Basic Information

Gene Symbol
osa_1
Assembly
GCA_018150835.1
Location
JAECWQ010000202.1:1712197-1737867[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3 6.5e+03 -2.4 0.1 13 46 616 652 611 654 0.80
2 2 6.8e-25 1.5e-21 76.5 0.0 3 89 865 951 863 951 0.92

Sequence Information

Coding Sequence
ATGAATGAGAAAATAAAATCACCCACACAGCAGCAACAGCAAGCGGGCGGTGCTGTTGGTGGTGGTTCCAGTGCTGGTGCGGCTAGTGCCGCTGCACCGCCAGCGGCAGGTGGCGCCACACCGCCCACATCAGGACCGCCAACGCCAAATAATGGCAATGGCAACGGCAACGGTAATGATGCTAATATGCAACAGCAAGGCGTCGGCGGCGGCGCAACTGTACCACATCCCTATGGTGGTGGACCACCGCCGCCAGGTTCAGTGCCACCCGGTGCACCACCCGATGCTGCCGTAATGTCCCACTATCACCACATGCACCAACAACAACAGCAGCAACAACAACAACATCCACCATTGCCACCACATATGCAACAGCATCACGGTGGACCACCGCCAGGGCCGCTACCAGGTGCACCACCTGATGTTAAGGATGATTATGGTTCTGCACATTTGCCACCACCTCCGGGACATCCACACGCACATCCTGCCTATGCGCGATATCATTCGGGCGATCCTAATATAGATCCCTATCGCTATGGCCAACCGCCGCCAGGCAGTAAACCACCACAGCCGCCCCATCAACAACAGCAGCAACAACAACAGCCGCAGGGCCCAGGTGGTTCACCGAATCGTCCGCCACAGCAGCGTTATATACCAGGACAACCGCCGCAGGGCGGTTGGGCACCGCCCCCAAGACCCTACAGCCCACAGCTGGGTCCCTCGCAACAGTATAGGACACCTCCACCGACGAATACTTCCAGAGGTCAATCACCATATCCATACCCAACACCGCCAGGTTTACCAACAGCCGGGCCCAATCATCGGACTGCCTACACAACGCACCAATATCCCGAACCAAATCGACCCTGGCCCGGCGGCTCATCACCTAGTCCTGGACCTGGCCATCCATTGCCACCTGCCTCACCGCATCATGCGCCACTGCAACAACCGCCTACGCCGCATTCCGCCGCTGGTGGCCCGCCACCCAGTAGCAGTCCGGGGCATGCGCCGAGTCCATCGCCGCAGCCCTCGCAAGCATCACCATCACCGCACCAGGAGTTAATTGGACAAAATAGCAACGATAGTTCTAGTGGTGGTGCACACAGTGGTATGGGTTCGGGTCCACCCGGTACTCCTAATCCACAGCAAGTCATGAGGCCCACACCTTCACCCACTGGCTCCTCGGGCTCCCGGTCTATGTCTCCTGCAGTGGCACAAAATCATCCAATTTCGCGTCCGGCGAGTAATCAGTCAAGCAGTGGGGGTCCAATGCAGCAGCCAGCAGTGGTCGGTGGTCCACCACCGATGCCACCGCATGGACTACCAGGTGGGCCACCATCTCAGCAGCAATCTCAGCAGCAGCAGGCTTCAAATTCGGCATCGTCGGCGAGCAATTCGCCACAGCAGACGCCACCACCAGCACCGCCGCCAAACCAAAATGTTAACAACATGGCAACTCCACCACCGCCACCACAAGGCTCGACAGGTGGTTATCCCATGCCACAGCATATGCATAGCAGCTACAAAATGAGCGGACCAGGACAAAGTCCCGGAGCTCAAGGGTATCCGCCACAACAATATCCACAAGGCAATTATCCACCACGCCCACAGTATCCAGGTGGCGGGTATGCAACTGGTCCACCACCTCCGCCAAGTAGCCAAGCCGCTGGCGGAGCCAATAGCATGTCATCCAACGCACAACCCGGCTATCCACGTTCAATGCCCAACCACAGTGGTGGCAGTCCACATCCACAGTATCCACCATATCAGTGGGTGCCGCCATCGCCTCAACAATCGGTGCCTGGTGTCGGTTCAGGGCAAATTGGCGCAACGATGGGCAATCACGTGCAAGGCAAGGGCACACCACCACCCGTTGGACCGCCACCACCACAGGGCAGTGGTTCGCCACGTCCATTAAATTATCTGAAACAGCATTTACAGCACAAAGGTGGCTATGGTGCCAATCCAGCAGCAGGACCACAGCCTCAGGGTTATGGCAATGGACCCACTGGTATGCATCCGGCAATGCCCATGGGCCCACCACATCATATGGGTCCACCGCAGAGCATGGGACCACCCACCAGTACGCCACCACAATCAATGTTGGGTGGTGCCCAGCCTGGCAGTGACCCGGGAGTGCCAGAGCATATATCCCAGGATAATGGTATTAGCTCCTCCGGACCAACGTCAGCCCCTGGTATGCATGCTGCAGTTACCTCAGTGGTTACAACTGGACCGGATGGTACACCAATGGATGAAGTCAGCCAACAGAGCACGCTCTCAAATGCCTCAGCTGCATCGGGCGAAGATCCACAATGTACTACACCAAAGTCGCGTAAACATGATCCATACAGCCAAAATCATTTAGCACCACCAAGCACTTCGCCACATCCTGCTGTCATGCATGGTGGTCCATCTGGCGAGGAATACGATATGAATTCGCCACCCAATTGGCCGCGTCCAGCTGCCAGTTCGCAGGTGTTTAACAGTCATGTTCCTGTACAACAAGAACCATTTCGTAGTACCATAACCACTACGAAGAAGTCGGATTCGCTATGCAAACTATACGAGATGGATGAAAATCCGGATAGGCGTGGTTGGCTGGATAAGCTGCGATCTTTTATGGAGGAACGTCGGACACCAATAACAGCGTGTCCGACCATCTCAAAACAGCCACTCGATTTATATAGGTTATATATTTATGTAAAAGAACGTGGCGGATTCGTCGAGGTATGCAAGGTGACTAAGAGCAAGACCTGGAAGGATATTGCTGGTCTGCTCGGAATCGGCGCTAGCAGCAGCGCTGCCTATACACTGAGAAAACACTATACAAAGAATCTGTTAGCATTCGAGTGTCACTTCGATCGGGGAGACATTGATCCATTACCCATAATACAACAAGTGGAGGCCGGTAGCAAGAAAAAGACAACGAAGGCAGCATCTGTGCCATCACCAGGATCATCGAACTCGCAGGATTCTTTCCCAGCACCACCTGGTGGCGCACCAAATACATCAATTGATGGTTATACGGGTTATTCTGGCGGCGGTGCATATCCAACTCCAGCCGGTCCGCAGCCAGATTATGGTCCAGCGGGTCAGATACAAAGGCCTCCATCACAAAGCAATCCCCAGGCACCACATCCGGGCACACAAAATCAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGTCACACGGTGCCCCTCCTCCACCGCCCCCACATTCACCGCACACAGCGCCACCACAACCGAACAATCAACAACAACAACAACAACCACATCACCAACAACAACAACAACAAGGCGGCATACCACCAACACAGTTGCAGCCGCCGCCGCAAACACAGTCGCAACAACAGCAACAGCAACCAGCGGCACCACCAGTACCACCACAGCAACATGGGCCACCATCGACGCAGCATGCGCGCCCTGCAACTGGAGTACCTTATCCACAGGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGGCTCTCCGTATCCAACTCAACCTGGTGCTTATGGTCAATACGGTTCAGGCGATCAGTATAATGCGGCTGGGCCACCTGGCCAGCCATTTGGAGCAAATCAGGGACAATATCCGCCACAGAATCGCAATATGTATCCTCCCTATGGACCAGAAGGGGAAGCTCCTCCAGCTGGTGCTAATCAGTATGGTCCCTATGGCAGTCGACCCTATAGTCAGGCACCACCCGGTGGACCACAGCCACCAGCGCAAGCCGTTGCAGGCGGACCACCAGCCAGTGGGGCGCCAGTAGCACCACCAAACAGTGGCTATGCACCAGGCACACCCAATCAGCAGGATTATTATAGACCGCCAGATCAGAGTCCCCAACCGCGACGGCATCCTGACTTCATTAAAGACTCACAGCCTTATTCTGGATATGCTGCGCGGCCTCAGATCTATGAGTCCACTACGCCGGTGCTGTATCGTCGGAAACGGCTGACCAAGGCGGATGTTTGTCCCGTGGATCCTTGGCGTATATTTATGGCCATGCGTTCGGGTCTGCTTACGGAATGCACCTGGGCATTGGATGTCCTGAATGTTCTATTGTTTGATGATGCCACCGTACAGTTCTTTGGTATATCGAATTTGCCTGGCTTGCTGACGCTGCTGCTCGAGCACTTCCAGAAGAATCTCGCCGAGATGTTTGATGAACGTTGCGAGGAGTCTCTTGCAGGTGAGGATCATGATGATGATGCGGATAGTGGCACAGTTATATCGATGCAATTGGAGGATAAATTGCGACGTCGTCAACCACGTTGTGTGCGCAGCATTTGCAGCTACAATCGTAAGCGGCATTATGAAAATATGGATATAAAACGGAGTAGTGAGGATTCGGATGATGCGGACGAAGGAATCGATTTGGGACAGGTGCGAGTTCAGCCAAATCCTGAAGAGCGTTCGCTGTTGCTCTCCTTTACGCCCAACTATACGCTGGTCACAAGAAAAGGTGTACCTGTGCGCATACAAACAGCGGATCATGATATCTTTGTGGATGAACGTCAAAAGTCCTGGGATATTGATACGAATAAACTGTACGAACAGTTGGAGCCGGTGGGCAGCAATGCATGGACTTATGGGTTCACGGAACCCGATCCACTCGATGGTATTATCGATGTGTTCAAATCGGAGATTGTTAACATTCCATTTGCACGTTATGTGCGCAACAAACACAAGGGAGGGGGATTAAAGACGGAACATAAGAGAAGAGAGGAGGAGGATTCAGTGGTGCTCAAGCAGGAAGAGAATACGAGCAGTACAGAGGAGAACAGCCTGCTGCAGCAGACGTACAATAAAAAACGACGACTGGTCAGCAGTGGCGGAGATATTAAAAAATCTAAGTTGGAGGAAGAAGAATTCGCACAGCCCGTCGTGGAGCTAAAGAAAGAACCTGGAACGAGTGAGGCCTGCTCTACGGACAGCGATTGCCGTGCTGTGGATATGGAAATAGAGTCTCCGCAGCAGCGCTTAACTAATGGCGTTTCCAATCCTCCCAAAGGCTTCGATCCCAAGTCTACGGTGCGGGATGAAGCGCAGGTGCTACAACGCCGCCGCGATTCCAGCTACGAAGATGAATGCTATACGCGAGATGAGGCCTCCTTGTATTTGGTTAATGATAGCCAGGATTCTTTGGCGCGTCGCTGTATAGCGCTCTCGAATATCTTTCGCAATTTAACCTTTGTCCCAGGCAACGAAACGGTGCTCGCTAAATCAACGCGTTTCCTAGCCGTGCTAGGTCGTCTCCTGCTGCTAAATCATGATCATTTAAGGCGTACGCCAAAGACGCGGAATTATGATCGTGAAGAGGATTCAGATTTCACAGATTCTTGCAGTTCCCTACAAGGTGAACGGGAATGGTGGTGGGAATATTTGATCACCATAAGGGAGAATATGCTGGTGGCTATGGCAAATATTGCTGGACACTTGGAACTCTCGCGATACGATGAATTAATAGCCCGTCCTTTGATAGACGGTCTACTTCATTGGGCTGTGTGTCCGAGTGCGCATGGACAGGATCCTTTTCCTTCATGTGGACCGAATTCCGCGTTATCCCCGCAGCGACTCGCACTGGAAGCACTGTGTAAACTCTGTGTAACAGATGCCAATGTGGATTTAGTTATAGCGACGCCTCCTTTCTCCAGGCTGGAGAAATTATGTGCTGTGCTCACACGTCATTTGTGCCGCAATGAGGATCAGGTCTTACGTGAATTCTCTGTGAATCTATTGCACTACTTAGCCGCGGCGGATAGTGCAATGGCGCGCACGGTAGCGCTCCAAAGTCCTTGTATCTCTTACCTGGTTGCCTTCATCGAGCAGGCGGAACAGACCGCCTTGGGCGTGGCTAATCAGCATGGCATTAATTATTTGCGTGAAAATCCCGATTCGATGGGCACCAGTCTCGATATGTTGCGACGTGCGGCAGGCACTTTGCTGCATCTGGCCAAACATCCCGATAATCGTTCGCTTTTCATGCAACAGGAACAGCGGTTGCTGGGCTTAGTGATGTCTCACATATTGGATCAACAAGTGGCTCTAATTATATCACGCGTGCTGTATCAGGATACACTACAGTACGAAAAGCAGCTGCCCTACCGGAAACTGAACCATTAA
Protein Sequence
MNEKIKSPTQQQQQAGGAVGGGSSAGAASAAAPPAAGGATPPTSGPPTPNNGNGNGNGNDANMQQQGVGGGATVPHPYGGGPPPPGSVPPGAPPDAAVMSHYHHMHQQQQQQQQQHPPLPPHMQQHHGGPPPGPLPGAPPDVKDDYGSAHLPPPPGHPHAHPAYARYHSGDPNIDPYRYGQPPPGSKPPQPPHQQQQQQQQPQGPGGSPNRPPQQRYIPGQPPQGGWAPPPRPYSPQLGPSQQYRTPPPTNTSRGQSPYPYPTPPGLPTAGPNHRTAYTTHQYPEPNRPWPGGSSPSPGPGHPLPPASPHHAPLQQPPTPHSAAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPAVVGGPPPMPPHGLPGGPPSQQQSQQQQASNSASSASNSPQQTPPPAPPPNQNVNNMATPPPPPQGSTGGYPMPQHMHSSYKMSGPGQSPGAQGYPPQQYPQGNYPPRPQYPGGGYATGPPPPPSSQAAGGANSMSSNAQPGYPRSMPNHSGGSPHPQYPPYQWVPPSPQQSVPGVGSGQIGATMGNHVQGKGTPPPVGPPPPQGSGSPRPLNYLKQHLQHKGGYGANPAAGPQPQGYGNGPTGMHPAMPMGPPHHMGPPQSMGPPTSTPPQSMLGGAQPGSDPGVPEHISQDNGISSSGPTSAPGMHAAVTSVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKHDPYSQNHLAPPSTSPHPAVMHGGPSGEEYDMNSPPNWPRPAASSQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDENPDRRGWLDKLRSFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGGAPNTSIDGYTGYSGGGAYPTPAGPQPDYGPAGQIQRPPSQSNPQAPHPGTQNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSHGAPPPPPPHSPHTAPPQPNNQQQQQQPHHQQQQQQGGIPPTQLQPPPQTQSQQQQQQPAAPPVPPQQHGPPSTQHARPATGVPYPQGSSGYPTPVSRTPGSPYPTQPGAYGQYGSGDQYNAAGPPGQPFGANQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGSRPYSQAPPGGPQPPAQAVAGGPPASGAPVAPPNSGYAPGTPNQQDYYRPPDQSPQPRRHPDFIKDSQPYSGYAARPQIYESTTPVLYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDATVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCEESLAGEDHDDDADSGTVISMQLEDKLRRRQPRCVRSICSYNRKRHYENMDIKRSSEDSDDADEGIDLGQVRVQPNPEERSLLLSFTPNYTLVTRKGVPVRIQTADHDIFVDERQKSWDIDTNKLYEQLEPVGSNAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYVRNKHKGGGLKTEHKRREEEDSVVLKQEENTSSTEENSLLQQTYNKKRRLVSSGGDIKKSKLEEEEFAQPVVELKKEPGTSEACSTDSDCRAVDMEIESPQQRLTNGVSNPPKGFDPKSTVRDEAQVLQRRRDSSYEDECYTRDEASLYLVNDSQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLRRTPKTRNYDREEDSDFTDSCSSLQGEREWWWEYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNSALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQDTLQYEKQLPYRKLNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-