Drep003343.1
Basic Information
- Insect
- Drosophila repleta
- Gene Symbol
- Gata6
- Assembly
- GCA_018903745.1
- Location
- JAEIGN010000233.1:1425508-1429609[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.061 1.9e+02 1.5 2.1 4 33 228 255 227 258 0.81 2 2 6.3e-17 1.9e-13 49.5 6.5 1 34 281 313 281 315 0.97
Sequence Information
- Coding Sequence
- ATGAGCGAGTTGAACGAGACGCGCGAGAGCGAGCACAGCACCAACAATAGCAACAGCGCCAGCTCTGAGACTCACATTGAGTATCAGCGGGGATCGCACCACTCGCCACATTATATTCAGATGGCACCACGGAATGTCGCCGAGATGGCCGAGCAGGTGACCAGTGCGCCGCCTGGGACGCTCGGCGATGCTGAGGCGCCCGGTGCGAATCTGTATTATGATGCGCCCGTTGTCGATGCGAGCGTGCAGGCGAATGAATCCAAGACCTACGCGGACCTGGGCAATGCCTATGCGTTTCCACCAAACTCGACGTACGGCAGCAACAACTATGCGGCGACGTTGCAGCAGGGCAACACCATCTACAGTGTGCCGGGCACAGCTCAGTTTATAACCAAAGCCGATCCCAACTTGAATCCGTTGAGGCAAACGGCTGCCGGACCGTATCAAACGATATCCTTCGTTGATGGTACGAGTGCTACAGACGGGGGCCTTTGGACTACTGCCGGCGCCGAATACCAAAATGTTTCATTTTCGAACTATCCTGCGCAGGTTATTGATGACTACTCCACGGCTCAAATGAGCGCTGGCCATTGGGCGCCCGCTGGGAGCATTAACAGCTACGATCCCAGCATGTCATCCAGTGCCACGCCCCCCACATCGCTTACCCTGCAAGAGATCAAGTGCGAGAGCTGCCAGACACCGTTCATCCGGAAGGGGTCGGACTGGCCCAATTGTCCAAACTGCACCAGCTATGTTCGGGCGCAGGCCGTTCGCCATGCACCGCAGCGCCAAAAGCCAAAGGCAGCCGCCACACCCAACAACCGTCGCAGTGGCGTCACCTGCGCCAATTGTCTAACCAACTCAACGACGCTGTGGCGACGCAACAACGAGGGCAACCCCGTATGCAACGCCTGCGGCCTCTATTTCAAGCTGCACAACATGAACCGCCCGCTCTCCATGAAGAAGGAGGGCATACAGAAGCGTAAGCGAAAACCAAAGAACAACGGAGGACCTCTGCCCCATCGGGCGCTGCCAAGCATGTCACAGGGTGTTAACCTGATGGTTAATGGCGGCCCGCTCTACCCATCCCAGGTGGGATTATCGATTAACCAGCAGAATGGCAGTCCCGAGCTGCACGATATGTCCACAACTGGCCCCGCTGGCCGAGCACATGTGGTGGCGATTGCGTTACCCCCAGTGACGACATCGGATGGCACCTTGAACATGTCCCGTCACCATGTGACTAGCGAGAGTCACTCGCCATACAGCCAGCAGCAACAACCGCAACAACAGCAGCAGCAGCAGCCTCCGGCACAGAGCCAATCGCCGCATCTGCCCAATTCGAGCACCTTAAACCGTCAGATTGCTCAGTCTGTTCCTCCCATCGAAAGTGGACGCAGCTCTAATAGCGAGCTGACTCCAAGTGTCATAACTCGCACAGGTCTGCCGGAACGTTCATCGAATAACTAA
- Protein Sequence
- MSELNETRESEHSTNNSNSASSETHIEYQRGSHHSPHYIQMAPRNVAEMAEQVTSAPPGTLGDAEAPGANLYYDAPVVDASVQANESKTYADLGNAYAFPPNSTYGSNNYAATLQQGNTIYSVPGTAQFITKADPNLNPLRQTAAGPYQTISFVDGTSATDGGLWTTAGAEYQNVSFSNYPAQVIDDYSTAQMSAGHWAPAGSINSYDPSMSSSATPPTSLTLQEIKCESCQTPFIRKGSDWPNCPNCTSYVRAQAVRHAPQRQKPKAAATPNNRRSGVTCANCLTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGPLPHRALPSMSQGVNLMVNGGPLYPSQVGLSINQQNGSPELHDMSTTGPAGRAHVVAIALPPVTTSDGTLNMSRHHVTSESHSPYSQQQQPQQQQQQQPPAQSQSPHLPNSSTLNRQIAQSVPPIESGRSSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00475610;
- 90% Identity
- -
- 80% Identity
- -