Basic Information

Insect: Drosophila robusta
Gene Symbol: -
Assembly: GCA_004143805.1
Location: SCDV01000325.1:11682-13298[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0001 0.013 16.5 0.1 1 23 289 311 289 311 0.97

2 5 5e-05 0.0062 17.5 3.7 1 23 317 339 317 339 0.98

3 5 0.00072 0.091 13.8 3.6 1 23 345 367 345 367 0.99

4 5 7.4e-05 0.0093 17.0 1.5 1 23 373 395 373 395 0.95

5 5 2.1e-05 0.0026 18.7 2.3 1 23 401 425 401 425 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0001	0.013	16.5	0.1	1	23	289	311	289	311	0.97
2	5	5e-05	0.0062	17.5	3.7	1	23	317	339	317	339	0.98
3	5	0.00072	0.091	13.8	3.6	1	23	345	367	345	367	0.99
4	5	7.4e-05	0.0093	17.0	1.5	1	23	373	395	373	395	0.95
5	5	2.1e-05	0.0026	18.7	2.3	1	23	401	425	401	425	0.93

Sequence Information

Coding Sequence: ATGGATATTGCAAACAAGACGCCGGCGGACAAAAGCAAATGTCGTGTTTGTCTGGACGAATGCGAGGAAAGCACGATGCAAGCGCTTTTCACAGTGGATACCGATTTAAATGACGCAGAGAATGAGGAATCGGACAACGCCGCCTATgacaaaaatcatttaaacaGTCGAATTGAGAACTGTTGCGGGATTAGAATTCGCCGATCGCTGAATTTGCCGTCGAAGGTATGCGAACGCTGCTGCGATTTTGTGCGCATGTGGTACAGCTTCCGACAGATGTGTCTCAAGTCCCAGGTGTACTTGGAGAGCACGTTTGTGCGTGACGAGAAGCCAGACGATCTGATCGACGCCAGCGACAGCGAGTATATGGAATATCTGTACGAGACGCTGCAGTTGCAAACGCTGGAGCACAACCAAACGAAGGAGGAGCTGGAATCTGTTGGCTACCCGGAAATGGAGAGCGACTATGTTGTGGACTATGACGATGATAGCTTTGTGGCAGAGGCTGTGCCGCCCGTCGAGTGCCAGGAGGAGCGCTCGGATCATCATCTGCCGGAAATCATAGAGATGGAGTCGTATGAAACCGATGAGGGCGAACCCATCGAAGTCGAGCAGACTCTCATTTATGCAGATAATAGCCAAACAGCGGACGATTCTTTGGTGGAACATTGTGATGTCGATTTTGCCGATGACAACGACGACTTCTTATCGCCAACGCCATCGCCGGACCCAAAGCCCAGCACGACAGTTAAACGCAGACCGGGAAGGCCGCGCAAGCCGGACAGCGAGCTAAAGTCGAAGCGAAAGATTAAAAGCCAAACGCACTCGAAAGCCCAGCAAAACTCAGAGGATGCACCAACGAAATACATGTGCAATCTCTGCGGCAATGTCTATCCCAAGAAGGCTGCGTTCACGGCCCATATGATGGCACACACCGACTACAAGCCGCACCAATGCGAAATCTGCTGCAAGTCCTTTCGCCAAATGGGCGAACTGCGCGCTCACATCCGCCGGCACACTGGCGAGCGGCCCTACAAGTGCTTATATTGCGAGCGGCATTTCTACGATCGCAGCGAGAAGGTGCGCCACGAGCGGGTGCACACCAATACGCGGCCATACGAGTGCAAGGAATGCGGCAAAACGTTCACGCACACGGCCATTCTCAAGAATCACAGCCTGGTGCACTCCGGCGAGAAGAATTTCAActgcaacatttgCTCCAAGTCATTCACGCTGCTCCATCAGCTAAAGGCCCATCTGCAGACGCTCAcgcacaaaagcaaagagGAACAAGcgtttgccagcagcagcagctacataCTGCGCCAGGACCATCTGGAATAA
Protein Sequence: MDIANKTPADKSKCRVCLDECEESTMQALFTVDTDLNDAENEESDNAAYDKNHLNSRIENCCGIRIRRSLNLPSKVCERCCDFVRMWYSFRQMCLKSQVYLESTFVRDEKPDDLIDASDSEYMEYLYETLQLQTLEHNQTKEELESVGYPEMESDYVVDYDDDSFVAEAVPPVECQEERSDHHLPEIIEMESYETDEGEPIEVEQTLIYADNSQTADDSLVEHCDVDFADDNDDFLSPTPSPDPKPSTTVKRRPGRPRKPDSELKSKRKIKSQTHSKAQQNSEDAPTKYMCNLCGNVYPKKAAFTAHMMAHTDYKPHQCEICCKSFRQMGELRAHIRRHTGERPYKCLYCERHFYDRSEKVRHERVHTNTRPYECKECGKTFTHTAILKNHSLVHSGEKNFNCNICSKSFTLLHQLKAHLQTLTHKSKEEQAFASSSSYILRQDHLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00530478;
90% Identity: iTF_00598417;
80% Identity: -