Drel010226.1
Basic Information
- Insect
- Drosophila repletoides
- Gene Symbol
- grn
- Assembly
- GCA_018150835.1
- Location
- JAECWQ010000100.1:3680717-3706712[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-20 2.5e-16 58.9 4.7 1 35 57 90 57 91 0.98 2 2 3.1e-19 8.9e-16 57.1 6.3 1 35 117 150 117 151 0.97
Sequence Information
- Coding Sequence
- ATGGCCACTGACGCCAAATGTCAAATCAAGCGGCGTACACACCAGGGGCAGCAGGCAGCAGGCAGCAGTACGAGTAGTTGTCGCCGTCGTCGTCTCCGACTGGTTGCTGTTGGCTGGGCTCTTGTGTTGCCTTTGTTGTCAAAAGTGGGCACAGTGGAGGGTCGAGAGTGCGTGAATTGTGGTGCCACCTCCACACCGCTGTGGCGACGCGATGGAACTGGACATTATCTGTGCAATGCCTGTGGCCTCTACTACAAAATGAATGGACAGAATCGGCCGCTGATCAAGCCAAAGCGAAGACTGACGCTACAGTCGCTGCAGAGCGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGGCGCAATGCCAGCGGTGAGCCCGTATGCAATGCCTGCGGATTATACTACAAGCTGCATAATGTCAATCGTCCACTTACCATGAAAAAGGAGGGCATACAAACGCGTAATCGCAAGCTCAGCTCCAAGTCCAAAAAGAAAAAGGGTTTGGGCGGCGGCTGTCTGCCAATGGGCGGCCATTTGGGCATGGGCGATTTCAAGCCACTCGATCCGTCCAAGGGCTTTGGCGGCGGCTTCTCTGCATCCATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCACATGCGCATATGCATGGCAGCTGGTATACTGGCGGCATGGGCGCATTGGGCGCCTCCGGTGGATTACAGGGTGGCTTCTCTACGGCCGGCTCTCTGGGCGGTGGGGTAGTGCCCCACTCCCAGCCCTATCACTTGGGCCTCAGCTCCATGCGTTGCGATAACGTTGGGGCCTTTGCCTCCCTGCTGCCATTGGACTCCCTGTTCCTGGTTCCCCTGCTCCTCCTGGGTCAGGTCCTCTTCTTCCTTTTGGCCATGGTTTGTGAGCTCGTGCGTTTGGTTGCAAGCTTATCTGATTGGAAATGTATGGCCAACAATGGCGACACACAGCAACGGCCACGCACACAAATACAGACACACGGACTCGGACACGGACACGGACACGGACTCTGA
- Protein Sequence
- MATDAKCQIKRRTHQGQQAAGSSTSSCRRRRLRLVAVGWALVLPLLSKVGTVEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMRCDNVGAFASLLPLDSLFLVPLLLLGQVLFFLLAMVCELVRLVASLSDWKCMANNGDTQQRPRTQIQTHGLGHGHGHGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -