Basic Information

Insect: Drosophila repletoides
Gene Symbol: -
Assembly: GCA_018150835.1
Location: JAECWQ010000213.1:1579512-1584856[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0019 0.13 12.7 0.9 1 23 215 237 215 237 0.96

2 26 0.86 60 4.3 3.2 1 16 243 258 243 265 0.81

3 26 0.019 1.3 9.6 1.4 2 23 297 318 296 318 0.97

4 26 0.0037 0.25 11.8 1.4 1 23 389 412 389 412 0.93

5 26 0.15 10 6.7 1.4 1 22 420 441 420 441 0.96

6 26 9.4 6.5e+02 1.1 0.6 1 20 450 469 450 471 0.91

7 26 1.8 1.3e+02 3.3 2.7 1 23 482 504 482 504 0.93

8 26 0.024 1.6 9.3 1.6 1 23 573 596 573 596 0.95

9 26 0.027 1.9 9.1 0.1 3 22 607 626 605 626 0.93

10 26 2.1 1.4e+02 3.2 5.2 1 23 635 657 635 657 0.97

11 26 0.00028 0.019 15.3 0.3 2 23 693 714 692 714 0.97

12 26 4.8e-05 0.0033 17.7 4.2 1 23 722 744 722 744 0.99

13 26 0.14 9.9 6.8 2.9 1 23 891 914 891 914 0.94

14 26 0.052 3.6 8.2 1.7 2 22 922 942 921 942 0.95

15 26 0.14 9.7 6.8 0.8 1 23 951 974 951 974 0.90

16 26 2.8e-05 0.002 18.5 1.3 1 23 1000 1022 1000 1022 0.97

17 26 0.00014 0.0095 16.3 1.2 1 23 1029 1051 1029 1051 0.98

18 26 0.0097 0.67 10.5 0.0 2 21 1078 1097 1077 1098 0.94

19 26 0.0044 0.3 11.6 3.4 1 23 1143 1166 1143 1166 0.96

20 26 0.001 0.07 13.6 0.7 1 23 1203 1226 1203 1226 0.96

21 26 0.00035 0.024 15.0 1.9 1 23 1249 1272 1249 1272 0.97

22 26 1.3e-05 0.00088 19.6 0.1 2 23 1294 1315 1293 1315 0.95

23 26 0.0001 0.0072 16.7 2.3 1 23 1321 1343 1321 1343 0.99

24 26 3.6e-06 0.00025 21.3 2.0 1 23 1349 1371 1349 1371 0.97

25 26 1.4e-07 9.6e-06 25.7 2.8 1 23 1377 1399 1377 1399 0.99

26 26 0.00068 0.047 14.1 0.4 1 21 1405 1425 1405 1429 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0019	0.13	12.7	0.9	1	23	215	237	215	237	0.96
2	26	0.86	60	4.3	3.2	1	16	243	258	243	265	0.81
3	26	0.019	1.3	9.6	1.4	2	23	297	318	296	318	0.97
4	26	0.0037	0.25	11.8	1.4	1	23	389	412	389	412	0.93
5	26	0.15	10	6.7	1.4	1	22	420	441	420	441	0.96
6	26	9.4	6.5e+02	1.1	0.6	1	20	450	469	450	471	0.91
7	26	1.8	1.3e+02	3.3	2.7	1	23	482	504	482	504	0.93
8	26	0.024	1.6	9.3	1.6	1	23	573	596	573	596	0.95
9	26	0.027	1.9	9.1	0.1	3	22	607	626	605	626	0.93
10	26	2.1	1.4e+02	3.2	5.2	1	23	635	657	635	657	0.97
11	26	0.00028	0.019	15.3	0.3	2	23	693	714	692	714	0.97
12	26	4.8e-05	0.0033	17.7	4.2	1	23	722	744	722	744	0.99
13	26	0.14	9.9	6.8	2.9	1	23	891	914	891	914	0.94
14	26	0.052	3.6	8.2	1.7	2	22	922	942	921	942	0.95
15	26	0.14	9.7	6.8	0.8	1	23	951	974	951	974	0.90
16	26	2.8e-05	0.002	18.5	1.3	1	23	1000	1022	1000	1022	0.97
17	26	0.00014	0.0095	16.3	1.2	1	23	1029	1051	1029	1051	0.98
18	26	0.0097	0.67	10.5	0.0	2	21	1078	1097	1077	1098	0.94
19	26	0.0044	0.3	11.6	3.4	1	23	1143	1166	1143	1166	0.96
20	26	0.001	0.07	13.6	0.7	1	23	1203	1226	1203	1226	0.96
21	26	0.00035	0.024	15.0	1.9	1	23	1249	1272	1249	1272	0.97
22	26	1.3e-05	0.00088	19.6	0.1	2	23	1294	1315	1293	1315	0.95
23	26	0.0001	0.0072	16.7	2.3	1	23	1321	1343	1321	1343	0.99
24	26	3.6e-06	0.00025	21.3	2.0	1	23	1349	1371	1349	1371	0.97
25	26	1.4e-07	9.6e-06	25.7	2.8	1	23	1377	1399	1377	1399	0.99
26	26	0.00068	0.047	14.1	0.4	1	21	1405	1425	1405	1429	0.91

