Drho006629.1
Basic Information
- Insect
- Drosophila rhopaloa
- Gene Symbol
- kn
- Assembly
- GCA_018152115.1
- Location
- JAECXI010000115.1:11665676-11694184[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-235 6.6e-231 767.6 0.0 39 385 59 433 38 437 0.98 2 2 1.5e-07 0.0025 16.1 15.6 422 519 436 533 433 551 0.63
Sequence Information
- Coding Sequence
- ATGGAGTGGGGCCGGAAGCTGGGCTATCCCAGCGGCGTTTCCGGTCCGCGATCCGCCGGCAGCCTGATGTTCGGCCTTCCGCCAACCGCCGCCGTCGACATGAACCAGCCACGTGGACCGATGACCTCACTGAAGGAGGAGCCGCTGGGCAGCCGGTGGGCCATGCAGCCAGTCGTCGATCAGACCAATTTGGGCATCGGCCGCGCCCACTTCGAGAAGCAGCCGCCGAGTAATTTGCGCAAGTCGAACTTCTTCCACTTCGTGATCGCCTTATACGATCGGGCTGGCCAACCCATCGAGATCGAGCGCACGGCCTTCATTGGGTTCATCGAGAAGGACTCGGAATCGGATGCCACCAAGACGAACAATGGCATCCAGTACCGGCTGCAATTACTCTATGCAAATGGAGCTCGCCAAGAGCAGGACATTTTCGTGCGCCTCATCGATTCGGTGACCAAGCAGGCCATCATATATGAGGGCCAGGACAAGAATCCCGAAATGTGTCGAGTACTTTTAACGCACGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGCTTCTTTCTCAAGTTCTTCTTGAAGTGCAATCAAAACTGTTTGAAAAATGCCGGAAACCCGCGGGACATGCGCAGATTTCAGGTGGTGATCTCCACGCAGGTGGCCGTGGATGGACCACTTCTGGCCATCTCCGACAACATGTTCGTGCACAACAACTCGAAGCACGGACGGAGGGCCAAGCGGCTGGATACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCACCGCTGCCAGTGGCCACGCCCTGCATCAAGGCAATCTCGCCCAGCGAAGGCTGGACAACCGGCGGCGCCACCGTGATCATTGTGGGCGACAACTTCTTCGACGGCCTGCAGGTGGTGTTCGGAACCATGCTGGTCTGGAGTGAGCTGATCACCTCGCACGCGATCCGGGTGCAGACCCCGCCGAGGCACATTCCCGGCGTGGTGGAGGTGACGCTATCCTACAAGAGCAAACAGTTCTGCAAGGGATCGCCCGGTCGCTTCGTCTATGTCTCTCTCAACGAACCCACAATCGACTATGGTTTCCAGCGCCTGCAGAAGCTCATTCCCCGGCATCCCGGCGATCCGGAGAAGCTGCAAAAGGAGATAATCCTCAAGCGGGCCGCCGATCTCGTCGAGGCCCTGTATTCCATGCCCAGATCCCCGGGCGGCTCCACGGGCTTCAACTCCTATGCCGGCCAACTGGCGGTCAGCGTGCAGGATGGCTCTGGCCAGTGGACCGAGGACGACTACCAGCGGGCCCAGTCGAGCAGCGTGAGTCCACGGGGCGGCTACTGCAGCAGCGCCTCCACGCCGCACAGCTCGGGAGGATCTTACGGCGCCACGGCGGCCAGTGCAGCGGTGGCGGCCACGGCAAATGGCTATGCACCTGCTCCCAACATGGGCACACTCTCCTCATCGCCCGGCAGCGTCTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCACCACGCGGCGACGGCCCACCCGCACCACCACTACCCACATCCCCACCAGCCGTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGTCGTTTAA
- Protein Sequence
- MEWGRKLGYPSGVSGPRSAGSLMFGLPPTAAVDMNQPRGPMTSLKEEPLGSRWAMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAATAHPHHHYPHPHQPWHNPAVSAATAAVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -