Basic Information

Insect: Drosophila saltans
Gene Symbol: -
Assembly: GCA_018903575.1
Location: JAEIGH010000005.1:3823113-3824707[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 3.1e-06 0.00034 21.4 5.0 2 23 262 283 261 283 0.96

2 5 3.1e-05 0.0034 18.3 0.7 1 23 289 312 289 312 0.96

3 5 0.00018 0.021 15.9 2.3 1 23 318 340 318 340 0.97

4 5 5.5e-06 0.00062 20.6 0.4 1 23 346 368 346 368 0.97

5 5 0.00014 0.015 16.3 1.6 1 23 374 398 374 398 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	3.1e-06	0.00034	21.4	5.0	2	23	262	283	261	283	0.96
2	5	3.1e-05	0.0034	18.3	0.7	1	23	289	312	289	312	0.96
3	5	0.00018	0.021	15.9	2.3	1	23	318	340	318	340	0.97
4	5	5.5e-06	0.00062	20.6	0.4	1	23	346	368	346	368	0.97
5	5	0.00014	0.015	16.3	1.6	1	23	374	398	374	398	0.91

Sequence Information

Coding Sequence: ATGACGCGGCAATGTCGAACTTGCGCTGGTGTTATCTATAACCGAAAGGCAAAGAATCTCTTTAAGGTAGAGAATGCGGATGTGTTGGTTAATATTGAGTTGCTGTCGGGAACGACGCTGCTCAATGAACCGGATCTGCCGACATCAATTTGTGCCTGCTGTATTTTAGATCTTAACCAGGCCATAGTGTTTAGAGAGCGATGCGTCAAGACACAGGAACGTTTTCTGCAGCGTCGCTTGTGGCAAAACAGTGAAGATGATATAATTCTTAAGGACGACAGCGATATTGATGCAAATAATGAGTTTGACGTGTCAGGCAATGAATTGAACGATGCCTTCGACAATGTTGACGAGGAGGTTGAGGATCTACTTGGCTTTCCGGAAGGCGACATCGACAATAACTCCAACACTACTGAAAGAACCGAGCAGATTGATGCAGATGAGGATGTAGTTGAAGATGTTGAAACCTTGATTACAACTGTGCAAAAAGAGATGTTAAGTCTATGTGATAATAGTAGTGAAGTTCCAGATGCCAAGGCAGATGTCATCGATGTGGTGGTGTCATGTTCACCTTCACCAATACCAGAGATAATTAAAAAGAATTCTCTTGGTCGACCCCATAAAAGCACTGTCACTAAAACGAAAAGAATTGGCAAGAGCTGCAAAAATTCAGGTATTGACAGTGTGCGGAATGGATCTTCACGAAAGCCATACACCACTTGGAAGAATCTAACAGAGGAAGAAGCCACTCAACGAAAGCGGGAACAGCGTCGTCGAGATTGTGTCTGTGAGCAGTGTGGTCGTCATTTTACTGACCAGAGCAACTTTAAGCTCCACATGTTAAGGCACACGGGCGTAAAGAACTTTGCTTGCACTGAATGTGACAAGAGATTCTACACGGAACATCTATTGGCTTTGCACGAAAGGATTGTACATAAGGGCGAGAAGCCGTATGCCTGTAAATACTGTGGCAAGACCTTTCACAATAGCACAACACGCGTTATTCACGAACGGATTCATACCAATGCCCGTCCATATAGCTGTGAGTATTGTGATAAGGCCTTTAGTTCGGCTTCAGGACGCAAGAGGCATGAATTAGTGCATACTGGTATCCGTTCATTTTACTGCGCTATTTGTGAACAACCATTTCAACGAAGCACACACTTAAAGGCTCATTTAAAGTCTAAATTACACATTGCGCGAGCGGCTCGAGTACGACACTTACCTCAGCCTACAGATAGTTAG
Protein Sequence: MTRQCRTCAGVIYNRKAKNLFKVENADVLVNIELLSGTTLLNEPDLPTSICACCILDLNQAIVFRERCVKTQERFLQRRLWQNSEDDIILKDDSDIDANNEFDVSGNELNDAFDNVDEEVEDLLGFPEGDIDNNSNTTERTEQIDADEDVVEDVETLITTVQKEMLSLCDNSSEVPDAKADVIDVVVSCSPSPIPEIIKKNSLGRPHKSTVTKTKRIGKSCKNSGIDSVRNGSSRKPYTTWKNLTEEEATQRKREQRRRDCVCEQCGRHFTDQSNFKLHMLRHTGVKNFACTECDKRFYTEHLLALHERIVHKGEKPYACKYCGKTFHNSTTRVIHERIHTNARPYSCEYCDKAFSSASGRKRHELVHTGIRSFYCAICEQPFQRSTHLKAHLKSKLHIARAARVRHLPQPTDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00501337;
90% Identity: iTF_00483958;
80% Identity: -