Sequence Information

Coding Sequence: ATGTTGTCAAATGATATTTGCCGCACGTGTGCGCTTCAAGATGGCAATCTACTGCCGCTTTCTACACACGGCGAGAAATACGCAGTTAAAAGTTTCTGCGACATGTTGCACGCATTAACACAGAATGATCCGTTGCTGGAACAGACAGACGATAAACTGCCTCAGTTTGTGTGTCGCAACTGCAGTCGCCAGCTGGAGGCAGCCTTTGGATTCGTGTTGCAGGTGCGTCAGGTACACGAGCAATTGTTGCGTTTGCTGCAGCGGCAACAATTGCAGTCACAGACGCAATGCCTGGATGAGACGCCCATTGATATAAGCATGCAGCACATAAAGACAGAAATAGAGCCAGATAATTGCCTGGAGCAAGACGTGGAAGCTGATCAGGGTGAAGTTGCTGCAGCTTTGAAGTGGCAGCCAGAAACTACTGATAGCGACACCAACCTGCAAACAGCACAGACCGCTAACCATGATGTGGATTACAACCCTAACCAGCAGCTGCGGCGCAGCACTCGCAAGACCAAGCTTGCCACAGACAGCGAACATGATACGACCTCTGTCAATTCTCAGGCCGTGCCACCCAAGCGTCGACGCGGTCGTCCGCCGCGTGTACCTAAAAAGGAAGCCATAAGCGAGGATGGACGTCATATATGCGAGGTGTGTGGAAAAACGTTCTCTTGGTATCGAGACATGCAACGCCACGCCAAGATACACTTTGAGCAGGCGGCCTATGAGTGCGGCACCTGTGGAAAGAGTTTTCTACGCAAGGATAAGTACATGTTTCATGTGCGCTGCCATGAGAAGAGAGAGGCCAAAAGCCAAGCGCTGCAGCTTAGCAGTGAATGGAGATTCGCTGAGCGACTATACAGCTCGGGGCGTCTTAAACGAATCGAGTGCAAGCTGTGCGGCTTGAGGTGCCAGCGCATACAGGAGCTTCGGGAGCATCTAAAGAGTCACGACAACCTGGAGAGCTTGGCCCAGTTCAGCGCGCAAAGCGATGTCAGCAGGGAGCTATTTCCTGGTCGACAGCTGTTGCAAATCAAGAAGCAGGTATGTCTGGACATTGCACAAGGGAAACTTAACAAGTACTATGTGGTGATCAATGCGCATGGCTATGAGCTGTGTCTAAGCGACTCAGATGAGGAGCCTGCTGATCAGGAACCACGTTATCAGTGCTTGCCGTGCAATACCTCTTTTACACGCAAATATCGCCTCATGCGGCACACGCTGGAGGAGCACACACAGGCTGAGGCTTCCTTGCACCGTTGCAACCTTTGTCAAATTGGCTTTGTGTGCCCCAAGCTGCTGGAGCAGCATCAACGCACGCAGTGCAAGAGCTCCTTAAAGCGCTACAGTTGCTCCAGCTGTCCAGGCAAATTTATATGGCAACAGAGTCTGCAACAACACGCCTGTTCTCAAGCTCTCCAGAAGCAGGATAATCGTCATTTTCTGTGCTGCCTGTGCGATGAGCAGTTGCCGAGCATGTCTAAACTCAGAGTGCACTTGCACCAACATAGCGATGGTTGCAGCGGCATAGATCAGTCTCAGTCTGCAGCGTTTTTCAGGAACTATCAAATCGAAGGCAGCTCGGCGGAGCATATAGCACGAGATTTTGAGGAACATGATTATGGACGTTACTTTAATGCCTGCAACAGCAGCGGTCAGGAGCTCGATTTCTATGACTCGGACACAAATTCCAGCGATGTGGAGCAGCAGCATCATACATGCACCTTATGTGGCTATTCCGCTCAGCGTCGGACTCAACTGTTATTGCATCAGCAGGAAAACCATTCTGAGCTGGATGGTGCACTGCCTCATCTTTGCGATGGTTGTGGACTAAGCTTTGTGGCTGAGCCGCTGCTGCAACAACACCGTCGACGCGTTTGTGGTAAAAGGCACGTCAAGTTCCACTGTCAGCGCTGTAACCTGCACTTTATATGGCAAACCAACTATGATCGGCACATGCAGCTACACGTATTGGAGGAGGAGGACGCGGAGGCCGAGGCAGAGACCGAGGATGGCCAGGAGCAGTTGCCTCGCACCAGGCTTAGAAGCAAACGCCAAACAGCTGCAAAGCTGCAGTGCAGTGAGTGCGAAAAGGTTTTCATCTGGCCCAAGGATCTTACACGACACAAACGCATTCATCAGCCGCACGCAGAGGCGCAATACAAATGCTCGTTCTGTGAGCGCAAATTCCATCGCAAGGATGGTCTCAAGTCGCATATACGGGTGCACGGCGAGCAGCAGCTGGAGGCGACAACAAATGCAACTAAAAGTTACCCTCAGGAGCGAATGCCGGTGGTGCTGACCCAATTGTGTCGACCCAATGGCTGTAAGCAGATTCAATGCATGATTTGTCTATCGCGGCATACAAGAATCTCTGATTTGAGGACGCACTTGGTTACCCATCAATATAGCGTAGAGTTTGTGAAGGAGCGTGCTCAACTGGAGAGCATAGCCGGAATATCACGTACGCTCTATCCCGAGCTGAGCACAACGCTCAACAAACTAGAACTGATTGAGCGCATACAAATCGATGTGCGCAAGGGCGAAGAGTTGGAAAGATTTGTTTGTATAACCAACGAGGCGGGCGTAGAGCTGAGTTTAGACAGCAGCGAAACGGATACAGATTCGGAGACAGAGCAAAGCAGCAGCAACAGTTCAAGGCAACTATACCGCTGCGAGCTTTGCCAGCTTCAATTGCCACGCAAGCATCAGCTCTATGCGCATCACCTGGAGCGGCACAATTGGCAACAGGCGAAACAGAGGTGTAGCCACTGTCAGGCTAGATTTGTTAGTGAGCAGCTTCTGGATCATCATTATCGCACGCTTTGCCGCAATACCCAGAAGCAGTTTCTTTGCCGCAAATGTCCCATGCGCTTTCGGTGGCGTGAAAATCTTAAGCTGCACACGAGTTTAGCTCACCTAGAGGTTGGAGGAGGGCCGTCATCGCAACCAGTCGTGACAGTGAATGGGTCTAGTCTTCTACCTGTTGTCAGCTATGATTGCGTGGAGTGCAATCGCAGTTTCAAGATGCAAAAGGATCTCACGCGGCACACGCTGATGCATGCTCAAGAATCGAGTATCTATAGATGTCGGTGGTGTGCTAGACGCTTCTATCGAAAGGCTAATCTGTTACAACACATAGAACGTCATGGCATCAGTGCAGAGCAGCTGCCCTACGCGGAAACATTGCTCAGTGTAAGCCGGCATCCACATGGTCAGAAGTGCATTCAGTGCAGGGTGTGTCAGTTGAGCTTCTCCAGCATTACTGCACTGCGTCAGCACATATTAGCTGCGCCAAATGGCACACATCATCCAAGTGATTCCATGCTTAACTACTCCATAACCAATCAGCTCGGGTATGAATTACACCTGGAGGATTCGGAGACTGATGAAGAGACCAAGCCGGAGGGCACTCCCACACACTATACCTGCGGCATATGTCAGCTGCGGTGTGTGCGCAAGTATGAGCTACATCAACATCAGCAGGCCATGCATCGCGTGGAGCGGATTAGCGACAGTTGTGGCCTATGCATCTTCAAGAGCGTTTCTCCGGACCTGATAGCCTATCACCGACGTGTGCAGTGTGGCAATACTGAAAAGCAATTCAAGTGCAACAAATGTGGCTATAAATTCATGTGGGAATCCAATCTATTGCTCCATATGCAGCTAGAACATACCGGTTATGAGACAAAGGAGGAAGCGGCCCACACTGAAATTCTCAAAGATGCCGAGTCCCAGCAGTTTCGTTGCGGTCAGTGTCCACGTAAATATAATCGGAAAGATCGCCTGACAGCGCATGTTAAGAAGTATCATGCACTTGGAGCTAGTGCAGTGACCAAGTCAATTTTACCTCCAGCCAAGCAACAAAAGAGTTTCCTATGCGCTTTCTGCGGCAAGGCGGTGAGTTCCTCTTCCAATTTGATTATACACATTCGTCGCCATACTGGAGAGAAGCCGTTTAAATGTGACCTCTGCGACATGGCCTTTCCACGCTCCTCTGATCTCCAATGTCACCGACGCACTCACACTGGCGAGCGTCCTCACATCTGTACCGTTTGCCAGAAGGGTTTCGCCCGGTCCTACAAGTTGCAGCAGCATATGCGCATTCACAACGGAGACCGTCCCTATAAATGCACCTATTGTGACAAGAGGTTCACCCAGTCCAATGATCTGACTCTTCACATAAGGCGCCACACAGGTGAACGCCCATATCAGTGCAACACCTGTGGAGAGAGGTTCATTCAAGGCACAGCTCTCAAGAATCATCGACTCCAGTATGGTCATTACGAGTCGGAAGAGGTCCCACCTAAACGCGACTAA
Protein Sequence: MLSNDICRTCALQDGNLLPLSTHGEKYAVKSFCDMLHALTQNDPLLEQTDDKLPQFVCRNCSRQLEAAFGFVLQVRQVHEQLLRLLQRQQLQSQTQCLDETPIDISMQHIKTEIEPDNCLEQDVEADQGEVAAALKWQPETTDSDTNLQTAQTANHDVDYNPNQQLRRSTRKTKLATDSEHDTTSVNSQAVPPKRRRGRPPRVPKKEAISEDGRHICEVCGKTFSWYRDMQRHAKIHFEQAAYECGTCGKSFLRKDKYMFHVRCHEKREAKSQALQLSSEWRFAERLYSSGRLKRIECKLCGLRCQRIQELREHLKSHDNLESLAQFSAQSDVSRELFPGRQLLQIKKQVCLDIAQGKLNKYYVVINAHGYELCLSDSDEEPADQEPRYQCLPCNTSFTRKYRLMRHTLEEHTQAEASLHRCNLCQIGFVCPKLLEQHQRTQCKSSLKRYSCSSCPGKFIWQQSLQQHACSQALQKQDNRHFLCCLCDEQLPSMSKLRVHLHQHSDGCSGIDQSQSAAFFRNYQIEGSSAEHIARDFEEHDYGRYFNACNSSGQELDFYDSDTNSSDVEQQHHTCTLCGYSAQRRTQLLLHQQENHSELDGALPHLCDGCGLSFVAEPLLQQHRRRVCGKRHVKFHCQRCNLHFIWQTNYDRHMQLHVLEEEDAEAEAETEDGQEQLPRTRLRSKRQTAAKLQCSECEKVFIWPKDLTRHKRIHQPHAEAQYKCSFCERKFHRKDGLKSHIRVHGEQQLEATTNATKSYPQERMPVVLTQLCRPNGCKQIQCMICLSRHTRISDLRTHLVTHQYSVEFVKERAQLESIAGISRTLYPELSTTLNKLELIERIQIDVRKGEELERFVCITNEAGVELSLDSSETDTDSETEQSSSNSSRQLYRCELCQLQLPRKHQLYAHHLERHNWQQAKQRCSHCQARFVSEQLLDHHYRTLCRNTQKQFLCRKCPMRFRWRENLKLHTSLAHLEVGGGPSSQPVVTVNGSSLLPVVSYDCVECNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRKANLLQHIERHGISAEQLPYAETLLSVSRHPHGQKCIQCRVCQLSFSSITALRQHILAAPNGTHHPSDSMLNYSITNQLGYELHLEDSETDEETKPEGTPTHYTCGICQLRCVRKYELHQHQQAMHRVERISDSCGLCIFKSVSPDLIAYHRRVQCGNTEKQFKCNKCGYKFMWESNLLLHMQLEHTGYETKEEAAHTEILKDAESQQFRCGQCPRKYNRKDRLTAHVKKYHALGASAVTKSILPPAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDLCDMAFPRSSDLQCHRRTHTGERPHICTVCQKGFARSYKLQQHMRIHNGDRPYKCTYCDKRFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRLQYGHYESEEVPPKRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -