Basic Information

Insect: Drosophila rubida
Gene Symbol: JARID2
Assembly: GCA_035046165.1
Location: JAWNOF010000021.1:13585046-13593313[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.8e-22 8.1e-19 67.6 0.0 6 89 1947 2028 1942 2028 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.8e-22	8.1e-19	67.6	0.0	6	89	1947	2028	1942	2028	0.92

Sequence Information

Coding Sequence: ATGGTTGTCTCAAAAGACAACAAGCGTCGTCGCAAGGAGACAGAGACCCCGCCGACGTCATcttcggctgcggcggcggctacTTTGGCTGTGGAGTCATCACCTGAGATGCCTAAAAGAACGAAGGTGCAGGCGCAGCGCAAATTTGCACAGGGTCAGAGTGCACCCAGTTCAGCGGCAGCTTACAGTGCTgtagcagccgcagcagcagcggcgacggctgCAGCCGCGGCAACAGCGTCTGGTCCAAGCACTTCGGCAGCGGACAGCAACCATCAGCAACCACCGATTGAGATACTGCCCAACAAGTGCCCCAAGCCGGAGGATTTCTTAACATATATCTGCTTTCGTGGCACATCCGCATTACCCGCGCACTTGGACTATCTGAATCAGGGCAAGCCTAAAGTCAACGAAGTTGtcccgcccagcagcagcgccagcaaccaCAACGAAGTGAATAAGAAGaaaaccagcaacagcagtagcaaaaAGAAGAGGGGAAGACCCGCTAAGCCAAGTAATAAAGCTACCGACgagccactgcagcagcaacagcagccaaagcagcaacaatcgtTGGCATTGCAACCAACAAGGGAGAAAGCAGCAAGTGATAAAATTGAGGCAGCAACACCAACGCCGCCAATGCTGTTGGCGGGAGCAGTGCGCAAGCGGGCCGAGGTGATCACAGAGGGCAACCGACGTGGTTCGCGACGCAATGAGACATTGAAGCGACGCTCCAATCGCGCCAGTAACGCCAAGGAGAAAgaggaggagcaacagcagcagcggaaacAAACATCGGACGcccaggaggaggaggaggatgatGAGGACGAGTTTTTTAGTGCGCACGATGCGAGTTCACGCAATGGCGCTGCTGAGGAGACACAGTCCAAATCGGAGGCGACAGCGGCGCCAGGGAAACGTGGTCGCCAACAGTCAGCAGCCACCAGAAAAACTGCTGTCGCCTCGCCAGCTGTCACCGAGAGCAGTATCACCAAGGAGAAGGACAAAGAGAAGGAGAAGGCACCGGTGAAGCGAATGCGTCAACGTGAATCACCCATTTTTATACCATCACCTGAATCGTCAGGCCGCATGACGCGACAACGTGCTTTTTTTGAGCCAGTCAAGGTGGCGCCTAAGCAGCCACCGGACGAAGACGCCGAAGAGGAGCACGTTGAAGTATCGAAGCGAGCGGAGTCCAAGGAGAAAGAGAAGgaaaaagaagcaaagcaGCCGCCACTTAAGAAAGCTAACGACTCAGGAACTgtaagcaaacagcagcaacagctcagcAAGGAGAAGACAAACTCCAGCATTTATGCCAAAGATGctgccaagcagctgcagcagcagcaactggagaaCGGCGGCACGGCATCCGAAGTGGCCGCCGAACAGCAAAAGGCGCTCAATGTATTCGACTTTAGTTCAGACGACGAACAGCCACTGGCCAAGTCCATCAAGCTGAAAAAGGGTGCAAAAAAAGgttcagcaacaacaacaactgttgctgccacggCGCCAGCACGTGGACGAAAAGCCGCTGGAGGTGCAGctaagaagcagcagcagatgcaccaacaacaacagcagccaaaggaAGAGGAGAAGCTAGAAACTACGTCAACTTCGACTTCAACTCCAAACAAAGCAGAGGAGCAGCCTAAAGCGAAACGTGGCAAAGCgccgaaaaaagcgaaagcagcagaagcagaagatCAGCAAGACATTGATACCGAACAGCAGGAGGAAGAAGAGATACAGAGCGTTAGCAATCATAATACGCGTCCTGTGCGTCGCCAGGCGCAAGCCAAGGCCAACAAAGCTGCAGAGAAAGCGGCCGGAGGGGAGCGTTCAGTGAGTCCAAGTCCACAGCGAAGTCAGCGGCCATCGCGTAAAACGAAAGAGGCGGCTGCCATCTACATGGGCATCATTGGacacaagctgcagctggccgatgacgaggacgacgacctGTCGTTGAGCAGCTTTCCTGACATACCCAACGTCAAGGAGATGGAAAAGATGGAGAAGGAGATCAAGAAGAATGCGGCGGGGAAAACAGAGAGCAGACGGAAATCACCGAAGCCggcgacaacatcaacaacaacaactggaatagcagcagcaactgcggctACACTCGAGCCACCACCAGTAGCAGCAACCGTGGCTGCTGTGGAGCCAGCGACGGCGCCTgagacggcagcagcagcaacagctgcgccAAGACGCGGACGACCGCCAAAGCAGGCAAAAGGGGGAGCTTCGACGTCCACAGGAGCACCAACAGCCAAGCCTCAAATTGAGGGCATGCTGGTCAAGAAGGGTGCACTGGCGCTGGCCAAAGCAAAGTccgaacagcaacagcaacagcagaaacaacaacaacaacaacagcagcagcaccagaaccagcaacaaaaagacgATTCCGATGCGGAGGAGGATTTTTTAATCAACGAGGAgctaaacgaaacgaagcgcAAGCTGGAAAAAAGTTTTAGCGACTCGGATGATGAGCCGCTGGCCATCAAGGtgccaacggcagcgacagcagcaagcacaacagcaacaactacagccaaaggcggcagcggcagcaaagagggaactgcagctggagcaacaggagcagcacaGGAGTCAAGCAGCAGAGTGGCAGCAAGtggtgcaacaacaacaacaactgcagcagcaggcgcaggagtgccagcaactgcaggggcagtaacagcagcaaccacagctgGAGCAGTAGCTGTCacgactgcagcagccacGTTGAATAGCACGCCGCCCAAGCAACTGGCGTCTCTCTCCACACAGCTGGGTTTGGTCAGCAGCACAGCTGGGATAGCGACGACAACCACACAGTTGACCATGCTTCCACTGACGGCGAAACCCACAACACAGTTTTCGATATCGCCTCCAAGTTatgcgcctgcagctgcggctgccttgAAGACCATGGAGAAAAAGTCGCCGGTGCCCACGTCAAAGATACTGAATGTGCCTGCAACGTATGCGTTGCCTGGAGGAGCTGGAGTGGGTGCTGTGGGTTTCGCCAAGACCACTTCGTATTTGCCGCAGGCATCGCCACATTACCACACACCCTATGTGCGACCCTCAACGTTTGCGCCCGGGAGCAAGACACCGCAACAGGgcacagcgacgacgacgccggccAATGCGGTGAGCTCGCCACTGAAGTACCAGACGCCGCCAACAACTTATCCGCCGCCCATCGAAGCGTATCAGTGTCCCAAGATAAATCCTAATTTTCTGACGCCCAAGTACGATCGCAGCAGCGTCTTGCCGcgtgccaacaacaacaacagcattagcaataacaacgtcagcaacaacatgaatAACAGCTTTAGCTCGCCACGTGCCACACTGGGCAGCCTGGGTGGcacagttgttgctggttcCGTCGTGGCCCCAGTGAAAAGTGTGCTGCCTCCACCGACTGTTGTTAGTCAGGCACAAAGTCTTAATCTCAGTTTGACCACCGTGGCGTCTACttccgcagctgctgcggccgctgtccaacaacagcagcagcagcagcagcaacaacagcagcagcatcaacaacaacaatcggtgccacagcagccgcaaccgcAGCTAATTGCGACACCCGTGTCCACAAcgcagccaacagcaaatgctggagcagctgcagccaccgTTGATACACTGAAGGATGAAATTGGCAGCATATTGGCGCAGGCGACGCTCATGCCCAGCAAGGAGGAGTCGGGCAAGATCTTTGGCATTGCCAGCGTCAGTTTGGCGCAAAGTTCCGGGCCGGACAACACCAAATGCACGCTGGGCAAGTGCGGCTCCATACATAAGCCAGTGCTGGGTCCTGTGGTGCCCACGGAGGGTTATTTTGGTGATCAGCTCACTAGCAAGGAGCGACGCAAGGCTAAGGTGAATATGACGCACGAACAGATACAGAAGTGGCTCATCGAGTGCAGCTCCAATCCCGACGAGATTCAGGATGATTTGGACGATGAGTTCGACGAGAGCCTGCGGCCGCAGCAAGCGCAAACACCGCCAGGACCGGCGACACGAGATGACAAGGAGAGCACCAGTTTCAGCAGTTCCTCGAATAAGACGCGCGGCGAACTAGGCAAAAGCGAGAGCGCCTGGTCCGCCAAGGGGCCATCGCTGAAGGCAACCCCAGTGCTGGTGAGCCAAGCAGCGGCTGTAGCAGCCACAAGTCTGACAGCTGGCAATCGGAGCAAAGAGACGGCGGATAATGAATCGGACGCACTGGACTTTGACAAGTGCGTGACACCGGTGAATCTCACGCAGAAGTCGGAGGACAAAAAGTTGACGGAGAAGAAAGCCAAGAATGCCAGCGGCCACAGTGCGggaacagcaactgctgcgccAGTAGCACTCCCAGTGgccagagcagctgcagcgggcagcaaacgcagcgcagctgcagcagcggccgctTCAAGCATAGCAAGTCCAACGCCCAGCAAAACTAAGGCCGGCAACAAGAAGCAAGCGAATGCAGCAGCCAAGCTAACGGCGACGCCGCCacctagcaacaacaatgccgccacgcccaccacacCTGCAAAGCGCACACCCATCTATCAGAATcagagcaacaagagcaacaaggcGCAAACACAGCTGGACAACAAGCTGGagaagcagctggagaagcagcaggagaaacagctgcagcagctttcaGAGAAAAACACGACGTCGGTGTACGCTTTTGGCAAGGATGAGgatacagctgcagcaacaacagttacCGGCAAAGCGACAAATCGCAGGCGGAATGCAGACAAAGCAGACACCGATGTGGtagcaacaccagcagcggcagcaacgccGCCACCAGCGCTCAGCGAGCGTTCGCCAACGAAAAAacgtgcggcagctgcagcagccgcaacagcagtgCAGCTGACGTTAAGTCCAACAGATAAACTGGAGAAACCCAaggcgacagcggcagctgcgcgCCAAGCCAAgaaacatcagcagcagcagcagcagtcggagaagcagcaacagcaaacggaCAAGCAACTGTCGCAAACAAGTCCAGTTGGCTCCGATGCTGAGGGCGCCACCTTCTACATACCGCTGCTGCAAggcgccagcggcggcggtgaTGGCGGCATCCAAGGCGTTGCTGTGAAACTGGGACGTGAGGGCCCCGATGGGCCCAATCAAAAGGTCGTGATGCAGGCGACGCTGGTGACCAAAGCTCAAATGGACACCAATTCGAAGCCATTGCCCGACAATGAGCTGGTGAAAACACTACTGAATGCAGCCACCACCACGGGCAAcgatgcaactgcagcaacgacCTCAGCCACTGGCAGCAATAGCTTGAAGGCCAGCACCtcagtcgcagcagctgctgccacaagtTTGGTGCGCGTCAATTCCAATTCATCGCTGTTCTCTGGTTCGGCCAAGtcgagaacagcagcagcagcagccacaactgcaacaacagctgccaacGCTGCGTTGGCCAAGAAGTACAAGGATGACACACCGATTAAAATGGCCAACAATACGGCATTTCCACGGCACGATGATCCCACGCAGATGGTCGAGGCGCCCATTTTTAAACCCACCGAGAAAGAGTTTGCCGATCCCATTGAGTTTATCGAGCGTATCACACCGATTGCCGCACGCTTTGGCATCTGCAAGATTATACCGCCGGCTAGCTTCAAGCCCGAGTGCCGCATTTCGGACGAGATGCGTTTCACGGCATACAATCAGTACGTGCACAAGATGCTGCATCGTTGGGGTCCCAGTGCGAAGGAGCTGAGTGCCATCAAAAAGTATTTGGCCACCCAGAGCATCATGATGAATCATGCGCCGTGGATCGGTGGCATGGAGGTGGACCTGCCGCGTCTTTACCACACCGTCCAGGAGCTTGGCGGCCTCAAAGAGGTCATCGAGAAGAAGAAATGGGCGCGCGTTGCCGAAGAGATGTGCATACCGAAATTGGCGCAAGATCGTGTCACCAAGCTGGATGACATCTACTGCAAGTATTTGTTGCCCTATGACACATTGTCGCCTGCCGAGCGACAGAAGCTCTTCGACGAGGTCGAAGCCGACTGGGCCAAACGTGAGGCACGCGCTCGTCGCAATGCGGATCGATTCGTGAACAGCACGGAGAGCGTATCGAACGAAGAGGATGATGTGTCCACCGATGAAGATGAAGAGTCCGAGGAAGAGATTGATGGCGTGTCCATGGAATGCATTGTAAAGGGACGCAGCATGCCTCTCAGCCAATTCTATCGGATTGCCCGCAACACTATGGCGCTGTGGTTTAAAAGCACTGATCCCACCGTTAACGAAGTGGAGGCTGAATTCTGGCGCCATGTCGCCGTGCGGGACAGTCATGTGTGCGTGCACTCCGGGTCCATTGATAGCTCCGGCTGGGGTTATGGTTTTCCCAGTCCCGGACCCAAAGGCAAGGGCTCGAATTATGCGCGACATCCGTGGAATCTCAAGGTGTTGACCAATAACGCCGGGTCAGTACTGCGTTCCCTGGGACCCGTGATGGGTGTGACGGTGCCCACGCTGCATGTGGGCATGCTATTCTCAGCCTGCTGTTGGTATCGTGATCCACACGGGCTGTCGTGGATTGAGTATTTGCATACGGGTGCTTCGAAACTGTGGTATGGCATACCCGATGATCAGAGCGCGAATTTCCGCTCTGCGTTGACGTCGTTGATTCCCACGCATTGTCAGAACAAGACGATCTGGTTGCCCTGTGATACGGTAATGGTGCCGCCGCACATGCTTACCGACCGTGGTGTCTCCCTGTGTCGCATCGAACAGAAACCTGGCGAATTTATTGTAGTCTTTCCACGCGCCTACACTTCCAGTTTGGCTACCGGCTATGTGGTTTCGGAGAGCGTTTATTTCGCCACCATGTCATGGTTGGACTTGGCCAAGGATGACTTTAGAGACATTCATGAGAGCTGTGAGCCGGCAATGTTCTCTTTGGAGCAGTTGCTCTTTGCCTTGGGCTACGATCAACGCGTCAATTCGGACACATTGCAGCAAATGCTGCCCATGCTGAACGAGGTCTGCGAGAAGGAATCAGCAGCGCGCGAGCAGCTGAGGGCCGCTGGTGTCACGTCCACGGAAAAGGTGCAAGCTGAAAAGGGCCAAAAGGcgaagaagcaacagcagccaccgTACAAGTCTATCGAGAGTGAATGTGATCTGTGCCGCGCCAATCTGTACATATCGATGGTCCGCACCGAGGAGGGCAACGTTTACTGTCTGCAGCATGCGCTCAAAAATCtcaacaacggcaacattCAAGCCAAGCAATGCAAACTGATTTATGCATACAATGTGGACGATATTCTGCAGCTTATACGACAGCTGCAGGATAAGATCCAACACAAGCAGGCGGTGAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETETPPTSSSAAAAATLAVESSPEMPKRTKVQAQRKFAQGQSAPSSAAAYSAVAAAAAAATAAAAATASGPSTSAADSNHQQPPIEILPNKCPKPEDFLTYICFRGTSALPAHLDYLNQGKPKVNEVVPPSSSASNHNEVNKKKTSNSSSKKKRGRPAKPSNKATDEPLQQQQQPKQQQSLALQPTREKAASDKIEAATPTPPMLLAGAVRKRAEVITEGNRRGSRRNETLKRRSNRASNAKEKEEEQQQQRKQTSDAQEEEEDDEDEFFSAHDASSRNGAAEETQSKSEATAAPGKRGRQQSAATRKTAVASPAVTESSITKEKDKEKEKAPVKRMRQRESPIFIPSPESSGRMTRQRAFFEPVKVAPKQPPDEDAEEEHVEVSKRAESKEKEKEKEAKQPPLKKANDSGTVSKQQQQLSKEKTNSSIYAKDAAKQLQQQQLENGGTASEVAAEQQKALNVFDFSSDDEQPLAKSIKLKKGAKKGSATTTTVAATAPARGRKAAGGAAKKQQQMHQQQQQPKEEEKLETTSTSTSTPNKAEEQPKAKRGKAPKKAKAAEAEDQQDIDTEQQEEEEIQSVSNHNTRPVRRQAQAKANKAAEKAAGGERSVSPSPQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEDDDLSLSSFPDIPNVKEMEKMEKEIKKNAAGKTESRRKSPKPATTSTTTTGIAAATAATLEPPPVAATVAAVEPATAPETAAAATAAPRRGRPPKQAKGGASTSTGAPTAKPQIEGMLVKKGALALAKAKSEQQQQQQKQQQQQQQQHQNQQQKDDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTAATAASTTATTTAKGGSGSKEGTAAGATGAAQESSSRVAASGATTTTTAAAGAGVPATAGAVTAATTAGAVAVTTAAATLNSTPPKQLASLSTQLGLVSSTAGIATTTTQLTMLPLTAKPTTQFSISPPSYAPAAAAALKTMEKKSPVPTSKILNVPATYALPGGAGVGAVGFAKTTSYLPQASPHYHTPYVRPSTFAPGSKTPQQGTATTTPANAVSSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYDRSSVLPRANNNNSISNNNVSNNMNNSFSSPRATLGSLGGTVVAGSVVAPVKSVLPPPTVVSQAQSLNLSLTTVASTSAAAAAAVQQQQQQQQQQQQQHQQQQSVPQQPQPQLIATPVSTTQPTANAGAAAATVDTLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLTSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDEFDESLRPQQAQTPPGPATRDDKESTSFSSSSNKTRGELGKSESAWSAKGPSLKATPVLVSQAAAVAATSLTAGNRSKETADNESDALDFDKCVTPVNLTQKSEDKKLTEKKAKNASGHSAGTATAAPVALPVARAAAAGSKRSAAAAAAASSIASPTPSKTKAGNKKQANAAAKLTATPPPSNNNAATPTTPAKRTPIYQNQSNKSNKAQTQLDNKLEKQLEKQQEKQLQQLSEKNTTSVYAFGKDEDTAAATTVTGKATNRRRNADKADTDVVATPAAAATPPPALSERSPTKKRAAAAAAATAVQLTLSPTDKLEKPKATAAAARQAKKHQQQQQQSEKQQQQTDKQLSQTSPVGSDAEGATFYIPLLQGASGGGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPDNELVKTLLNAATTTGNDATAATTSATGSNSLKASTSVAAAAATSLVRVNSNSSLFSGSAKSRTAAAAATTATTAANAALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIMMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNEEDDVSTDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLQQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMVRTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDILQLIRQLQDKIQHKQAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -