCGTCGGCTCATCAAAAAGAAGCTATTGAAATGGTCCACGGATATGCTGCATATTGTGGCCCTAGAACGCGTTGCTGAAGAATGTATGGGTCGCAGGCAATGGAAACATTATCAAGACATACTGACGTGCAGCCACTTGAATATCGAGGAGCAACAGCCCATAGCAATAGCCGGTTCCGAGGACGAGCCATCGCAATACAACCACAGCAGCAAGGAGATCAGCCAGAGCAATCCCAACCACTGTAAGACAGAGAACCACCGTCTGGAGCAGCACCACAACGGCAGCCAGCTACTGGAAGAAGATTCTGAGAACAACCAAACATCACACGATTCATCACGTACACCAACACCGGGAGCCACCAGTACACCATCACCACCGCCAGAACCCATCGATTGGAGACCGTCGGCCAAGTGCAACTTCTGTGTTAACGGTCGCCTGCTAACGGTTAACGCCCAGGGCAAGTTGGTGGCCGAGTCAGCAGCAACTGCCACTAGTAGTAGCACTAGTAATAGCCACATTCATCAGCACGACAGTGACAGCAACTCGAGCGCATCACTGCCCCaccacatcagcagcagcagcggcagcaacaacaatagcagtGGCAACAGGGCACGCCACATTGCTGCTGCAAGTGCAagagcaacaccagcagcggCCACACCCGCCAACTCCCTCGAACTCTACAAGCTGCTGACCCAGCGGGCAGCCAAAATGACATCGATGGACTCGATGGCCGCCCAGCTGGCGCAATTCTCACTGCTGGCCGACTTCAATCTGATCAACTCGCTGGCCAGCcaacagcaccagcagcagcagcagcaacagcaacagatcGCTAGTGCGGTAACGCCAACTACCTCAGAAGTATCTGCAGCCGCAATCAGTCCCGCACTCAAAGATACACCCAGTCCCAGTGCGGATGCACCGCTCGATCTTAGCAGCAAACCATCGCCGAACTCATCGATTAGCGGCGATGTGAAGTCCGTCAGAGcctgtgccacgcccacgtcATCGGGAAGAAGGGCGTACAGTGAAGAGGATCTGAGCCGGGCCCTGCAGGATGTGGTGGCCAACAAGCTGGATGCCCGGAAATCGGCTAGCCAGCACCACGAGCAGCGCTCCATTCTGGACAACCGGCTGTTCAAGATGAAACACCAGGACCAGGATCAGGATCATGATGGCGACGAGCTCGAGGACTCCAACGATGATGCTGAGGCGGAAGTGGACAGCAATGCGTCGACACCGGCGTATCCGGCAGAGTTTGCAAGGGCACAACTGCGCAAACTGAGCCACCTGTCCGAGCACAATGGCAGCGATCTGGGCGAGGATCTGGATCGTGGATCACCGAAAATGGGGCGACATCCGGCCTGCGGCAATGCCAGTGCCAATCAGGGCGCTCCGCCATCCATTCCGCTGGATGCCAATGTCCTGCTGCACACTCTGATGCTGGCAGCTGGCATCGGAGCAATGCCCAAGCTGGATGAGACGCAAACGGTGGGCGACTTGATCAAGGGTCTGCTGGTGGCCAACACTGGTGGCATGATGAACGAGGGACTGCTGAATCTGCTGTCCGCCAGTCAGGAGAACAGCAATGGTAATGcctcgctgctgctgcaacagcagcagcatcagcaacaccatcaacagcagcagcagcatgtaGCCGCCTACCGGCATCGCCTGCCCAAGTCGGAGACTCCGGAAACGAACTCCTCTTTGGATCCGAACGATGCCAGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGTccggccagcagcagcagcctgtCGCCGAGCGGACTGGTAGGTGGTCACCACCATACgctgaacaacaacaacagcctcagcatcagcaacaacagcaaccacagcagcaacagccatCGGAACGGCAGCAATCGCAGCCCGCATTCCGCATCGCCCATGCTGGCCGCGGCCGTGGCCCAAGGTGGCTACTCCGCCGGCAACAGTTTGCTGACCTCATCCTCGTCCAGCATACAGAAGATGATGGCCAGCAATATCCAGCGGCAGATCAACGAGCAGAGTGCCCAGGAGAGTCTCAGGAACGGGAATGTTAGcgattgcagcagcaacaatggcgGCTCCTCCTCGCTGGGATACAAGAAGCCGAGCATTTCGGTGGCCAAGATCATTGGCGGAACGGACACCTCACGGTTCGGAGCCTCGCCCAATCTGCTGTCCCAACAGCACCATCCGGCTCACCACCTGacccaccagcaacagcagcagcagctaagCGCCCAGGACGCATTGGGCAAGGGAACGCGACCAAAAAGGGGCAAGTATCGCAACTACGACCGCGACAGTTTGGTGGAGGCGGTCAAGGCGGTGCAGAGAGGTGAAATGTCGGTTCATCGGGCGGGCAGCTACTACGGCGTACCGCATTCCACGCTGGAGTACAAGGTCAAGGAGCGTCACCTGATGCGACCGCGCAAGCGGGAGCCCAAGCCGCAGCCCGATCTCGTCGGCCTGACCGGACCAGCCAACAAGCTGCAGCTGGACAAACTGAAGGCGGGACCACATGGTGGCTCCAAGCTGAGCAATGCCCTTAAGAACCAAAACAACCAggcggctgcggcggcggcggcagcagcagcagcagcggccgctgccacgcccaacGGCCTGAAACTGCCCCTCTTCGAGGCGGGTCCACAGCAGTTGTCCTTTCAGCCGAACATGTTCTGGCCCCAGACGAACGCCACGAATGCCTACGGCCTGGACTTCAATCGCATCACGGAGGCGATGCGGAATCCCCAGGCCTCCAATCACCACGGCCTGTTGAAGAGTCCCCAGGACATGGTGGAGAACGTGTACGATGGCATCATCAGGAAGACGCTGCTGGCGAGCGAGGGCAACGGCAGTGCGGCGGGTAATggcagcaacggcagcaatGGCAACGGGCATGGGCACGGGCATGGCCATGGACACGCCCTGCTCGATCAGCTGCTGGTGAAGAAGACCCCCTTGCCGTTCACCAACCATCGGAACAATGACTACGCCGCCACCAGCGGGGAGAGCGTGAAGCGGTCGGGCAGTCCCATGGGCAACTATGCGGACATCAAGCGGGAGCGCCTGAGCGCCgacagcggcggcagcagcgatGAGGAGCACTCGGCCAgccacatcaacaacaacaacagcgattTGGCGCACAACAAGAACAagagcggcggcggcggcaatgGCCAGACCAATGGGAACGGCAGGAGCAGCCGGATGACGTCGCGGGATGACTCCGAAACGGATGCCAGCAGTTTGAAGAGCGGCGAAAGTGGCGGCCAGCAAAACCATAAAATGATGGATCTCaatggcggcagcagcagcagcagtcacATCAAGTGCGAATCGGAGGCGGCCACCGGACACCACAGTCCTGGACACCACACCACATCCATACTGCACGAGAAGCTGGCCCAGATCAAGGCCGAGCAGGCGGACCAGGCGGATCAGTTATAG
- Protein Sequence
- MADCSYVRCQQERRLIKKKLLKWSTDMLHIVALERVAEECMGRRQWKHYQDILTCSHLNIEEQQPIAIAGSEDEPSQYNHSSKEISQSNPNHCKTENHRLEQHHNGSQLLEEDSENNQTSHDSSRTPTPGATSTPSPPPEPIDWRPSAKCNFCVNGRLLTVNAQGKLVAESAATATSSSTSNSHIHQHDSDSNSSASLPHHISSSSGSNNNSSGNRARHIAAASARATPAAATPANSLELYKLLTQRAAKMTSMDSMAAQLAQFSLLADFNLINSLASQQHQQQQQQQQQIASAVTPTTSEVSAAAISPALKDTPSPSADAPLDLSSKPSPNSSISGDVKSVRACATPTSSGRRAYSEEDLSRALQDVVANKLDARKSASQHHEQRSILDNRLFKMKHQDQDQDHDGDELEDSNDDAEAEVDSNASTPAYPAEFARAQLRKLSHLSEHNGSDLGEDLDRGSPKMGRHPACGNASANQGAPPSIPLDANVLLHTLMLAAGIGAMPKLDETQTVGDLIKGLLVANTGGMMNEGLLNLLSASQENSNGNASLLLQQQQHQQHHQQQQQHVAAYRHRLPKSETPETNSSLDPNDASEDPILKIPSFKVSGPASSSSLSPSGLVGGHHHTLNNNNSLSISNNSNHSSNSHRNGSNRSPHSASPMLAAAVAQGGYSAGNSLLTSSSSSIQKMMASNIQRQINEQSAQESLRNGNVSDCSSNNGGSSSLGYKKPSISVAKIIGGTDTSRFGASPNLLSQQHHPAHHLTHQQQQQQLSAQDALGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKLQLDKLKAGPHGGSKLSNALKNQNNQAAAAAAAAAAAAAAATPNGLKLPLFEAGPQQLSFQPNMFWPQTNATNAYGLDFNRITEAMRNPQASNHHGLLKSPQDMVENVYDGIIRKTLLASEGNGSAAGNGSNGSNGNGHGHGHGHGHALLDQLLVKKTPLPFTNHRNNDYAATSGESVKRSGSPMGNYADIKRERLSADSGGSSDEEHSASHINNNNSDLAHNKNKSGGGGNGQTNGNGRSSRMTSRDDSETDASSLKSGESGGQQNHKMMDLNGGSSSSSHIKCESEAATGHHSPGHHTTSILHEKLAQIKAEQADQADQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00504608;
- 90% Identity
- iTF_00596571; iTF_00591622; iTF_00619074; iTF_00543056; iTF_00539582; iTF_00504608;
- 80% Identity
- -