Drub009898.2
Basic Information
- Insect
- Drosophila rubida
- Gene Symbol
- kn
- Assembly
- GCA_035046165.1
- Location
- JAWNOF010000021.1:35714845-35728893[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-88 3.6e-85 286.2 0.5 41 182 115 256 94 256 0.96
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGTGTGGCCGAAATCGAAagtgcgacagcgacaacgacgacgacaacgattgCGAGTGCGAGTCTCGGTGCCACATTGGCCAAAATGACAGCGGGCATTCATTCCGTTCCGACGGCAAATcaaccacaccaacaacaccaacaacaacaacaacaacagcagcagcaacaacagcaacactcacacacgcatcTGAGTGCTCACAATCAGCAGAGACAGAGCAATTCGCAGCTTTTGCTGCACGACGAGGATAATCACAATCAGGATCATAATCACAATCAGACGCTAAGCAGTACTAACGATAAGATAATGCGCTGTGATGTGAGCCTGGGCATTGGCCGCGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTGCGCAAGTCGAACTTCTTTCACTTTGTGATTGCGCTCTACGATCGCGCCGGCCAACCCATCGAGATCGAGCGCACCGCCTTCATCGGTTTCATCGAGAAGGACTCGGAGTCGGATGCCACCAAGACCAACAACGGCATTCAGTATCGCTTGCAGCTGCTCTATGCGAACGGCGCGCGACAGGAGCAGGATATCTTTGTCAGACTCATCGATTCGGTAACCAAAGCGGCCATCATCTACGAGGGCCAGGACAAAAATCCAGAGATGTGCCGCGTCCTGCTAACGCACGAAGTGATGTGCAGccgctgctgtgATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTAA
- Protein Sequence
- MFAPRRSARVAEIESATATTTTTTIASASLGATLAKMTAGIHSVPTANQPHQQHQQQQQQQQQQQQQHSHTHLSAHNQQRQSNSQLLLHDEDNHNQDHNHNQTLSSTNDKIMRCDVSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00562257;
- 90% Identity
- -
- 80% Identity
- -