Dsal001450.1
Basic Information
- Insect
- Drosophila saltans
- Gene Symbol
- bab2
- Assembly
- GCA_018903575.1
- Location
- JAEIGH010000006.1:974960-977107[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-12 1.3e-08 35.0 0.1 1 44 305 348 305 349 0.91 2 2 2.1 6.2e+03 -2.4 0.9 4 20 446 461 446 461 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGTGGTGGCGGTGGGCCCACACCCACTCCCGTTGCCAGTAGTGAAGGGCAAACCTATTGCCTTCGCTGGAATAATCATCAGACGAATTTGGTACAGATACTCCATGCTCTGCATGAGGTGGGCAGCTATGTGGACTGTACTCTGGTTGTGGATGATGAGCAGTTTAAGGCTCATCGTGTGGTCTTGGCCGCAAATTCACCATATTTCCAGCATATATTACAGGATGTGCCACAGGATCATTGTAGCATCATTTTGCCAGGTGTTAAGGGATTCGAAATTGCAGCACTTTTGCAATATATGTATACGGGTGAGACGACAGTGACCAAAAGCCAGGAGCCGGAAATCCTGCGCACAGCCAAAGAGCTGCAGCCGCCATATACGAATTATCCATCCGGACCTAGCCATCCACATATTCCAGCCGGTGAGACCCCATTGACCCCGACACATACGACACCCCATGCTGCAGCCGGTGAGGCTGGTGGCCAATGGCCACTATCTCCCTCTGCTGCCGCCGCTGCCATGTTGAATTCCGTCTATGAGAGTGCTGCCGATATGAATCCACTCAAGCGCAAGAAGCTCTCGGCCATATCTAGTATGTTGCTCAATAGTACTCGTGACACTCCCATTCTGCGTAATGTACTGGCTCAGGCCAATCCGGCGGACTCTTCCCAGCAACAGCAACCCAATCCTTTGCTCTTGAAGAGTTCTTCCTCGTCCTCGCTGGCGGAGAAGGCACCCACACATCAGAGTGGTGGCATGGGAGGTGGAACAGGTAGCCACAGTTTCAATGGCTCAGACTACGGCGGCGATAAGGAACCCCTTTCGCCCCATACAGATCGCTCGTTCGATGAGGAAACCGGAGGTCCTGGTGGCAAGAAACCAGAATGGAAACGCTATAAACAATATACCCGTGCCGACATGATGTGCGCCATTCAGGCGGTGCGTGAGGGCATGAGTGCCTTACAGGCGAGTCGTAAATATGGTCTACCCAGTCGAACTCTGTACGATAAGGTGCGCAAATTGAATATTACCACAGGTCGTGGCACTCATCGTACACCCAAACGTAGTCCACCTGGCGTGGAGTCGTCGGCTGCCTTCCCCTATTCCGCTGCAGCAGCAGCTGCTGCTGCCCACAATTATGGCCACGGACAGGCAGAGCTGCTGGAACGCAGTGAGCAGGCCAAGGAGCATGGTTCCCATCATTCACATCACGGCATGCCACCAACAATATCCCATTCGGCAGCTGCTCTGCTGGATCATGCATTCCTCCAGCAGGCCCTGGAGAACCGTGGTGGAGATATGGCTGGACGAGAGGCACTGCATGCCATGGCATTGGCTGCCGCAGCACATGCTGCTGCCAATCGCATGTCCACAAGTCCACCAGGTTCAGGTTCAAATGGTCATCCGCATGGCGCACGATCACCAAGTCCCAGTCCAAGTCCACGCCATTATGCCGAGGATTTGGAAATGCATGAGACCAAGCATGAACGGATGATCAAGCGTGAACGAGATCAAGATGAACGCGAAGATGCCGATGCTGATGATGAAGAGGATCATGATCATGTTGAAGATTTATCATTGGCGCGAAAAGAAAGACCCGAATCGCCATATTCACCGCCACCGCCAAGGGCCTCATCCCCCATGGAGGGAGCCAGTGTCATAATGCACTCCTCAAATTCTATGTCAACAAATGGCAAAGAGCATGAGGATTATCCAGCCTCTGCTTCATCACCACCACCAGCACCACCTTTGGGTCTTGGCCTAGGCCTTAAACGGGAACTAATGGGGGGCGATGAAACGCAAGCGCGCACAGACTGA
- Protein Sequence
- MGGGGGGPTPTPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQPPYTNYPSGPSHPHIPAGETPLTPTHTTPHAAAGEAGGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQQQQPNPLLLKSSSSSSLAEKAPTHQSGGMGGGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAHNYGHGQAELLERSEQAKEHGSHHSHHGMPPTISHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSTSPPGSGSNGHPHGARSPSPSPSPRHYAEDLEMHETKHERMIKRERDQDEREDADADDEEDHDHVEDLSLARKERPESPYSPPPPRASSPMEGASVIMHSSNSMSTNGKEHEDYPASASSPPPAPPLGLGLGLKRELMGGDETQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501130;
- 90% Identity
- iTF_00591059;
- 80% Identity
- iTF_00591059;