Basic Information

Gene Symbol
RERE
Assembly
GCA_004143805.1
Location
SCDV01006898.1:98-4953[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-07 0.00012 22.7 0.2 2 45 125 169 124 170 0.87

Sequence Information

Coding Sequence
ATGGCGGCCTCCACTCAAGGAGAAATACGAGTGGGTCCCGGCCACCAGGTAAACGATGTCTATGCAAAACTGCCCGATTATAATCCAATCTCAAGCTTCCCCGTTGACAAGGAAATCGATGAACGTGAACTAGAGGAAACAAGATGGAGTCCTGGCGTTGTGGCCGATGGCGACTTGTTAATGTTTCTGCGTGCGGCACGCTCCATGGCTGCATTTCAAGGAATGTGTGATGGCGGTTTAGAAGACGGTTGTTTGGCTGCCAGTCGCGACGACACAACAATTAACGCACTCGACGTGCTACACGATTCTGGCTACGATCCAGGCAAAGCTCTACAAGCGCTCGTAAAGTGCCCCGTTTCAAAGGGCATTGACAAAAAGTGGACCGAAGACGAAACGAAAAAGTTCATCAAGGGTCTGCGCCAATTTGGCAAGAATTTCTTCAGGATCCACAAGGACCTGTTGCCACACAAAGACACACCGGAACTGGTCGAGTTCTACTATCTGTGGAAGAAGACGCCCGgcgccaacaacaatcgcCCGCACCGGCGACGCAGACAGAGCGCCTTGCGTCGCAATCGTGTCACGCGCGCCAACAATACACCTCCCAAAAAGGAGGACACCCCGGAACCACAAGctgcgacgacggcgacggcggcggcgtcggctgCAGAGACGGCGAATCGCTCATCGCCCGCTGTCTCCAAGGAGGAGAACAGTTCTCTAACCGAGGACGACGCCAGCGAGTGCGACAGTGATTCGAGTCTGACCAACAAAAGGGATGAATCACCCTCTAGGATGAGGACgcgcaacaaacaacagaacaacaacaacaataataataataataataacaacaacaacagcagcagcagcagcagcagcgccagtgcagctggtggcggtggcaactccgctgctgctgcctccgcGAACGCCTCTGCCAACAGCTCCGCCAAGGATCAGTCCGCAGGCTCagcgagcaacaacagcaacgccgTGGCGAACGGCAAACGGCCCAAACGCGGCTCCGATACACCGGATGCCggcgcggcggcagcggcagcagcagcagccgccgccgccgccgcagtcgctgctgctgctgctgctgctggcgacagTCCCAAGACGCCCACGAAGGGCGTGGCCGAGGGATCGGGCAACAAGCGCAAGGGCGGCAAACAGGACACGCCCAACAAGAAGAAACGCACCGAAACGGagaccaacagcaacaacagcaacaatagcaacaacagcagcagcgagcagcCGAACAACAGCACCGAGGACACCATCAACATCAAGGAGAAGCAGCGCAAACGTCCCGACAGCCCCGTCGAGAGCATGAACTCCGACAGCCGGCCCGACTCCGTGCTGGACGATGGCGAGTCGAACACAACGGACACGGACGGCCGCAACGCGGAGCAGCAGTCGAGCAAGGACGGCAAGGAGATTAACTGCAAGGAGGAGAGCGCCGTGACGCTGTCGAATGAACTGGACGCCAAGTCGGAGCTCAGCGAGAAGTCAATCAAAACGGAAACGTCCAGCGCCGAAGACAGCAAAGATGCCATCAAGAACATGGACGAGGAGACCAACATCCAGGCGCCCACCAGCATACAGCCGCTCGGCCTGAAGCCCGCCCACGTGGACGGCCTGCTCAAGGAGTCCAGCTCGCTGGAGGCGCCGCCagctgtcgccgtcgtcgcGCCCATTGCCATGAAGGTGCCCACCATTGCCACCGTGGAGGCGCTCAACGCCTCCGTCGACCGCGACCGCAAGGACACCATCGAGAAGATGGAGATATGCGAGAGCGAGGCGGCGACACGTGATCCCGAGCTGCTCAAGAAGCTCGCCAGCATCAAGCAGGAGGCGttgccccagcagcagcagcaacagcagcagcagcagcaacaacagcagcagcaacagcagcaacaacagcagcagcagcagcaacaacagcagcagcaacaacaacagcagcagcagcagcaacaacagcagcagcagcaacaacagcagcagcagcttgtggGTGTGCCGCCCGTGTCCGTGGCCTCGGGGCCCATGCAGGAGACCGTTTACATCAAGAAGGAGCCCATGGAGGACTCCATGGACGCCACTTGCAATCAGAACAGCAATGAGCCGCAGGATCTCAAGGTCAAGATCGAGATCAAGAACGAGGATCTGAAGATCAATGCCGGCGGCATGCCGCCAGTCAGCTCCGCGGGGCCGCCGCCCAACGCCCAAATGGGCGGCATGCATCACGGCCCCGGCGATGGCGTCAATGCGGAGTCACTGCATCTGCAGCATATGACGCACGGGCCGACGCCGCAGGTGCCCGCCGGCTATCTGATCGACGGGCAGCTGAAGTACGGACCGCCCGgacagccgccgccgcagccgccgccacaGCTGCACAGCGACccgggcagcggcggcggtggaggcggtggcggtggcggaggCGGAGTCGGTTCAGTTGGCGCGCCTCAGAAATATCCTGGCGATATGGAAATGAAGTACAACGAGGCGGCCGTCAAGTTTGAGGCCAGCGGCGGCAAGTTTGCGCCGCAGGAGCTCAAGTATccggtgccgccgccgctggacGCGCTCAAGTACAGCCAGGAGATGCAGGCGGCGGCCGCCGCGGCGGCAGCCGTCGGCAAGTACGACATGAAGTACATGATCGAGCAGCAGGGCAAGTATCCCGTGGAGCTGGTGCCGCCGAAGCCGGGCTACCAGGAGGCGCTCAAGATACCCGACGTCAAGCCGGGCTTTGCCCATCTGCCGCACAACATTGGCTCGCCCCTGGACGGTCCGCCCGGGCCGCACAAGTACGTGCCGGCCGCGCAGCCCGGCCCGCCGCTggaccaacagcagcaacagcagcagcaacaacaacaacaacagcagcagccgccgggcgcgacgccgccgccgggcaTTGCCATGCCGAAGCCGCATTATCAGCACGATGTGCAGACGCCGCCGCTGGGTCGGCCCTTCGAGCCGGCCGGGCTGATGCTCAAGTACGGTGATCCGTTGGGCGCCAAGTATGGGCCGCCACAGCCGCAGGATCTGAAGTATCCGATGCCGCCCGTGTCGTCGTCCGCCGGCGGCGAGAATCTGATCAAGGCCTCGCCGTACGGCCCGCCGCCGGAGAGTCCCATCGATGCCTCGGCGCGCTCGACGCCCGGCCAGGACAGCcagggcagcaacagcaacagcaactcgCAGCCACCATCCTCACAGCCGCAGCAGTTCCAGTCGCCGCATCCCTCGCCGCACATGCCTTcgccagctggcggcggccTGCCGCCCGGCATGCATCCGCAAAATCTCATCTCCCCGCACAGCCACGGACCGCCGCCGAACTCCGGTGCCGGCTCCGTTTCCGGTCCCGGTCCCGGACCTGGACCCGGACCCGGGCC
Protein Sequence
MAASTQGEIRVGPGHQVNDVYAKLPDYNPISSFPVDKEIDERELEETRWSPGVVADGDLLMFLRAARSMAAFQGMCDGGLEDGCLAASRDDTTINALDVLHDSGYDPGKALQALVKCPVSKGIDKKWTEDETKKFIKGLRQFGKNFFRIHKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQSALRRNRVTRANNTPPKKEDTPEPQAATTATAAASAAETANRSSPAVSKEENSSLTEDDASECDSDSSLTNKRDESPSRMRTRNKQQNNNNNNNNNNNNNNSSSSSSSASAAGGGGNSAAAASANASANSSAKDQSAGSASNNSNAVANGKRPKRGSDTPDAGAAAAAAAAAAAAAAVAAAAAAAGDSPKTPTKGVAEGSGNKRKGGKQDTPNKKKRTETETNSNNSNNSNNSSSEQPNNSTEDTINIKEKQRKRPDSPVESMNSDSRPDSVLDDGESNTTDTDGRNAEQQSSKDGKEINCKEESAVTLSNELDAKSELSEKSIKTETSSAEDSKDAIKNMDEETNIQAPTSIQPLGLKPAHVDGLLKESSSLEAPPAVAVVAPIAMKVPTIATVEALNASVDRDRKDTIEKMEICESEAATRDPELLKKLASIKQEALPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLVGVPPVSVASGPMQETVYIKKEPMEDSMDATCNQNSNEPQDLKVKIEIKNEDLKINAGGMPPVSSAGPPPNAQMGGMHHGPGDGVNAESLHLQHMTHGPTPQVPAGYLIDGQLKYGPPGQPPPQPPPQLHSDPGSGGGGGGGGGGGGVGSVGAPQKYPGDMEMKYNEAAVKFEASGGKFAPQELKYPVPPPLDALKYSQEMQAAAAAAAAVGKYDMKYMIEQQGKYPVELVPPKPGYQEALKIPDVKPGFAHLPHNIGSPLDGPPGPHKYVPAAQPGPPLDQQQQQQQQQQQQQQQPPGATPPPGIAMPKPHYQHDVQTPPLGRPFEPAGLMLKYGDPLGAKYGPPQPQDLKYPMPPVSSSAGGENLIKASPYGPPPESPIDASARSTPGQDSQGSNSNSNSQPPSSQPQQFQSPHPSPHMPSPAGGGLPPGMHPQNLISPHSHGPPPNSGAGSVSGPGPGPGPGPG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-