Drob003711.1
Basic Information
- Insect
- Drosophila robusta
- Gene Symbol
- rca-1
- Assembly
- GCA_004143805.1
- Location
- SCDV01003936.1:4257-6031[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-16 7.7e-13 48.9 0.1 1 46 185 234 185 234 0.94 2 2 1.8e-15 2.1e-12 47.5 0.5 1 43 240 282 240 283 0.95
Sequence Information
- Coding Sequence
- ATGCTAGGCCCCAACGGATACCCTTGCTACCCTTCCCAACAGCAGCCGGCCCAAGCACAAACACAGGCCCAGGCACAATTGCAGGCCCAACACCAGGCCCATCTACAGGCGCAACaccaggcgcaggcgcaggcccAAACCCAAGCCCATATCCACATGCAGGCCCAGCAGAGCCAATTGATGGGCCAGCCAATGGTGTCGCCGTTGTACCGACCTTATCCACCGCAGCTCGGCTATCAACCGTTCTATGCCCAGCAACAGGGCCATCAACTCTCACCACCTCTACCACccccacagcaacagcagcctcGTCCACTGCCACCCCTCCATTCGACCTTTGCCTCACCCAACATGGTATACCACAACTCCACCCCAATGGCCCCAGCCTCAAACATGAACCCCATGAACCCCGTTGCAGACCCAACTTTGAATGGCCCCAACACGATGAACGAAAACATCGGCATCAACAACACCAACGAATTTCTAAACAAACACGAGACAAAACACCATCAACAGCAGATGCAAAACAACTCCTCCTTGTTCAAATTGCGCCGTGGCCCATGGTCCCCAGAGGAAGATAAACATCTACTCGAATTGGTGGCAATGTTCGGTGgggaaaaaaatttgaattgggTCAAAATTTCCCAAATGCTTGAAACCAGAACGGCAAAACAGGCTCGTGAAAGATACCACCAGAACTTGAAACCCTCCTTGAACAGAACCCCAATCACACCTGAAGAGGGTGAACTGATTGAAGAGTTGGTGGAAAGATACGGCAAACGCTGGGCCGAGATTGCACGCCACCTGAATGGTAGAAGTGACAATGCAATCAAAAATTGGTGGAACGGAGGTGCTAACAGAAGAAAGAGACTGATTGATAGGAAAAATACCACAACTAACAATAAAACAGAAAGTGACGAAAACGGAAATACAACTAGTGACAACGCAATGGAAATGGAACCTGAAAACGAAAGGGATAATGACGTTGAAGATGACAAGAAACAAAACGACAAATCAGATGAGAAACAAAAGGAGCAGGTCGATGTTGACGTTGGTCCCCATGAAGCACCATCCGAAAATCAGGCTGGTGAAGCATCTGACAAGGTCAAGGTCAAGGAAGAGCTCAAGCCATATCCGCTGACAACAAACAGCTCGAATAACTCGTTCAACCATTTGAATTTGCTTCCGCCACAACATTCCAAAAGACGGAGTGCATCTGTTGACTTCAGACTACCGCCAATCAATCCAGGCTCGCAACAAACTTCTCTGAGTGGCTTGGTCTTCGACACTGGAATCATTGGCAAGTTCTCCACGCGTTGGATCGAGAAGTTCCAGGGCGTCCTCAATTGGCAGTGGAGATCTTCTGACAAATTCTCTGAGTGGTGA
- Protein Sequence
- MLGPNGYPCYPSQQQPAQAQTQAQAQLQAQHQAHLQAQHQAQAQAQTQAHIHMQAQQSQLMGQPMVSPLYRPYPPQLGYQPFYAQQQGHQLSPPLPPPQQQQPRPLPPLHSTFASPNMVYHNSTPMAPASNMNPMNPVADPTLNGPNTMNENIGINNTNEFLNKHETKHHQQQMQNNSSLFKLRRGPWSPEEDKHLLELVAMFGGEKNLNWVKISQMLETRTAKQARERYHQNLKPSLNRTPITPEEGELIEELVERYGKRWAEIARHLNGRSDNAIKNWWNGGANRRKRLIDRKNTTTNNKTESDENGNTTSDNAMEMEPENERDNDVEDDKKQNDKSDEKQKEQVDVDVGPHEAPSENQAGEASDKVKVKEELKPYPLTTNSSNNSFNHLNLLPPQHSKRRSASVDFRLPPINPGSQQTSLSGLVFDTGIIGKFSTRWIEKFQGVLNWQWRSSDKFSEW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -