Drob019723.1
Basic Information
- Insect
- Drosophila robusta
- Gene Symbol
- pnr
- Assembly
- GCA_004143805.1
- Location
- SCDV01001009.1:42993-46459[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 8.8e+03 -3.0 4.3 1 7 464 470 464 485 0.65 2 2 6.5e-18 2e-14 53.5 7.7 1 34 515 547 515 549 0.97
Sequence Information
- Coding Sequence
- ATGGAAGCGCAACCGACGcctcagcaacagcaacagcagcaacagcaacagcagcaacagcaacaacagcaacaactgcaacaacagcaacaagtgctgagcaagcagcagctgcaattgctagataaaatcaaaatcgagACAAGCAACGGCAACGATCCACAGGCCAACAGCGTGCTGGAggagcaacaggagcagccaCCCACAACAGTCGGCGTTCTCGTGCAGACGAACAGCCAGCCGAGCGAAtccgaggagcagcagcagacccAGTATGTGGTAGTGCCACGCACCCAGCAGCGACGCATCCTGACCACGGCGGGCACACTCGAGGTGAACGAGACACGCGAGGGCGAGCagagcaccaacaacagcagcagcgccagctccaaTTCGGCGCCCGAGGCCCACATTGAGTATCAGCGGAGCTCGCACCACTCGCCGCACTACATACAAATGGCGCCGCGGAATGCGGCCGAGGTGGCCGAGCAGGTGGCCAGCGCTCCGCCCGGCACGATCTATACCTACAGCTCGGGCCAGCTGCTCTGCGGCGACGATGGGGCGCCCATCAAGCTCGAGACGATCGACAAGAGCGATCTGCCTGGCGAGGCTCAGGCGCAggcgcaacagctgcagcagcacgcacaccagcagcagcagcaacagcagcagcagcagcagcagcaatgcccTACGCCCAATGGTGGACCCTATGGTGATACCATTGTGGTCAGCAGCGAGGCGGCATTacagcaccatcagcagcagcagcagcagcaacatgcggcagccgctgcagcagcagtgcaggcggcagcagcagttgccgccCACGGCCCGAGCGTGCGCTACGTGACGGAGGATGGACgctttgccacgcccagcggCGATGCGGAGGCGCACAGCGCCAATCTGTACTACGATACGTCCGTTGTGGATGCCAGCGTGCATCCGAACGAGTCGAAGACATACGCGGATTTGGGCACCGCCGCCTACGGCTTCCCGTCCAACTCCAACTTCACCAGCAACAGCTACGCGGCGGCCACGCTCCAGAATCCCAACTCTATTTACGGGGTGCCGTCCTCGACGCAGTTCATAACCAAATCGGATCCGAACCTCAATTTGAGGCAAGGGCCCGGAGGTACGTATCACACGATATCCTACATGGAGGGCGCCAATGGCACCGATGCGGGTATATGGACGACCGCCGCGGCCGAGTATTCGAACGTGTCCTTTTCGAACTATCATTCGCAGGTGATCGACGAGTATCCCACGGCCAACATGAGCACCGGCCACTGGGCGACAGCTGGCAGCATTGGCAACTATGATCCCGGGCTGGCGGCGGCGAATGCCACGCCACCCGCCACCCATGGCCAGCAGGAGATCAAGTGCGAGAACTGTCAGACGCCGTTCCTCCGCAAGGGCACGGAATGGCCCAATTGTCCAAATTGCTATGGGCGCCCGATGTCGGGTCGCGTTCAGCCACAGCGCCAGAAGCCCAAAGCAGCCGCTGCGCCCAACAATCGCCGCAATGGGGTCATCTGCGCCAACTGCCAGACAACCTCGACGACGCTCTGGCGGCGCAACAACGAGGGCAATCCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACATGAACCGCCCGCTCTCCATGAAGAAGGACGGCATACAGAAGCGCAAGCGCAAACCGAAGAACAATGGAGGACCCATTCCGCACCGGGCACTGCCAAGCATGGCACAGGGTGTCAATTTGATGGTAAACGGCGGCACGTTGTATCCATCGCAGGTGCCAGTGGGATTGCTGAACAGCCAACAGAGTGATAGCTCCGAGCTCCACGATATGTCCACAACTGGCCCCGCTGGCGGTCCACGAGTATTGACCATCGCCATGAACCACACTGCGCCCGTGCCGACTTCCGATGGCACGTTGAACATGTCCCGTCATCATGTGACCAGTGAGAGCCACTCGCCctacagccagcagcagcagcagcagcaacagcagcagcagcaacagcagcagcaacagcagcagcagcctccgTCACAGAGTCAATCGCCGCTTCTGCCCAACTCGACCACGTTGAACCGTCAGATTGCACAGTCTGTTCCTCCAATCGAAAGTGGGCGCAGCTCCAACAGTGAGCTGACTCCAAGCGTCATAACGCGAACAGGGCTGCCGGAACGTTCGTCGAATAACTAA
- Protein Sequence
- MEAQPTPQQQQQQQQQQQQQQQQQQLQQQQQVLSKQQLQLLDKIKIETSNGNDPQANSVLEEQQEQPPTTVGVLVQTNSQPSESEEQQQTQYVVVPRTQQRRILTTAGTLEVNETREGEQSTNNSSSASSNSAPEAHIEYQRSSHHSPHYIQMAPRNAAEVAEQVASAPPGTIYTYSSGQLLCGDDGAPIKLETIDKSDLPGEAQAQAQQLQQHAHQQQQQQQQQQQQQCPTPNGGPYGDTIVVSSEAALQHHQQQQQQQHAAAAAAAVQAAAAVAAHGPSVRYVTEDGRFATPSGDAEAHSANLYYDTSVVDASVHPNESKTYADLGTAAYGFPSNSNFTSNSYAAATLQNPNSIYGVPSSTQFITKSDPNLNLRQGPGGTYHTISYMEGANGTDAGIWTTAAAEYSNVSFSNYHSQVIDEYPTANMSTGHWATAGSIGNYDPGLAAANATPPATHGQQEIKCENCQTPFLRKGTEWPNCPNCYGRPMSGRVQPQRQKPKAAAAPNNRRNGVICANCQTTSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKDGIQKRKRKPKNNGGPIPHRALPSMAQGVNLMVNGGTLYPSQVPVGLLNSQQSDSSELHDMSTTGPAGGPRVLTIAMNHTAPVPTSDGTLNMSRHHVTSESHSPYSQQQQQQQQQQQQQQQQQQQQPPSQSQSPLLPNSTTLNRQIAQSVPPIESGRSSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00598542;
- 90% Identity
- iTF_00598542;
- 80% Identity
- -