Basic Information

Gene Symbol
NCOR1
Assembly
GCA_018903575.1
Location
JAEIGH010000017.1:552650-559913[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-08 0.00011 22.8 0.0 3 43 504 544 503 546 0.97

Sequence Information

Coding Sequence
ATGGATGAGTGGGTGGTGATGATGGATGCAAAGAGATTGCAGAAGAAGGAAAGACCTGGGCCAGGAAGTGCTGCTGCTGCTGCCGCAGCAAATAGTTATGCCAAGTTTGGGGATGCCCCACATCGATTTATTCAACAACCGGGAGCATATAGCATTGGTCCAGTGCCCACATACCGTGAGAATCCCTATTCGCGCATACCTCAACAAATGCAGAGCTCGGTGCCGTCGGAGTACCAAAGGGTTGCTGCACGTGCCGCAGCGGTTGGTGGCAAAAGTGTTCAAGTCGGTGGACCCCAATCTGGTGGTGTATTGGTCATGGAAACACTGGCAGCAACTGGTGGACCTGGTCCTGGTCCTGGTGGTGTTAGTAGCGCATCCGTTTTAACGCCACTCTCCATGCAACAACTGAAAGTGGATACATTGCCTCCGCCGCCGCCACAGCTGACAATGTCAGCAACGCTAACACCAAGGCTAAGTGCATCCTCATCCTCTGCTTCATCCATGGGTGCGGTAACAGTTTCAGCAGCCCCCGCTCCTGGCAGTAGCAGTGGTGTTGGCAGCATGTCTACATCGGTTAGCATATCGTCATCATCGTCACTAGCATCCACCAGCTCCTCCTCCAGTACAGAAGCCTACCATCCACAGGTGGAGGCCATTTCACCCACCCTGCCCAGCGATAGTGCTGAGGAACGTGGTCGGACCACAGCAAAGGAGGATCTACTAATGCAAATCCAGAAAGTTGATAACGATATCAAATGCGCCGAAACCACTATGGATACGCTACGTAAAAAGGAGAAGACCCTCATGGAGGAGGCAGCTGTGACTAAGCAACAAAAAGTTGCTGCCGAACAGGCTGCCGCCGCCCAGGGTGATGAGGTTGTCGAGTTGGCCTGGCGCACCCAAATGTTGGCCGAAAAGATCTATGCGGCGAATCGTAAAACGGCCAAAGCCCAACATTCCATGGTGAGCCAAGCTAGCGGAATGGAACGTGCGCATTCCTGGCTACCCCTGTACAATCAGCCGCTAGATGTCGAAGTCCTGACGACACTAATCAAGCGGCATCAGACACTGGTGAAGGCACCGTTATTGCTACACATACGCAAATTGAAGGCCGAACGATGGGAGCACAATCAGAGTCTGGTTGAGAAATATACCAAGGATCAGGCCGATTGGCAACGTCGTTGTGAACGTGCCGAATCGAGTGCCAAGCGGAAGGCGCGTGAGGCCAAAAATCGTGAATTCTTTGAGAAAGTCTTTACGGAATTGCGCAAACAGCGGGAGGATAAGGAACGCTTCAATCGTGTGGGTTCGCGCATTAAATCTGAAGCCGATCTCGAAGAGATAATGGATGGTTTGCAGGAGCAGGCATTGGAGGATAAGAAAATGCGTTCATATGCGGTTATACCGCCCCTCTTGTATGATGCACGTCAACGACATTGCGCCTATCACAATGAGAATGGACGTATTGAGGATATGGTGGCTGTACATCAGGAGCGGAAAGCTCTCAATATGTGGACAGCCGGTGAGAAGGAGACTTTTAAGGAGAAATATCTGCAACATCCGAAGAATTTTGGCGCAATTGCTTCCAATTTGGATCGCAAATCACCACAGGATTGCGTCCGCTACTACTACCTCAGCAAGAAGACAGAGAACTATAAGCAGCTGTTGCGCAAATCGCGCCAGCGCACACGCAGCTCTCGCAATCCGGCCAAGGCTCAGGCGGCACAGCCCCAGTGCATCATTGATTCATTGACAACGGGCGTTACGACACGTCTGCAACGTGAGCAGCAACAGAAGTCCGGCAATCGTTCATCGGCGGTTGCTGAGAAGGAGCGTGCCGAACGGGCCGCCGAAAGGGAACGTGTGGCGGAGAAGGCAGCCGCCGATGCTGCCAAGGCAGCGGAAAGTGCTGCCGAGAAAGCTAGTGCTGCCAGCAAAGCTGTCGAAATCTCAACTGGCAGCACAAGTAGTAGCGATGCCGCCAAGGCCAAGACTGCTGAAGAGAATGCGGCTGCGGCGGCGGCGGCGGCAGAAGGAGCAGCAGCAGCAATAAACGCATCCACCGCAACAACAACAACAGTTTCATCATCAAGTAATGCAACAACCGCTAAAGAACAGGCATCAGCAAAGAGCAGCGAGGCTGCCACAGCGCCCAAGGCAAAGGCCGATGCCAAGGCAACAGATGTATCCAAAGTGGCTGAAATGCCGCCCACGGAATCTGTCGAGCAGTTGGCCAAGGGTAAGACAAATGTCGCCAATACCGATAATTATAATGCAGTTAATAGCAGTAGCTCCGCCACATCCTCCTCAGCGACAGCAGGAGGGCCGCCAGTTAGTGTGGCTCTCAATGGCTTTAAGCCCGGTTATCAGAGTGTGGTTATGGCCAATGTGAAGGCATCATCGGGACACAATAATGATGAATCTACAACAACAACAACAACAACAACAGCAGCAGGAACAGCAGCAGGTACAAATGCAGCAAATGTTGGCGATAAAATTGCCAAGCAAACGCCAACATCTTCTGCTGCCGGCAACAACAACAGTATTCCCACTGTTGTCGTCTCCGAGGGAAGTGGCCTAACAACGGCCACAACAGCAGGCAATTATCTAGGACAAAAACTGAAGGCAGCTCAGGTTGAAGGTCTGGGTGCCGGCAATGAGATTCACTCAGATGTTAGTGATGCGAAAAAGAAACGTTTCGAATTGGCGTCAAGTGGTGAGGTGGTAACTGGAGGTGCGTCTAACGTAACTAGTGCCGCCGCTGGGGCCATGATCACCAATAGCAGCAGCAATAATAATAATAATAATAACAACAACAATAACAATAACAATAATAGTGTTATTGGTAGCGCCAACAAGACCAATGCTAAAGATATAAAGCCATCGATATCCTCCTCATCGGCAGCATCATCTGTGGTCTCTGCCGCTTCCTCCTCTTCGTCGTCATCGTCGTCGTCATCATCCATGTTGCTCATCACCGCTGCATCAATTATGTCTACGGCAGGATCGACAACACCATCAACCACAATGGCCACATCATCGGCAACGTCCATGCCAATGCCCATACTGGCGGATGGCAACAATGTCAATTTGTTAAATGCAAATGATGTCCTGGCCCTCGATGGCAAAGTATTATATGTCCTGTCCTGTCCTGTCCGTTTACTGACTGCTAGTAGTGCTCTGTCGTCCTCTGTTAGAGTTTCCCTATCATTGCCCCCACCTTCACCGCCACCGCCACCCGCGTCCGATTAA
Protein Sequence
MDEWVVMMDAKRLQKKERPGPGSAAAAAAANSYAKFGDAPHRFIQQPGAYSIGPVPTYRENPYSRIPQQMQSSVPSEYQRVAARAAAVGGKSVQVGGPQSGGVLVMETLAATGGPGPGPGGVSSASVLTPLSMQQLKVDTLPPPPPQLTMSATLTPRLSASSSSASSMGAVTVSAAPAPGSSSGVGSMSTSVSISSSSSLASTSSSSSTEAYHPQVEAISPTLPSDSAEERGRTTAKEDLLMQIQKVDNDIKCAETTMDTLRKKEKTLMEEAAVTKQQKVAAEQAAAAQGDEVVELAWRTQMLAEKIYAANRKTAKAQHSMVSQASGMERAHSWLPLYNQPLDVEVLTTLIKRHQTLVKAPLLLHIRKLKAERWEHNQSLVEKYTKDQADWQRRCERAESSAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLLYDARQRHCAYHNENGRIEDMVAVHQERKALNMWTAGEKETFKEKYLQHPKNFGAIASNLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAAQPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAEKERAERAAERERVAEKAAADAAKAAESAAEKASAASKAVEISTGSTSSSDAAKAKTAEENAAAAAAAAEGAAAAINASTATTTTVSSSSNATTAKEQASAKSSEAATAPKAKADAKATDVSKVAEMPPTESVEQLAKGKTNVANTDNYNAVNSSSSATSSSATAGGPPVSVALNGFKPGYQSVVMANVKASSGHNNDESTTTTTTTTAAGTAAGTNAANVGDKIAKQTPTSSAAGNNNSIPTVVVSEGSGLTTATTAGNYLGQKLKAAQVEGLGAGNEIHSDVSDAKKKRFELASSGEVVTGGASNVTSAAAGAMITNSSSNNNNNNNNNNNNNNNSVIGSANKTNAKDIKPSISSSSAASSVVSAASSSSSSSSSSSSMLLITAASIMSTAGSTTPSTTMATSSATSMPMPILADGNNVNLLNANDVLALDGKVLYVLSCPVRLLTASSALSSSVRVSLSLPPPSPPPPPASD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-