Drub001091.1
Basic Information
- Insect
- Drosophila rubida
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035046165.1
- Location
- JAWNOF010000012.1:7602840-7613376[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.13 1.8e+02 1.7 0.0 2 26 303 328 302 330 0.88 2 2 1e-18 1.5e-15 56.4 0.0 1 43 765 808 765 810 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGACCAACTGACGCGCAACCAATTGAATATTGCAGAGCAACAGCCCATATCAATAATCGAAGCAGAAGCCGAGgagagcaacaactgcaaaccaCTGAACCACCGTTTCGAGCAGCCCAACGGCCAACATttcacacacaacagcaacaacaacggcgcaCTGCAGTTTGAAAGAGATTTTGACAAGAACCACACATCACACGATAACGACTCAAGTGCAACATCACGCAGCTCAGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTGAACACCAAAGGCGAATTGGTGGCCGAAACGAcggccagcaacaataacggcCCAGCGACAGTGCAGCAGcacgacagcgacagcaactcgAGCGCAtcgctgcacaacaacaataagaacagtACTCAGCATAGagcgaacaacaactacaacgccACAACATCAAGAATAAAAACAGCGCCAGCctacaagcagctgctggatcACAACTCTGCCAAAATGACATCGATGGAATCAATGGCCGCCAAGCTGGCGCAGTTCACAGTTCAGTTTGCCGACTTCAATTTGATCAGCAGTCTGGccaatcaacagcaacagcaacagcagcagcagcaacagctggctAATTTGGTAACGCCAACTACCTCAGATGCATCGGCAGCCGCCGCAAGTCCCACACTCAAAGACACAGCCAGTCCCAGTGCAGATGCCCCCCTGGATCTAAGCAGCAAACCATCGCCGAATTCATCCATTAGCGGCGACATCAAGCCAGCCAGAGCACTCTTCGACTGCATCACGCCGGTGACGTCGGCCATGGGCAGACACAACTACAGTCAGGAAGAGCTGCACAGCGCGCTGCAGGACGTGGTGGCCAGCAAGTCGGCGGGCACACGCAAGGCGCCCAGTCAGTACCCCTTGCAACGCTCCATGGTGCGCAACAAGCTGTGCAAAATGTCGCTGGAGtcgaagcaacagcagctgcagcacgaactgaagctggaggagcaggaggactCCGGCGACGAGGCGAACGACGCCGACAGCAACGGCTCCGGCGCAGTGTCCGGCTTCCAGGAGTACGCCCAGCGCATGGCGGCCAACAGCGAGCAACTGCGCAAGCTGAGCGGCATGTCGGAGCACAACGGCAGCGAACTGGGCGACGACCTCGAGCCGGCCATGTCGCCGAAGCTGGCCCGACCCCAGAGTGGCGGCACGCCAAcaacggcagccgcagccgctgccgcagccggcATCCCGGTGCCCATTGACATTGACGTGAATGTGCTGCTGCGCACGCTggtgctggcggcggcgggcaTTGGCGTGATGCCCAAGCTGGACGAGACGCAAACGCTGGGCGATCTGGTCaagtcgctgctgttggccaacaGCGGTCGCCTGATGAACGAAGGTCTGCTCAACGCCGTGGCCGCTGGCCACGAGAGCAACggcgagcagcgactgctgcagcaccagcagcagcagcagcagcaacaacagctggccgCCGTGGCCGCCTTTCGTCGTCACATACCAAAGTCTGAAACGCCGGAGACGAACTCCTCGCTGGACGCCAACGAGATGTGCGAGGATCCGATATTGAAGATTCCGTCCTTCAAGGTCAGCGGCGCTGGCAACAtctcgccgccgctgctgcagcacagcatgagcagcagcaacagcaacgcgatCAGCAGCCGCAACGGCGACCACAGTCCACACTCGGCGGCCTCGCCCATGCTGGCGGTCgctgtggccgccgccgccgccaacaaCAGCTACCGGCAGCagaacagcggcggcagcagcagcggcgccagcaacCTGCTCTCGCCGTCGCCCACATCCATACAGAAGATGATGGCCACGTCCATACAGCGCAAGCTCAACGAGCAGAGCGGCCAGGACAGTCTgcgcaacaacggcaacaccagcggcagcgagtgcagcagcagcggcggtggcggcggcggtggcagtattgctggcaacggcagcgcgagcaacagcggcaacagctacAAGAAGCCGAGCATCTCGGTGGCCAAGATCATTGGCGGCACGGACACCTCGCGCTTCGGCGCCTCGCCCAACATGCTCGCCCAccagcaccagcaccagcaccaccagcagcagcagcagcagcagcagcagctgagtgCGGCGGACGCGGCGCTGGGCAAGGGCACGCGACCGAAGCGCGGCAAATACCGCAACTACGATCGCGACAGTCTCGTCGAGGCGGTCAAAGCGGTGCAGCGCGGCGAGATGTCGGTGCACCGAGCGGGCAGCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGGCATCTGATGCGGCCACGCAAGCGCGAGCCGAAGCCGCAGCCCGATCTGGTGGGTCTGACGGGCGCCGCCAACAAGTTGAACGCCAATCTGAGCGGGCTGGGCCACCTCGACAAGCTGAAGGCGGGCAGCagtgcggcggcggcggcggccaacagcagcggcagcagcagcagcagcaacaacaacaacagtagcagcagtgcGGGCTCGAAGCTGAGCAACGCGctgaagaacaacagcagcaccgcTGCAGCGGTGGCCGCGGCAACGGCGGCCACCTCGAACGGCCTGAAGCTGGCCATGTTCGAGGCGGCGCCGCGGATGCCGTTTCAGTTCTGGACGGCACCGAATGCCGGCGCCAACTACGGCCTGGACTTCAACTGCAATCCCGATTTCCTCAGTCATCCCGGCACCGTGCAGATGAACGAAATCGACTACGCCGAGAACATGTACGGCGACATCATACGCAAGACGCTGAAGAACGAGAACGACGCCGGCAACAGCGTCAGCGGcaacggccacggccacgctCACAGTCACGGGCACGGACATGCGCTGCTCGACCAGCTGCTGGTGAAGAAGACGCCGCTGCCGTTCACCAACAATCGCAGCAACGACTACAGCgtggcagccgccgctgcggcCGTGGCAGCGGCCaccgcctgcagcagcagcgccgaggGCATGAAGCGACCCGGCAGCCCCATGGGCGCCTATGCGGATGTGAAGCGGGAGCGTCTCAGTCCCATGCGCAGCGTGGagagcgccagcagcgaggaggagcACGAGCATGCcaccagcaaaaacaacaacaataacaacaacaataacagtgaCCTGGcgcacaacaagaacaacagcatcagcaacagcaacaacaacaacaacaacggcaacagcaataacgGCAACGGACGCAGTCGCATGACGTCGCGCGACTCGGACACGGACGGCAGCAGTCTGAAGAGCGAGCAGTCGCACAGctcggcagcggcggcggccaacAAAATGATGGATctcaacggcagcaacagcgtcaaGTTCGAGCCGGAAGCTGTCGCCACGGCGCCCATCTCGCCCAGCAGTTCCATTCTGCACGAGAAGCTGGCGCAGATCAAGGCCGAGCAGAGCGACTGCAATGCCAGCGAGGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQDQLTRNQLNIAEQQPISIIEAEAEESNNCKPLNHRFEQPNGQHFTHNSNNNGALQFERDFDKNHTSHDNDSSATSRSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNTKGELVAETTASNNNGPATVQQHDSDSNSSASLHNNNKNSTQHRANNNYNATTSRIKTAPAYKQLLDHNSAKMTSMESMAAKLAQFTVQFADFNLISSLANQQQQQQQQQQQLANLVTPTTSDASAAAASPTLKDTASPSADAPLDLSSKPSPNSSISGDIKPARALFDCITPVTSAMGRHNYSQEELHSALQDVVASKSAGTRKAPSQYPLQRSMVRNKLCKMSLESKQQQLQHELKLEEQEDSGDEANDADSNGSGAVSGFQEYAQRMAANSEQLRKLSGMSEHNGSELGDDLEPAMSPKLARPQSGGTPTTAAAAAAAAGIPVPIDIDVNVLLRTLVLAAAGIGVMPKLDETQTLGDLVKSLLLANSGRLMNEGLLNAVAAGHESNGEQRLLQHQQQQQQQQQLAAVAAFRRHIPKSETPETNSSLDANEMCEDPILKIPSFKVSGAGNISPPLLQHSMSSSNSNAISSRNGDHSPHSAASPMLAVAVAAAAANNSYRQQNSGGSSSGASNLLSPSPTSIQKMMATSIQRKLNEQSGQDSLRNNGNTSGSECSSSGGGGGGGSIAGNGSASNSGNSYKKPSISVAKIIGGTDTSRFGASPNMLAHQHQHQHHQQQQQQQQQLSAADAALGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKLNANLSGLGHLDKLKAGSSAAAAAANSSGSSSSSNNNNSSSSAGSKLSNALKNNSSTAAAVAAATAATSNGLKLAMFEAAPRMPFQFWTAPNAGANYGLDFNCNPDFLSHPGTVQMNEIDYAENMYGDIIRKTLKNENDAGNSVSGNGHGHAHSHGHGHALLDQLLVKKTPLPFTNNRSNDYSVAAAAAAVAAATACSSSAEGMKRPGSPMGAYADVKRERLSPMRSVESASSEEEHEHATSKNNNNNNNNNSDLAHNKNNSISNSNNNNNNGNSNNGNGRSRMTSRDSDTDGSSLKSEQSHSSAAAAANKMMDLNGSNSVKFEPEAVATAPISPSSSILHEKLAQIKAEQSDCNASEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00595168;
- 90% Identity
- -
- 80% Identity
- -