Druf007283.1
Basic Information
- Insect
- Drosophila rufa
- Gene Symbol
- srp
- Assembly
- GCA_018153105.1
- Location
- JAECXS010000001.1:13723536-13754470[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.5e-19 2.5e-15 55.6 1.9 1 35 328 361 328 362 0.97 2 3 0.18 6.9e+02 -0.3 0.2 23 34 715 726 707 728 0.69 3 3 2.2e-17 8.3e-14 50.7 6.9 1 34 767 799 767 801 0.97
Sequence Information
- Coding Sequence
- ATGTCCTTTGGCCCGGTCCTGAAATTCTACACGCGTCTCCTCTACGAGCACTACGCCGCCAGCACGGATCCCATAATGAGGAACAACTTTGCGCTGTACAGCTTCTACGGAGGAGGCGGCGGCGGCGGCGGAGGAGGAGGCGGCGTCAGCGATCCCAGTCATGAGCACCTGCCCCATCATGTGGTGGCAGCGGCACAGGCAGCGGCAGCGGCAGCAGCAGCCGCCCAGAGCTCCACGCCCAACATTGACGAAGTGATCCAGGACACGCTCAAGGACGAGTGCTTCGACGACGGGCACAGCAGCAACTACCATGTGCTGACCTCCGTCTCGGACCTCCACACGCTCAAGGAGGCCAGTCCGAGCTTCACGCAGCTGACCAGCGCCACCCACCGCGACAGCCTCTCGCCGGCGGAGCACGGCGGCTACTTCGGGGCGACACAGCTGAGCCCCAGCTTGCAGAACAGTGGCGCCGATCGCTACGCTCCGCTGGCCAATTACCGCGGTCAGAACGAGAGCTGGTTCGAGCCGCTCAGCTACACGCAGGCAGCTGGACAGGCGCAGCTGGGCGTTGGAGCCGGCGTGGTCACCAATGTGATACGGAACGGAAGAGCGATCTCGGCGGCCAATGCAGCAGCCGCAGCGGCCGTGGACGGGAGCACGGGTCGCGTCGATCCGGGCTCCTTCCTCTCCGCCTCGGCATCGCTGTCAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGAACTACTCATTTAATGTGGCCGCTGGCGGTGGCGGAGGCCGTAGTAAGGCCAGCACGAGCGCCGCCAGCTCGCAGGCCTCCGGCTCCTGTCCAGCCTCGGGTGCGACCTCGGCATCGGCGGCGGCGGCGGCCGCGTCGGGAACGGGAACGGGAGCGACTGCAGCCACGACGCTCGACGAGCATGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCACGAAGCGAGCCGGTCTGTCCTGCTCCAACTGCCTCACCACCTACACTTCGCTTTGGCGACGCAATCCCGCCGGAGAGCCCGTGTGCAATGCCTGCGGCCTGTACTTTAAGCTGCACAGCGTGGCCCGACCTCTGACCATGAAGAAGGACACCATACAGAAACGCAAGCGCAAGCCGAAGGGCACCAAGGGCGAAAAGTCCAAGTCCAAGATGAAGAGCGCCCTGAACTCCACGCTGGAGAGCGGCTCCTTGACGGCCAATTGCCACAATGTGGGCCTGGGCATGGACAGCAGCCAGATGGACGTGAATGATGTGGGCGTGGGCGTGGTGGTCCAGACCAGCCAGGCGGGCGTCAGCGAGCCGGAGGAGCAGTACGTGGTGGTGCCACGCATTCAGCGACGCATCCTGACCACAGCGGGAACACTTGAACTGAACGAGGCGCGCGAGGGAGAGCCCAGCACGAACGCCAGCAGCGCCAGCTCGGGATCCGCCCCCGATAGCCATATCGAGTACCAGCGGAGCTCGCACCACTCGCCCGGAGCCACCCACTACGTCCAGATGGCGCCCCGCAACGCAGAGGTTCCCGAGCAGGTGACCACGGCTGCCGGAGCACCGGCGGGCACCCTGTACGCCTACTCCACGGGCTCCATCATCTGCAGCGGCGACGATGATGGACGCTTCGGCACAGCCGGACCGGAGACCACCACCTCGAGCCTGTACTACGAGGCGCCAGTGGTGGAGGGCAGCGTGCATGCCAACGAGTCCAAGACATACGCGGACCTGGGCAACGCCTACGCCCCCTTCCCGCCCAGCTCCAGCTTCAGCAGCAACAGCTATGCGGCCGCCCTGCAGCAGACGAATACCATCTACACGGTGCCAGGGACCGGGCAGTTCCTGACCAAGTCCGAGTCCGGACTGAACTCGCTGCGCCAGGCGGGACCGACCACCTTCCAGACGATCTCCTTTCCCGACGGCAACAATGCCATCGAGGCCCTGTGGACGTCGCCAGCCCCGCCGGAGTACCAGAACGTGTCCTTCGGCAACTTCCATCCGCAGGTGATCGACGAGTACGCCTCGGGCAACATGCCCACCACCCACTGGCCCTCCGCCGGCGGGATCGCGCAGTACGAGGCCAGCCTGGTGACCGCCTCGGCCACATCCTCGCCGAACCACGAGCTCAAGTGCGAGAACTGCAACCTGCCGTACATGCGCAAGGGCACCTCCGAGTACTTCTGCCCCAACTGCCCGCCCTTCATGCGGATGCCCCCGCGGATGCCGCAGCGACAGGCGAAGCCCAAGGCCGCCGCCGCCCCCAATAACCGCCGGAATGGGGTGACCTGCGCCAACTGCCAGACCAACTCGACGACGCTCTGGCGGCGCAACAACGAGGGCAATCCCGTGTGCAATGCCTGCGGGCTGTACTTCAAGCTCCACAACATGAACCGGCCGCTCTCCATGAAGAAGGAGGGCATCCAGAAGCGGAAGCGCAAGCCGAAGAACAACGGAGGAGCGCCCATGCACCGGGCACCGCTGCCAAGCATGGCGCAGGGTGTCAATCTGATGGCCAACAGCCCGCTCTACCCGTCACAGGTGCCGGTGAGCATGTTGGGCGGTGGCCAGCAGAACGCCAGTCCGGAGCTGCACGACATGTCGACGACGGGTCCGGCGGGTGGACCCCGGGTGGTGGCTATCTCGCTGAACTCGGCGGCACCGCCCACCTCGGAGGGATCGCTGAACATGTCCGCTCGCCACCACGTGACCGGTGAGAGCCACTCGCCCTACAGCCAGCAGTCGACGCCGCAGAGCCAGTCGCCGCATCTGCCCAGCACGGTGACCATTAATCGCCAGATAGTCCAGCCAGTACCCAGTATTGAGAGCGGGCGCAGCTCCAACAGCGACCTGACCCCCAGCGTGATCACGCGCACTGGACTGCCGGAGCGATCTTCGAATAACTAA
- Protein Sequence
- MSFGPVLKFYTRLLYEHYAASTDPIMRNNFALYSFYGGGGGGGGGGGGVSDPSHEHLPHHVVAAAQAAAAAAAAAQSSTPNIDEVIQDTLKDECFDDGHSSNYHVLTSVSDLHTLKEASPSFTQLTSATHRDSLSPAEHGGYFGATQLSPSLQNSGADRYAPLANYRGQNESWFEPLSYTQAAGQAQLGVGAGVVTNVIRNGRAISAANAAAAAAVDGSTGRVDPGSFLSASASLSAMAAESGGDFYKNYSFNVAAGGGGGRSKASTSAASSQASGSCPASGATSASAAAAAASGTGTGATAATTLDEHVSRANSRRLSATKRAGLSCSNCLTTYTSLWRRNPAGEPVCNACGLYFKLHSVARPLTMKKDTIQKRKRKPKGTKGEKSKSKMKSALNSTLESGSLTANCHNVGLGMDSSQMDVNDVGVGVVVQTSQAGVSEPEEQYVVVPRIQRRILTTAGTLELNEAREGEPSTNASSASSGSAPDSHIEYQRSSHHSPGATHYVQMAPRNAEVPEQVTTAAGAPAGTLYAYSTGSIICSGDDDGRFGTAGPETTTSSLYYEAPVVEGSVHANESKTYADLGNAYAPFPPSSSFSSNSYAAALQQTNTIYTVPGTGQFLTKSESGLNSLRQAGPTTFQTISFPDGNNAIEALWTSPAPPEYQNVSFGNFHPQVIDEYASGNMPTTHWPSAGGIAQYEASLVTASATSSPNHELKCENCNLPYMRKGTSEYFCPNCPPFMRMPPRMPQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMAQGVNLMANSPLYPSQVPVSMLGGGQQNASPELHDMSTTGPAGGPRVVAISLNSAAPPTSEGSLNMSARHHVTGESHSPYSQQSTPQSQSPHLPSTVTINRQIVQPVPSIESGRSSNSDLTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -