Drob020578.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila robusta
Gene Symbol
JARID2
Assembly
GCA_004143805.1
Location
SCDV01000219.1:47125-50273[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-22 6.7e-19 68.7 0.0 6 89 437 518 432 518 0.92

Sequence Information

Coding Sequence
GGCAAACAGAAGGCGGGCAACAGGAagcaggcggcagcagctgccacgccgccgcccaacaccaacagcagcacggcagcagcagcagcaggaggagcaacAACATCGCCAGCCAAGCGCACGCCCGTCTATCAGAGCCAAGGCAAAGGCAAGGCCCAGACGCAGGCGgagcacaagcagcagcagcagtcggcCAAGGCGGCGGAGAAGACCTCCATCTACGCTTTTGGCAAGGACGAGGAGACAACGGCCGGAGCAGCAACGACTAAGGCAGCAGCGggcgcagcaacagctgctgcagcgggcAAGGCCGCAAATCGGCGCCGCAACGCGGACACCGAGACGCAGCCGGCGCTGAGCGAACGCTCGCCGACGAAGAAACGCGCGgctgccgcagcggcggccacAGCGGTGCAACTGACGCTCAGTCCGACGGACAAGCTGGAGAAGCCcaaggcggcggcagcagcagcgcgcaagaagcagcagcagcagcaacaacagcagcagaagcaggcaacggcagcagcagctgctgccgccagcgCAGGCGGAGACTCGGATGCGGAGGGCGCCACCTTCTACATACCGCTGCTGCAGGGCGCCAGCGGGGCCGACGGTGGCATACAGGGCGTGGCCGTCAAGCTGGGTCGCGAGGGGCCCGACGGGCCCAACCAGAAGGTGGTCATGCAGGCGACGCTGGTGACCAAGGCGCAAATGGACACCAACTCGAAGCCGCTGCCCGACAACGAGCTGGTCAAAACGCTGCTCAACGCGGCCACGACGAGCGAAGCCAACGCCACGGCCACCACGGCCAGCAGCACCATGAAGGCGAGCAcctcggcagcagcagcagcagcggcagcggcggcagcagcagctgcggcagcagcaggaacaactACGGCCGCCGCCAGCACCCTGGTGCGCGTCAATTCCAATTCGTCGCTCTTCTCCGGCTCGGCCAAGTCGcgcacggcggcggcggcggccgcgaCCACCGCCCTGGCCAAGAAGTACAAGGACGACACGCCCATTAAGATGGCCAACAATACGGCATTCCCGCGCCACGACGATCCCACGCAAATGGTCGAGGCGCCCATTTTCAAGCCCACCGAGAAGGAGTTCGCCGATCCCATAGAGTTCATTGAGCGCATCACGCCGATTGCCGCACGCTTCGGCATCTGCAAGATCATACCGCCGGCGAGCTTCAAGCCCGAGTGCCGCATCTCGGACGAGATGCGCTTCACGGCCTACAATCAGTATGTGCACAAGATGCTGCATCGCTGGGGGCCCAGCGCCAAGGAGCTGAGCGCGATCAAAAAGTATTTGGCCACACAGAGCATCGTGATGAACCATGCGCCCTGGATTGGCGGCATGGAGGTGGATCTGCCGCGACTCTATCACACGGTCCAGGAGCTCGGTGGCCTCAAAGAGGTCATCGAGAAGAAGAAGTGGGCGCGCGTCGCCGAGGAGATGTGCATACCGAAGCTCGCCCAGGATCGTGTCACCAAACTGGATGACATCTACTGCAAGTACTTGTTGCCCTACGACACCCTGTCGCCGGCGGAGCGCCAGAAGCTCTTCGACGAGGTCGAGGCGGATTGGGCGAAGCGGGAGGCGCGCGCACGTCGCAACGCGGATCGTTTTGTTAACAGCACGGAGAGCGTTTCCAACGAGGAGGACGATGTGTCCACCGACGAGGATGAGGAGTCAGAGGAGGAGATCGACGGCGTCTCCATGGAGTGCATTGTCAAGGGGCGCAGCATGGCGCTCAGCCAGTTCTATCGCATAGCACGCAACACGATGGCGCTCTGGTTCAAGAGCACCGATCCCACGGTCAACGAAGTGGAAGCGGAATTCTGGCGTCACGTGGCCGTACGTGACAGTCACGTGTGCGTGCATTCTGGCTCCATTGATAGCTCCGGCTGGGGCTACGGCTTTCCCAGTCCGGGACCCAAGGGCAAGGGCTCGAATTATGCACGCCATCCGTGGAACCTCAAGGTGCTGACCAACAATGCGGGCTCGGTGCTGCGCTCGCTGGGACCTGTGATGGGCGTCACTGTGCCCACGCTCCACGTAGGCATGCTGTtctccgcctgctgctggtacCGTGATCCGCACGGCCTCTCATGGATCGAGTATCTGCACACAGGCGCCTCGAAGCTATGGTACGGCATACCCGACGACCAGAGCGCCAATTTCCGGGCGGCGCTCACGTCCCTGATTCCGACGCACTGCCAGAACAAGACAATCTGGTTGCCCTGTGATACGGTGATGGTGCCACCGCACATGCTCACCGATCGCGGCGTCTCGCTATGCCGCATCGAGCAGAAGCCCGGCGAGTTCATTGTTGTCTTTCCGCGCGCCTACACCTCCAGCCTGGCCACGGGCTATGTGGTCTCGGAGAGCGTTTATTTCGCCACCATGTCGTGGCTGGATTTGGCCAAGGATGATTTCAGGGACATCCATGAGAGCTGTGAGCCGGCCATGTTctcgctggagcagctgcttttCGCCCTGGGCTACGATCAGCGCGTCAATTCGGACACGTTGCAACAGATGCTGCCCATGCTGAACGAGGTCTGCGAAAAGGAATCGGCGGCACGTGAGCAGCTCAGAGCCGCTGGCGTCACATCCACCGAAAAAGTGCAGGCGGAGAAGGGTCAGAAGGCgaagaagcaacagcagccgccataTAAATCAATTGAGAGCGAATGCGATCTGTGCCGCGCCAATCTGTATATATCGATGGTGCGCACCGAGGAGGGCAACGTTTACTGCTTGCAGCATGCGCTCAAAAATCTCAACAATGGCAATATTCAGGCCAAGCAATGCAAACTGATTTATGCGTACAATGTGGATGACATACAGCAGCTGATCCGACAGCTGCAGGAGAAGATTCAACACAAGGCGGCCGTTAAGAAAAAGTAG
Protein Sequence
GKQKAGNRKQAAAAATPPPNTNSSTAAAAAGGATTSPAKRTPVYQSQGKGKAQTQAEHKQQQQSAKAAEKTSIYAFGKDEETTAGAATTKAAAGAATAAAAGKAANRRRNADTETQPALSERSPTKKRAAAAAAATAVQLTLSPTDKLEKPKAAAAAARKKQQQQQQQQQKQATAAAAAAASAGGDSDAEGATFYIPLLQGASGADGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPDNELVKTLLNAATTSEANATATTASSTMKASTSAAAAAAAAAAAAAAAAAGTTTAAASTLVRVNSNSSLFSGSAKSRTAAAAAATTALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNEEDDVSTDEDEESEEEIDGVSMECIVKGRSMALSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLQQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMVRTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIQHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-